Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft144_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 81 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-00_003940.2 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft144_6a-0001 ID=EsuBft144_6a-0001|Name=EsuBft144_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=815bp|location=Sequence derived from alignment at Scaffold_228:543834..544730+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCGGCGATCCTTGAAGGACATGATGCCGTTCGTCAACTCCTTGCTCGA
TCTGCCCCTTCAGGCCCACAGGTCGAGAAGGTGGGCCTCCCTGGATCCGC
GCGACATCTGGGGGAGGTTCGTCGATATCGCGTGTAACAGATTGGTCATT
CGAGTGCGGCCGGCGTGGCCGCGTTAGCCTGCCACCAGGGACGAGTATTC
CCGGGTTTCCCCGTCCGCCATTTTTTTCCGTTTGGGCCGATTTTTTCCGG
TTGGGCGATTTTTTACCGTCTGGGCCGGGTCCCGACGGAAAAATCCACCG
GGTTATTGAGGATTTTCAGTTTTTTTTGGCCGCAAGAAATACGCCGGCAA
CTTTTTCCGTCGAGGACGGGACGAAGCGGCACGTACGAGCGCAAGCAATC
AAGCGCTCCCTGCGCAGAAGGCTGAGCAGCGGAGACTGGGGTTTCTTTCA
CAGCAACGTGTGTGCAGTTGTTCAGTCGGTATTCGGGCGCGCGAGAAGGT
TTTTGGTGCCCGCGTGCGGCGGAACAGCAGCTCGCGTTTTATTTTGAACC
GGATCATCTTTGATCGAGGTAGGAGGGCCTCTGGAAGAGGAGAGAGGATC
GCGACTCAGCGCGAGGCGGCAGGAGCCCAGGCGGCAAGAGCCCGACCGTC
TGTGAGTAGGTAGGAGGAGAAGGAGGAGGGCGCGTCCCTGAGTGGTTGCA
TGGACAGCAGTGCGACCGGAGAGGAGAGCGACTCCGGCAGCAGCTCCAGC
TTGGTCGTAGATGTGGTTCCTGCCTCGCGTGCACGTGGAGGTGGTACGCA
GGAAGTCAGCTGTGA back to topprotein sequence of EsuBft144_6a-0001 >EsuBft144_6 ID=EsuBft144_6|Name=EsuBft144_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=58bp
MRRSLKDMMPFVNSLLDLPLQAHRSRRWASLDPRDIWGRFVDIACNRLVI
RVRPAWPR back to topmRNA from alignment at Scaffold_228:543834..544730+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft144_6a-0001 ID=EsuBft144_6a-0001|Name=EsuBft144_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=897bp|location=Sequence derived from alignment at Scaffold_228:543834..544730+ (Ectocarpus subulatus male Bft15b)
ATGCGGCGATCCTTGAAGGTACGCACATGCCAATAGGCTAGACTATACAA
ATCAATTCCTCAACTGACCTTTCCTTCCGGCGTTTCTTGTGCGGTCACAG
GACATGATGCCGTTCGTCAACTCCTTGCTCGATCTGCCCCTTCAGGCCCA
CAGGTCGAGAAGGTGGGCCTCCCTGGATCCGCGCGACATCTGGGGGAGGT
TCGTCGATATCGCGTGTAACAGATTGGTCATTCGAGTGCGGCCGGCGTGG
CCGCGTTAGCCTGCCACCAGGGACGAGTATTCCCGGGTTTCCCCGTCCGC
CATTTTTTTCCGTTTGGGCCGATTTTTTCCGGTTGGGCGATTTTTTACCG
TCTGGGCCGGGTCCCGACGGAAAAATCCACCGGGTTATTGAGGATTTTCA
GTTTTTTTTGGCCGCAAGAAATACGCCGGCAACTTTTTCCGTCGAGGACG
GGACGAAGCGGCACGTACGAGCGCAAGCAATCAAGCGCTCCCTGCGCAGA
AGGCTGAGCAGCGGAGACTGGGGTTTCTTTCACAGCAACGTGTGTGCAGT
TGTTCAGTCGGTATTCGGGCGCGCGAGAAGGTTTTTGGTGCCCGCGTGCG
GCGGAACAGCAGCTCGCGTTTTATTTTGAACCGGATCATCTTTGATCGAG
GTAGGAGGGCCTCTGGAAGAGGAGAGAGGATCGCGACTCAGCGCGAGGCG
GCAGGAGCCCAGGCGGCAAGAGCCCGACCGTCTGTGAGTAGGTAGGAGGA
GAAGGAGGAGGGCGCGTCCCTGAGTGGTTGCATGGACAGCAGTGCGACCG
GAGAGGAGAGCGACTCCGGCAGCAGCTCCAGCTTGGTCGTAGATGTGGTT
CCTGCCTCGCGTGCACGTGGAGGTGGTACGCAGGAAGTCAGCTGTGA back to topCoding sequence (CDS) from alignment at Scaffold_228:543834..544730+ >EsuBft144_6a-0001 ID=EsuBft144_6a-0001|Name=EsuBft144_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=177bp|location=Sequence derived from alignment at Scaffold_228:543834..544730+ (Ectocarpus subulatus male Bft15b)
ATGCGGCGATCCTTGAAGGACATGATGCCGTTCGTCAACTCCTTGCTCGA
TCTGCCCCTTCAGGCCCACAGGTCGAGAAGGTGGGCCTCCCTGGATCCGC
GCGACATCTGGGGGAGGTTCGTCGATATCGCGTGTAACAGATTGGTCATT
CGAGTGCGGCCGGCGTGGCCGCGTTAG back to top
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