Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FT62 |
| ProteomeId | EsuBft559_4 |
| Protein domains | IPR006689 |
| Protein domains | IPR027417 |
| Protein domains | IPR006687 |
| Protein domains | Coil |
| Protein domains | IPR024156 |
| Protein domains | PTHR11711 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | adp-ribosylation factor-like protein 13b os:chlamydomonas reinhardtii gn:arl13 pe:1 sv:1 [Automatic annotation] |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 2031 |
| Hectar predicted targeting category | other localisation |
| Evalue | 0.0 |
| EggNOG OGs | COG1100@1|root,KOG0072@2759|Eukaryota |
| Ec32 ortholog description | ARL13, ARF-like Ras superfamily GTPase |
| Ec32 ortholog | Ec-19_003450.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Description | GTP binding |
| COG category | K |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0031227 |
| GO | 0048193 |
| GO | 0042384 |
| GO | 0010256 |
| GO | 0032386 |
| GO | 1901135 |
| GO | 0003333 |
| GO | 0006886 |
| GO | 0005525 |
| GO | 0007264 |
| GO | 0007275 |
| GO | 0034067 |
| GO | 0044431 |
| GO | 0005929 |
| GO | 0016197 |
| GO | 0044710 |
| GO | 0044237 |
| GO | 0044238 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft559_4a-0001 ID=EsuBft559_4a-0001|Name=EsuBft559_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2031bp|location=Sequence derived from alignment at Scaffold_230:185854..190142- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTGGAGATGAGTGGTAGCGGCCTTGCGGGAGTAAGGCGCCTTCACAA
CGAGCGTGAGAAAAGGCGGCGACCACGGACGGCAACGACAACACGCCCCC
GAGCTGTCGATGCTGCAGGTGGATGTTCCCACGACAATGCCCGTTCGACC
TTCGTCGAAGAACCCCCCCGCGCGCGCGCTCCAAGGGTATCCCCGAGGCA
GCGCCGACGTATAGAAGACACTCACGCCTACCTCTGTTCGAAGGTAGACC
CGGTTATGGGCTCCCTCATCCTGGTGCTGATGGAGAGCAGACCCGAGGAA
ATTCGCAAGGCGGCGTTGGATCACCTCCTGTTCAAGAAGCGAATGAGAGA
AGCAAGCGCAGATGATACCGGTGTAGGCAGAGCTGCGGGAGGAAACGCCA
CGGCGGCAGACCCTCAACAATATATTAGTGGCATCGAAGTCGAGGAGGAG
GAGGCTGCACAGCGACGGCGACTCGCTCGGCATCAGGACCGCGTGTTCAT
GGCTCGAGAGGTTGGGCCGCTTGTTACCGAGCTCATCCGCCGGACGCTGC
GTTCGATGCCGGCCGACGTGGAGCTCTTCCTCATCGAACAACTCAAGGGG
GTTCCTTCGGGCGGCGCATGCGATCAGGACATGAACGACAACAACGATCG
CCTTGCTTTTCCTCCACCCAATGGGGCTGAACCCATCAGCAGGAGTAGCA
AACAACACCAAATCGGCCACAGATCGGGCCAACCGCACTGGCCAGGGAGG
CCGTCCACGGCAAGAAGCCGTCTGCAGCAGGCCCAGAGCTTGGACCTCCA
AGTTCAGCAGACATCCCCGCCGTTGTCGGGGAGGACCGAGGCGCGAAGGT
CGCCGAGCCATCCTCGAGGACCGCAGAGCGGGGGCTTTCCCGACGAGGAC
GACCTCGGTGCAGACGGTGTTGGCGGAGAATCCTCGCGACCGGGAGGTGG
CGGTAGGGCCGTCGTGGACGGGGTGAAGGAGAGCCTGAACAAGCCATGGG
ACGTCGAGAGTCTGGAATCTATAACCCACGACCATTGGCGATGGCTACAT
CGGCGATGCATTCTACCCGACCCAGCAATTACCGCACCCACGGTGCAAGG
GTCCAACTACATCCAACTTACGGTGCCCACGACACCCCCCTCCTCCACCT
CTTCTATTGTGCATGGCCTCCAGATATCGTCGAAGTTGAATACCATGCCA
TTTGAAGACCAGCCCCGGGCACCCAGCAAACCGAAGCAGAAGCTTGCTGT
CATCTTGTTGCTCGGGCTGGACGGAGCAGGGAAGACCACGCTGCTAGGAA
CACTGCAGGGCGAGCAAAATCCACGGGTTCGTCCCAGTGTCGGATTCAAG
CCGGTGACAATGATGCTCAGCGACGAGCTCAAGGTAAAGTTCTACGATCT
GGGCGGGGGCAAGAACATCCGGAGCATCTGGAACAAGTACTACCACGACG
CGCACGGCCTGCTCTACGTCGTAGACGGGGCGGACGGGGATCGTTGGGGA
CAGAGCAAGGACATTTTCTTCGCCGCCACGAGCCACAAGTACCTCCAAGG
AAAGCCTTTGGCTCTCATCCTGAACAAGGAGGACGCTGGGCTGCAGATCA
GGGAGGAGAAGGCCGCCGCTGACCTCGGATTGAGCAATAGAAGAGACGCG
AAGGTGTGCCACTGCTCGGTGAACGCGTCGAAGGCCGCGGGAGGAGTGCC
TGACGAGCGGTTGGAAGGGGCGGTGGAATGGCTTCTGGAGACTATCAATG
AGAGTTTCCCTGCGCTAAACGAGCGCGTTCAGCACGACCTCCAGGACATG
GAGAGAGAGTTCCAGCTGGAGAAGGAGAGGAAACAGCTTCAAGTGATGCG
GGGCTTGCTGCGCAAGGCTTTCCCGCAGGTGGAGGGGGGCGAGAGAGAAG
ATTGTTTTGACGAGAGCGAAGGATTGGAGTTTCTGACGAGCGAGGTGGGG
TTGGAGCCGGGAACGCTGGACGCGGAAGGAGCGGAAATCGCCTCCCTTGT
GGGTTACCAGAAGGTTCGTGTGTTCGTGTGA back to topprotein sequence of EsuBft559_4a-0001 >EsuBft559_4 ID=EsuBft559_4|Name=EsuBft559_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=676bp
MVEMSGSGLAGVRRLHNEREKRRRPRTATTTRPRAVDAAGGCSHDNARST
FVEEPPRARAPRVSPRQRRRIEDTHAYLCSKVDPVMGSLILVLMESRPEE
IRKAALDHLLFKKRMREASADDTGVGRAAGGNATAADPQQYISGIEVEEE
EAAQRRRLARHQDRVFMAREVGPLVTELIRRTLRSMPADVELFLIEQLKG
VPSGGACDQDMNDNNDRLAFPPPNGAEPISRSSKQHQIGHRSGQPHWPGR
PSTARSRLQQAQSLDLQVQQTSPPLSGRTEARRSPSHPRGPQSGGFPDED
DLGADGVGGESSRPGGGGRAVVDGVKESLNKPWDVESLESITHDHWRWLH
RRCILPDPAITAPTVQGSNYIQLTVPTTPPSSTSSIVHGLQISSKLNTMP
FEDQPRAPSKPKQKLAVILLLGLDGAGKTTLLGTLQGEQNPRVRPSVGFK
PVTMMLSDELKVKFYDLGGGKNIRSIWNKYYHDAHGLLYVVDGADGDRWG
QSKDIFFAATSHKYLQGKPLALILNKEDAGLQIREEKAAADLGLSNRRDA
KVCHCSVNASKAAGGVPDERLEGAVEWLLETINESFPALNERVQHDLQDM
EREFQLEKERKQLQVMRGLLRKAFPQVEGGEREDCFDESEGLEFLTSEVG
LEPGTLDAEGAEIASLVGYQKVRVFV back to topmRNA from alignment at Scaffold_230:185854..190142- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft559_4a-0001 ID=EsuBft559_4a-0001|Name=EsuBft559_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4289bp|location=Sequence derived from alignment at Scaffold_230:185854..190142- (Ectocarpus subulatus male Bft15b)
ATGGTGGAGATGAGTGGTAGCGGCCTTGCGGGAGTAAGGCGCCTTCACAA
CGAGCGTGAGAAAAGGCGGCGACCACGGACGGCAACGACAACACGCCCCC
GAGCTGTCGATGCTGCAGGTGGATGTTCCCACGACAATGCCCGTTCGACC
TTCGTCGAAGAACCCCCCCGCGCGCGCGCTCCAAGGGTATCCCCGAGGCA
GCGCCGACGTATAGAAGACACTCACGCCTACCTCTGTTCGAAGGTAGACC
CGGTTATGGGCTCCCTCATCCTGGTGCTGATGGAGAGCAGACCCGAGGAA
ATTCGCAAGGCGGCGTTGGATCACCTCCTGTTCAAGAAGCGAATGAGAGA
AGCAAGCGCAGATGATACCGGTGTAGGCAGAGCTGCGGGAGGAAACGCCA
CGGCGGCAGACCCTCAACAATATATTAGTGGCATCGAAGTCGAGGAGGAG
GAGGCTGCACAGCGACGGCGACTCGCTCGGCATCAGGACCGCGTGTTCAT
GGCTCGAGAGGTTGGGCCGCTTGTTACCGAGCTCATCCGCCGGACGCTGC
GTTCGATGCCGGCCGACGTGGAGCTCTTCCTCATCGAACAACTCAAGGGG
GTTCCTTCGGGCGGCGCATGCGATCAGGACATGAACGACAACAACGATCG
CCTTGCTTTTCCTCCACCCAATGGGGCTGAACCCATCAGCAGGAGTAGCA
AACAACACCAAATCGGCCACAGATCGGGCCAACCGCACTGGCCAGGGAGG
CCGTCCACGGCAAGAAGCCGTCTGCAGCAGGCCCAGAGCTTGGACCTCCA
AGTTCAGCAGACATCCCCGCCGTTGTCGGGGAGGACCGAGGCGCGAAGGT
CGCCGAGCCATCCTCGAGGACCGCAGAGCGGGGGCTTTCCCGACGAGGAC
GACCTCGGTGCAGACGGTGTTGGCGGAGAATCCTCGCGACCGGGAGGTGG
CGGTAGGGCCGTCGTGGACGGGGTGAAGGAGAGCCTGAACAAGCCATGGG
ACGTCGAGGTTTGTGAACACCGTAAAAGTACAAGTGCCAGCTGGGTTCTT
GAAACATGGCAGAGTCTGGAATCTATAACCCACGACCATTGGCGATGGCT
ACATCGGCGATGCATTCTACCCGACCCAGCAATTACCGCACCCACGGTGC
AAGGGTCCAACTACATCCAACTTACGGTGCCCACGACACCCCCCTCCTCC
ACCTCTTCTATTGTGCATGGCCTCCAGATATCGTCGAAGTTGAATACCAT
GCCATTTGAAGACCAGCCCCGGGCACCCAGCAAACCGAAGCAGAAGCTTG
CTGTCATCTTGTTGCTCGGGCTGGACGGAGCAGGGAAGACCACGCTGCTA
GGAACACTGCAGGGCGAGCAAAATCCACGGGTTCGTCCCAGTGTCGGATT
CAAGCCGGTGACAATGATGCTCAGCGACGAGCTCAAGGTATGCTCAATTG
TTGAAGGGAGGGCGTCTTGCGCGTAAGCGGTTATCACCACCCCACCAAAC
AGTCCGGAAGATAGCATCCGTATCCCGTCAGAGTAATACCATCGCAAGCT
GCAGCACCACTCCTATTTCGCAGGCCGGAGGGCAGCGGTGGGGTCGCAGA
GTGCTTCGATTGAGTGTCGCAAAACACCCCCTCCTTCAGCGGTCCGTCAG
CAAGGCGACCTTGAATGGCCCGTCATCGTCAACCTCTTACGCAGGGAAGC
GGATGAAAGCGAACAATGGTTCTCCCGTACACACGCGAATCGGTTTCGAG
AGTGAACAAAATAGCAGCCCTGAGCAATTCTGCAACACACCCGCCGGTGC
CGCCGTCGCCTCTACACCGAAGCAAGCCTAAACACAATCGAGTCCGATTG
AAAAAGATCAACGTATACCTTCCTTGCGATCGCCGCCGCAGGTAAAGTTC
TACGATCTGGGCGGGGGCAAGAACATCCGGAGCATCTGGAACAAGTACTA
CCACGACGCGCACGGCCTGCTCTACGTCGTAGACGGGGCGGACGGGGATC
GTTGGGGACAGAGCAAGGACATTTTCTTCGCCGCCACGAGCCACAAGTAC
CTCCAAGGAAAGGTGATCCGAGGTGCCTTCTCCCCTCCCCTCTGTCGGCT
CGCTGCAATCGGTTTGGGAAAGATGGTGTGTTCTCTCGAGGACGCGCGGT
CAATGGTCCAACCGCTAAGGCAAGCAAAACATGAGTTCGCTCCCCCGCTT
TCTCCCCTTCCTCCTCCTGCTGATGTTTGTGCTCCGTGCCCTTTTTCTTG
CGTGCCTAGCCTTTGGCTCTCATCCTGAACAAGGAGGACGCTGGGCTGCA
GATCAGGGAGGAGAAGGCCGCCGCTGACCTCGGATTGAGCAATAGAAGAG
ACGCGAAGGTGTGTAGGCTATATGTCTTCTGTACTACTGTAAGAGCTGTC
ATATTTACCGTGCTTAACCTTGCAACACGAGCAAGTAATAGCAACACCGG
CAAGTGAAGGGATGAGGCCACAGTGCTAGCCCATACTCCCCGAAGTCGCC
CTCTTCTAGACTACTCTGCAGGTGGGACCAACTTTTTGTGTCCAATGCTT
CTATTTGGTTTGATTTTCGCTCGATCTCTTATGTTTCGTGTATCTCAGCC
ATTTTCCATGGAATGGGCGAGGTTGCGACACCGAGAACCGTTGCTCAACT
GTTTGGGCTTCACCAGCAACAGTAGTAGCATGAATGGGGTGGGTGGACGC
GGGGCTGAACAGTTTCAATGTTTAGACAGCAACAGCAACAAGACCCAGGG
GAGACGCGACGGTGCGAAGTAAGGAAGCACATCCAACATGATATATATAC
TTGTGTGCGAATGTGGATGCAACAAATCACAACAAGTTTTTTCTCCTCGG
CGCGAGCCCGTCGACTTGCCGACACCCTGCTCAACATACGTCTTGCGACA
AGCTCCCCCCAGTTCGGATCATCCTAACACAACACGCGCACAAGGTTCCA
TCTCTTGCCGGTTCTCACACCGGAGGCTTTTCGTTCGTTGTTTCGTCTTG
GAGCAGAGTAAAACGAACCTTACGTATCAGTCCCCGTAACCCGCTGTGTT
TCTTAGGTGTGCCACTGCTCGGTGAACGCGTCGAAGGCCGCGGGAGGAGT
GCCTGACGAGCGGTTGGAAGGGGCGGTGGAATGGCTTCTGGAGACTATCA
ATGTATGAAGCCGAAAAAGTCACCTTTTCGGTGGTTGCGGTGTTGTTGGG
CGCACGATCTAGGCAACACCCGGGGTGGTTGTTCGTTCTTGGGTGTGAAG
GAGAGTCTATTACATTGCGCATTTCTCGTTCTCGCCCTCCCTGGGAAGAA
CATCTTTGATGTGCGCTGGCGTGAGCGATTTCAAGCGCAAGAGCACGATC
GCCACGTACGAGCGGCATGCAAGATCCCAAGTCCGCCATTCATGGTCTCA
TTCTCCCCCGTGAAGTTTGCCTGGAAACGTCTGCCGATTCAAATCGGTAG
GTCTAGAATCTCGGTCGTACTACAATATGTCATTGAAGTATTTACTGTAG
CTGGGCTCTCCATCTTTGTGACCGCCCACCCTTCCGTCCTACGCGCTTGA
TGCATGCCGCGGACCATTCCCGTCGATCTCACGAAACGTAAACCGGCACC
TGTGTGCCTAAACCGCCATAATTTGTTGTTGGAAGTGGGGCAAGCTCCCT
TTTCTGGTGTCCGACGATCTGGTCCTCGCTCTTTTTTCTGGTTGCAGCGT
TGTAGGCGGTGGTCGCCTTTGCAGTCGTCGCCGTCGTCGCCGCCGGCGGG
TACCATTGACGCCGACCTTCTTGTTGTTGTTCGCTTCGCGCAGGAGAGTT
TCCCTGCGCTAAACGAGCGCGTTCAGCACGACCTCCAGGACATGGAGAGA
GAGTTCCAGCTGGAGAAGGAGAGGAAACAGCTTCAAGTGATGCGGGGCTT
GCTGCGCAAGGCTTTCCCGCAGGTGGAGGTGAGACGCCGACGGCATCCGT
TTTGTAGGCTCCTGCGGGGGGTCAACCCGAAATCCTCCGGTGCCGAGTGG
TCCGAAACCACAACGGCACCATGGAAAAGAGGAGTACAGGGATGATGGGC
CCGGGTATGATTTGCTTAATTATACGACGTGTTGTGCGTCGGCGCTCCAC
CACACACAAACTTCTTTCCTTGTTCTTTGCTTGCAAACCTAGGGGGGCGA
GAGAGAAGATTGTTTTGACGAGAGCGAAGGATTGGAGTTTCTGACGAGCG
AGGTGGGGTTGGAGCCGGGAACGCTGGACGCGGAAGGAGCGGAAATCGCC
TCCCTTGTGGGTTACCAGAAGGTTCGTGTGTTCGTGTGA back to topCoding sequence (CDS) from alignment at Scaffold_230:185854..190142- >EsuBft559_4a-0001 ID=EsuBft559_4a-0001|Name=EsuBft559_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2031bp|location=Sequence derived from alignment at Scaffold_230:185854..190142- (Ectocarpus subulatus male Bft15b)
ATGGTGGAGATGAGTGGTAGCGGCCTTGCGGGAGTAAGGCGCCTTCACAA
CGAGCGTGAGAAAAGGCGGCGACCACGGACGGCAACGACAACACGCCCCC
GAGCTGTCGATGCTGCAGGTGGATGTTCCCACGACAATGCCCGTTCGACC
TTCGTCGAAGAACCCCCCCGCGCGCGCGCTCCAAGGGTATCCCCGAGGCA
GCGCCGACGTATAGAAGACACTCACGCCTACCTCTGTTCGAAGGTAGACC
CGGTTATGGGCTCCCTCATCCTGGTGCTGATGGAGAGCAGACCCGAGGAA
ATTCGCAAGGCGGCGTTGGATCACCTCCTGTTCAAGAAGCGAATGAGAGA
AGCAAGCGCAGATGATACCGGTGTAGGCAGAGCTGCGGGAGGAAACGCCA
CGGCGGCAGACCCTCAACAATATATTAGTGGCATCGAAGTCGAGGAGGAG
GAGGCTGCACAGCGACGGCGACTCGCTCGGCATCAGGACCGCGTGTTCAT
GGCTCGAGAGGTTGGGCCGCTTGTTACCGAGCTCATCCGCCGGACGCTGC
GTTCGATGCCGGCCGACGTGGAGCTCTTCCTCATCGAACAACTCAAGGGG
GTTCCTTCGGGCGGCGCATGCGATCAGGACATGAACGACAACAACGATCG
CCTTGCTTTTCCTCCACCCAATGGGGCTGAACCCATCAGCAGGAGTAGCA
AACAACACCAAATCGGCCACAGATCGGGCCAACCGCACTGGCCAGGGAGG
CCGTCCACGGCAAGAAGCCGTCTGCAGCAGGCCCAGAGCTTGGACCTCCA
AGTTCAGCAGACATCCCCGCCGTTGTCGGGGAGGACCGAGGCGCGAAGGT
CGCCGAGCCATCCTCGAGGACCGCAGAGCGGGGGCTTTCCCGACGAGGAC
GACCTCGGTGCAGACGGTGTTGGCGGAGAATCCTCGCGACCGGGAGGTGG
CGGTAGGGCCGTCGTGGACGGGGTGAAGGAGAGCCTGAACAAGCCATGGG
ACGTCGAGAGTCTGGAATCTATAACCCACGACCATTGGCGATGGCTACAT
CGGCGATGCATTCTACCCGACCCAGCAATTACCGCACCCACGGTGCAAGG
GTCCAACTACATCCAACTTACGGTGCCCACGACACCCCCCTCCTCCACCT
CTTCTATTGTGCATGGCCTCCAGATATCGTCGAAGTTGAATACCATGCCA
TTTGAAGACCAGCCCCGGGCACCCAGCAAACCGAAGCAGAAGCTTGCTGT
CATCTTGTTGCTCGGGCTGGACGGAGCAGGGAAGACCACGCTGCTAGGAA
CACTGCAGGGCGAGCAAAATCCACGGGTTCGTCCCAGTGTCGGATTCAAG
CCGGTGACAATGATGCTCAGCGACGAGCTCAAGGTAAAGTTCTACGATCT
GGGCGGGGGCAAGAACATCCGGAGCATCTGGAACAAGTACTACCACGACG
CGCACGGCCTGCTCTACGTCGTAGACGGGGCGGACGGGGATCGTTGGGGA
CAGAGCAAGGACATTTTCTTCGCCGCCACGAGCCACAAGTACCTCCAAGG
AAAGCCTTTGGCTCTCATCCTGAACAAGGAGGACGCTGGGCTGCAGATCA
GGGAGGAGAAGGCCGCCGCTGACCTCGGATTGAGCAATAGAAGAGACGCG
AAGGTGTGCCACTGCTCGGTGAACGCGTCGAAGGCCGCGGGAGGAGTGCC
TGACGAGCGGTTGGAAGGGGCGGTGGAATGGCTTCTGGAGACTATCAATG
AGAGTTTCCCTGCGCTAAACGAGCGCGTTCAGCACGACCTCCAGGACATG
GAGAGAGAGTTCCAGCTGGAGAAGGAGAGGAAACAGCTTCAAGTGATGCG
GGGCTTGCTGCGCAAGGCTTTCCCGCAGGTGGAGGGGGGCGAGAGAGAAG
ATTGTTTTGACGAGAGCGAAGGATTGGAGTTTCTGACGAGCGAGGTGGGG
TTGGAGCCGGGAACGCTGGACGCGGAAGGAGCGGAAATCGCCTCCCTTGT
GGGTTACCAGAAGGTTCGTGTGTTCGTGTGA back to top
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