EsuBft811_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
EsuBft811_4a	EsuBft811_4a	Ectocarpus subulatus male Bft15b	gene	Scaffold_230 293234..296693 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
EsuBft811_4a-0001-exon	agat-exon-27524	Ectocarpus subulatus male Bft15b	exon	Scaffold_230 293234..294041 +
EsuBft811_4a-0001-exon	agat-exon-27523	Ectocarpus subulatus male Bft15b	exon	Scaffold_230 294874..295157 +
EsuBft811_4a-0001-exon	EsuBft811_4a-0001-exon	Ectocarpus subulatus male Bft15b	exon	Scaffold_230 295324..296034 +
EsuBft811_4a-0001-exon	agat-exon-27522	Ectocarpus subulatus male Bft15b	exon	Scaffold_230 296472..296693 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
EsuBft811_4a-0001-cds	EsuBft811_4a-0001-cds	Ectocarpus subulatus male Bft15b	CDS	Scaffold_230 293234..294041 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
EsuBft811_4a-0001	EsuBft811_4	Ectocarpus subulatus male Bft15b	polypeptide	Scaffold_230 293234..296693 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_230:293234..296693+
coding sequence from alignment at Scaffold_230:293234..296693+

spliced messenger RNA

>EsuBft811_4a-0001 ID=EsuBft811_4a-0001|Name=EsuBft811_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2025bp|location=Sequence derived from alignment at Scaffold_230:293234..296693+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCTCTGCTAACATTGACCCCGCCGGAGCCGCCGCCCTAAGGCCGCC
CTCCGGATCACGGCGCGTTGCGACTTCGCCCGCTCCTGCCTCGCTTTCTG
GGTCCTCCCCGTCGGAGAAGAGGACCCGTCCGCTTGAACCACCCCCGCCT
GTGCCTGGTGCCCGCTCTTTGCCCCTTCGCCCTGCACCGGCTCCGCCGTT
TGATGACAAGTGCGAGTACGCTTCGGATGACGTCCTTCTTTTCTGGAAAC
CTCCGTCTGTGTTCTCGCAATGGACTCCTTCGGCTTTTGACGTACTGGGG
GTACGTTATTCATGTGGTGAGCCACTTATGATGTCTGAAAAAGCGAAGTT
GTTTGGAGATATGACGTCGTATGACAAAATTATGGCTGCAACAGATCCTA
AGACACACAAGTTTTTGGGTCGAAACGTGCGTCCTTTCGACTATGCTGAA
TGGGAGCATCGTCGTGAAGAGATCGTGCTCACGGGGTCGTATGCCAAGTT
TGCTCGAAACCATGATATGAAACATCATCTACTGGAGACGGGTACCCGCC
TCCTTGCAGAAGCCAGCCCCTTCGATCGTGTTTGGGGTATCGGCATGTCT
GCATGCTTTCCAGATGCTAGCGATTCATCCAAGTGGGCGGCTAGCGGTAA
AAACCTGTTGGGAAAAGCTTTGAAGGAAGTTCGACGCCTTTTGCGTGATC
ATCCCCTCTCTGGCGAAGATTTCCCCGCTTCCAATTCTCCCACGCCCCCC
ATTTCGCAGCCTCCTCTCCATGGACATCGACGCATCCATGAGGTTGCTAC
TGCTACAGGTTGTGCCGAGCTCGAGCCGGGAGACGTAATTGGAGTGTCTG
CCGCGCCGCTACTACGAGTACCGGTGGAAACCCTGAAGGCGGCACCATCT
TCGATTCCTACCGGCCCCACAACATCTACATCACCACCTCGGGTCAACGC
CGTTGGCCCCAAGTCCGGGACTCACCGCTCTCCGGACCCAGCCTCTGCCC
CGCCTCCTCCGAAGCCGCCTCCACAAGAACTACTCGACCGCTTCTCTGAG
GCACAGCGCTCCAGCTTCATGCGCGTGTGGGCTAGGCTGCCCGGACGAAG
CCCGTTGCATCACGCCCGTATCGTATCAATATACTACCGGAAATTCCTCA
AGAATCTCGCCACCAAGGTGCGGCCTCTCAACTCACTTCTCAAACAAGGC
GTCCCCTTCAAGTACACCCCGGGCATGGTAAAGGTTGTCAATACGTTGTT
AAGCGAACTCGCTCGCCCCCCGATTTTGGTCTTCCCGGATTGGGCAGCAA
TCGAGGACAACAGCCGTCCTCTTCGTTTGTGTTCCGACGCGTGCATCGAC
GGTTTTGGCTCCTCCTTGGAACAAGGACAGCTCGATGGCTTGGTGAGACC
CAACGTGTACATCAGCCGCGCTACTCTTCCTGCGGAGCGTAACTGGACCG
TTTTGGATCTGGAGGCTGGTGGCATTGTTTGGGCCATCAAATGCCTTCGC
GGTTATCTGTGGTCGACCAAGTTCATCATCTACTCGGACCACAAAGCCTT
GGAGAGCATTGGCAAGGTTGGGGAACACAACGCTAGGGTGCAACGATGGC
TGGAATTCCTGTCCAACTTCACCTACACCCTGAAATATCGGAAAGGTTCG
GCAAACGGCAACGCGGATTTTCTTTCGCGGTTGCCTTTACCAGCACAAGA
CACGGACAAAACCGGCCCCGACTGCATTGATGGTGTCGATCAAGCGGGTG
TTTTCCTCATTTGGGCTTGCGGGCGCAACTATCACTCGTCGTCTACGCCG
GAGGTCCCGCTCGACAAACAACCGGACCGCCGGTCTGCTGCCGCCATCCG
CAACGCCGGCACCGGCGTTTTCGTCGACTGCTCTTGCGCCACCGGTGTCT
TCGCCATCAGCGGCGCGCCCTGCATCCCCGACTTCGCCTTCTCTACAGGT
TTCGCGCGGGACTTCGCCACTCACGATGTCCCCTTCGCGGACATCACCAC
AGACTGCGGCTGCCCCAGTCGCTGA

protein sequence of EsuBft811_4a-0001

>EsuBft811_4 ID=EsuBft811_4|Name=EsuBft811_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=674bp
MASANIDPAGAAALRPPSGSRRVATSPAPASLSGSSPSEKRTRPLEPPPP
VPGARSLPLRPAPAPPFDDKCEYASDDVLLFWKPPSVFSQWTPSAFDVLG
VRYSCGEPLMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAE
WEHRREEIVLTGSYAKFARNHDMKHHLLETGTRLLAEASPFDRVWGIGMS
ACFPDASDSSKWAASGKNLLGKALKEVRRLLRDHPLSGEDFPASNSPTPP
ISQPPLHGHRRIHEVATATGCAELEPGDVIGVSAAPLLRVPVETLKAAPS
SIPTGPTTSTSPPRVNAVGPKSGTHRSPDPASAPPPPKPPPQELLDRFSE
AQRSSFMRVWARLPGRSPLHHARIVSIYYRKFLKNLATKVRPLNSLLKQG
VPFKYTPGMVKVVNTLLSELARPPILVFPDWAAIEDNSRPLRLCSDACID
GFGSSLEQGQLDGLVRPNVYISRATLPAERNWTVLDLEAGGIVWAIKCLR
GYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGS
ANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTP
EVPLDKQPDRRSAAAIRNAGTGVFVDCSCATGVFAISGAPCIPDFAFSTG
FARDFATHDVPFADITTDCGCPSR

mRNA from alignment at Scaffold_230:293234..296693+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft811_4a-0001 ID=EsuBft811_4a-0001|Name=EsuBft811_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3460bp|location=Sequence derived from alignment at Scaffold_230:293234..296693+ (Ectocarpus subulatus male Bft15b)
ATGGCCTCTGCTAACATTGACCCCGCCGGAGCCGCCGCCCTAAGGCCGCC
CTCCGGATCACGGCGCGTTGCGACTTCGCCCGCTCCTGCCTCGCTTTCTG
GGTCCTCCCCGTCGGAGAAGAGGACCCGTCCGCTTGAACCACCCCCGCCT
GTGCCTGGTGCCCGCTCTTTGCCCCTTCGCCCTGCACCGGCTCCGCCGTT
TGATGACAAGTGCGAGTACGCTTCGGATGACGTCCTTCTTTTCTGGAAAC
CTCCGTCTGTGTTCTCGCAATGGACTCCTTCGGCTTTTGACGTACTGGGG
GTACGTTATTCATGTGGTGAGCCACTTATGATGTCTGAAAAAGCGAAGTT
GTTTGGAGATATGACGTCGTATGACAAAATTATGGCTGCAACAGATCCTA
AGACACACAAGTTTTTGGGTCGAAACGTGCGTCCTTTCGACTATGCTGAA
TGGGAGCATCGTCGTGAAGAGATCGTGCTCACGGGGTCGTATGCCAAGTT
TGCTCGAAACCATGATATGAAACATCATCTACTGGAGACGGGTACCCGCC
TCCTTGCAGAAGCCAGCCCCTTCGATCGTGTTTGGGGTATCGGCATGTCT
GCATGCTTTCCAGATGCTAGCGATTCATCCAAGTGGGCGGCTAGCGGTAA
AAACCTGTTGGGAAAAGCTTTGAAGGAAGTTCGACGCCTTTTGCGTGATC
ATCCCCTCTCTGGCGAAGATTTCCCCGCTTCCAATTCTCCCACGCCCCCC
ATTTCGCAGCCTCCTCTCCATGGACATCGACGCATCCATGAGGTTGCTAC
TGCTACAGGTTCTTCGCTACGGAAGGACCCGGGCGAAGACCCAGCTTGTC
TACGTTTGGACGCTCCGGGGGACCATGCTCCTGGCGTTCATCTGGTGGTA
TCGACATCCGCTTGTGCAGACCAGCCTGCTCTTCTCGAACACGGGCCCGA
TCTGGTCGGCGGCACGCTCCTGTTGGACTCGCACTCATACACCACCCGGG
TCCTGCTGCATGGACGACCTACAGCCACTTCTCAACTCGCGCGAGTGGTG
CTTCTGGACTCTGGGTCTCCTGCATCCTTCGTTTCCGACTCCGTGGTCAC
CGCCATGATAGCTGCCGGAGCCCTGACAGCTGGCAGCGTTCGTGTTTCGC
CCTCTCGTCGTTGGGGTGGGTTTGCTGATGGANAATTCGTCTCACCGTAA
TTTTCTCCATGGAGATAGACCTACCGCTTCCCTGGCGGTCTGGGTCTGTG
TGGTTCCAGACGCCGCCATGGGGCACGCCGTGCTTCTGGGTCGTGATAGC
TGGATGCTCTTCAACTCTCGCGTGTTCACCACCCTCCCCCACCCTGGACC
GGACGGCCGGGTTATGGGCGAGCTCACGCTCTCTCCGCATTTTACACCTG
GCGCTTGCGTTTACGCTACACACGACGACGCTCCTGCCTCCTCGTTTCAC
CTTAAATATGCAGGGAGCTTGGGAATTTCTTTGGGGCCGGAGCCCGCACT
CGTTGAGGTGTACATCGTTCGTTCTTCTGGCATGCCTGCGCTGATTGGAG
AGTATCTGGTATCGTTAAAACACGAAGTGGGTGCGCTTTCGTCCCCAGAT
GCGTTCGGTTCCAATGGTCTCCAGCGTATTCCCCTTGCAGGTTGTGCCGA
GCTCGAGCCGGGAGACGTAATTGGAGTGTCTGCCGCGCCGCTACTACGAG
TACCGGTGGAAACCCTGAAGGCGGCACCATCTTCGATTCCTACCGGCCCC
ACAACATCTACATCACCACCTCGGGTCAACGCCGTTGGCCCCAAGTCCGG
GACTCACCGCTCTCCGGACCCAGCCTCTGCCCCGCCTCCTCCGAAGCCGC
CTCCACAAGAACTACTCGACCGCTTCTCTGAGGCACAGCGCTCCAGCTTC
ATGCGCGTGTGGGCTAGGCTGCCCGTACATATGCACGACATCGCTTTCGT
TCTACACAATCCGGGATGGACACCGGAGGCTATTGATCGTTTGGCCGACG
CCCTTGTGGAGTATTCTGACGTGTTCTCTACTTCGAAAACCGATTTTGGT
TCCTGCATCATCATGCCGTTCACTCTTGGTGTCCCAGCAGGGACGAAGCC
CGTTGCATCACGCCCGTATCGTATCAATATACTACCGGAAATTCCTCAAG
AATCTCGCCACCAAGGTGCGGCCTCTCAACTCACTTCTCAAACAAGGCGT
CCCCTTCAAGTACACCCCGGGCATGGTAAAGGTTGTCAATACGTTGTTAA
GCGAACTCGCTCGCCCCCCGATTTTGGTCTTCCCGGATTGGGCAGCAATC
GAGGACAACAGCCGTCCTCTTCGTTTGTGTTCCGACGCGTGCATCGACGG
TTTTGGCTCCTCCTTGGAACAAGGACAGCTCGATGGCTTGGTGAGACCCA
ACGTGTACATCAGCCGCGCTACTCTTCCTGCGGAGCGTAACTGGACCGTT
TTGGATCTGGAGGCTGGTGGCATTGTTTGGGCCATCAAATGCCTTCGCGG
TTATCTGTGGTCGACCAAGTTCATCATCTACTCGGACCACAAAGCCTTGG
AGAGCATTGGCAAGGTTGGGGAACACAACGCTAGGGTGCAACGATGGCTG
GAATTCCTGTCCAACTTCACCTACACCCTGAAATATCGGAAAGGTTCGGC
AAACGGCAACGCGGATTTTCTTTCGCGGTTGCCTTTACCAGCACAAGACA
CGGACAAAACCGGCCCCGACTGCATTGATGGTGTCGATCAAGCGGGTGTT
TTCCTCATTTGGGCTTGCGGGCGCAACTATCACTCGTCGTCTACGCCGGA
GGTCGGTTTGGGTGGGCTCCGTCCTCCTTGCACGGCGGGAGTCGTTTCGC
CCCCAGCGTTGCAGCCCTCCGATTTTGGGGATTTTTGCCGACATCACCCG
CGTCGGTTGGATGCTCTGACGGACTCAACGATTGCCCGCGAGAATTCTCG
GCGGTCCCCGGGGGTCTTCATCGTCTCGCCTGTTCTCGCATCTTCAGGGC
CTGCTTCCTCATTGACTTCGGATGCCTCCCGCGTGATGTCTCTTGCCGCG
TCTTTGGCGACTAGATATGTGCACGTTTTGTGTCCGCTTCCGGAGCAGGG
ACCGCTCATTTGTTCACGGACTCGGGCCAAAACTACCGCAGTTTCCGGAG
GCACCGTCACCGGTCCCGCTTATTTCGGACGCCAGCCGCGGGCTACCATT
GTCCCTCGGACATCGTCGCCTGCCCGTCGCTCTAGCAGGTCCCGCTCGAC
AAACAACCGGACCGCCGGTCTGCTGCCGCCATCCGCAACGCCGGCACCGG
CGTTTTCGTCGACTGCTCTTGCGCCACCGGTGTCTTCGCCATCAGCGGCG
CGCCCTGCATCCCCGACTTCGCCTTCTCTACAGGTTTCGCGCGGGACTTC
GCCACTCACGATGTCCCCTTCGCGGACATCACCACAGACTGCGGCTGCCC
CAGTCGCTGA

Coding sequence (CDS) from alignment at Scaffold_230:293234..296693+

>EsuBft811_4a-0001 ID=EsuBft811_4a-0001|Name=EsuBft811_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2025bp|location=Sequence derived from alignment at Scaffold_230:293234..296693+ (Ectocarpus subulatus male Bft15b)
ATGGCCTCTGCTAACATTGACCCCGCCGGAGCCGCCGCCCTAAGGCCGCC
CTCCGGATCACGGCGCGTTGCGACTTCGCCCGCTCCTGCCTCGCTTTCTG
GGTCCTCCCCGTCGGAGAAGAGGACCCGTCCGCTTGAACCACCCCCGCCT
GTGCCTGGTGCCCGCTCTTTGCCCCTTCGCCCTGCACCGGCTCCGCCGTT
TGATGACAAGTGCGAGTACGCTTCGGATGACGTCCTTCTTTTCTGGAAAC
CTCCGTCTGTGTTCTCGCAATGGACTCCTTCGGCTTTTGACGTACTGGGG
GTACGTTATTCATGTGGTGAGCCACTTATGATGTCTGAAAAAGCGAAGTT
GTTTGGAGATATGACGTCGTATGACAAAATTATGGCTGCAACAGATCCTA
AGACACACAAGTTTTTGGGTCGAAACGTGCGTCCTTTCGACTATGCTGAA
TGGGAGCATCGTCGTGAAGAGATCGTGCTCACGGGGTCGTATGCCAAGTT
TGCTCGAAACCATGATATGAAACATCATCTACTGGAGACGGGTACCCGCC
TCCTTGCAGAAGCCAGCCCCTTCGATCGTGTTTGGGGTATCGGCATGTCT
GCATGCTTTCCAGATGCTAGCGATTCATCCAAGTGGGCGGCTAGCGGTAA
AAACCTGTTGGGAAAAGCTTTGAAGGAAGTTCGACGCCTTTTGCGTGATC
ATCCCCTCTCTGGCGAAGATTTCCCCGCTTCCAATTCTCCCACGCCCCCC
ATTTCGCAGCCTCCTCTCCATGGACATCGACGCATCCATGAGGTTGCTAC
TGCTACAGGTTGTGCCGAGCTCGAGCCGGGAGACGTAATTGGAGTGTCTG
CCGCGCCGCTACTACGAGTACCGGTGGAAACCCTGAAGGCGGCACCATCT
TCGATTCCTACCGGCCCCACAACATCTACATCACCACCTCGGGTCAACGC
CGTTGGCCCCAAGTCCGGGACTCACCGCTCTCCGGACCCAGCCTCTGCCC
CGCCTCCTCCGAAGCCGCCTCCACAAGAACTACTCGACCGCTTCTCTGAG
GCACAGCGCTCCAGCTTCATGCGCGTGTGGGCTAGGCTGCCCGGACGAAG
CCCGTTGCATCACGCCCGTATCGTATCAATATACTACCGGAAATTCCTCA
AGAATCTCGCCACCAAGGTGCGGCCTCTCAACTCACTTCTCAAACAAGGC
GTCCCCTTCAAGTACACCCCGGGCATGGTAAAGGTTGTCAATACGTTGTT
AAGCGAACTCGCTCGCCCCCCGATTTTGGTCTTCCCGGATTGGGCAGCAA
TCGAGGACAACAGCCGTCCTCTTCGTTTGTGTTCCGACGCGTGCATCGAC
GGTTTTGGCTCCTCCTTGGAACAAGGACAGCTCGATGGCTTGGTGAGACC
CAACGTGTACATCAGCCGCGCTACTCTTCCTGCGGAGCGTAACTGGACCG
TTTTGGATCTGGAGGCTGGTGGCATTGTTTGGGCCATCAAATGCCTTCGC
GGTTATCTGTGGTCGACCAAGTTCATCATCTACTCGGACCACAAAGCCTT
GGAGAGCATTGGCAAGGTTGGGGAACACAACGCTAGGGTGCAACGATGGC
TGGAATTCCTGTCCAACTTCACCTACACCCTGAAATATCGGAAAGGTTCG
GCAAACGGCAACGCGGATTTTCTTTCGCGGTTGCCTTTACCAGCACAAGA
CACGGACAAAACCGGCCCCGACTGCATTGATGGTGTCGATCAAGCGGGTG
TTTTCCTCATTTGGGCTTGCGGGCGCAACTATCACTCGTCGTCTACGCCG
GAGGTCCCGCTCGACAAACAACCGGACCGCCGGTCTGCTGCCGCCATCCG
CAACGCCGGCACCGGCGTTTTCGTCGACTGCTCTTGCGCCACCGGTGTCT
TCGCCATCAGCGGCGCGCCCTGCATCCCCGACTTCGCCTTCTCTACAGGT
TTCGCGCGGGACTTCGCCACTCACGATGTCCCCTTCGCGGACATCACCAC
AGACTGCGGCTGCCCCAGTCGCTGA