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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Seed ortholog | 2880.D7G873 |
| ProteomeId | EsuBft144_14 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 96 |
| Hectar predicted targeting category | other localisation |
| Evalue | 4.4e-63 |
| EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
| KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
| KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
| KEGG Module | M00089 |
| EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
| Description | acetylation-dependent protein binding |
| COG category | BK |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft144_14a-0001 ID=EsuBft144_14a-0001|Name=EsuBft144_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=962bp|location=Sequence derived from alignment at Scaffold_228:484317..485278+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGGAGATAAGAAGGTAGTGAAAGAACTCGAGGCGGCGCAGATGAAAGC
AGCGAAAATCATCCTAGGATGCTCCAAGCGCACACGTAATGCAGCCGTCA
GGGCAGAATTGGGGATCCAATCCCAACGGTCGGGAAGAGACGCAAGGAAG
CTGACATGGCAGTATTGCATGTGCGGGATGGGAGAGGAGAGAATGCCGAG
AATAGTATGGGAGACGAAGTGGGCAAACAAAAAGAGGGGTAGACAACCCA
CGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGCTCGACATCGAC
GAAGATGAAACGCTGGAAACGGAGGGTCTAAAGGGGTTCAAGGCGAAGAT
ATCTGTTGCTTGTGCCGAGGGAGGAGAACAGAAACTAAGGAAAGAAACCA
AGGACAAGGAGTGTCTAGGAGTGTACGGAATGTTGAAGGAAGGAATAGGG
TTGAAGGATTACCTACAGGGACCAATGGATGCAGGAACAAAGCTTAAGGT
CGAATTCAGGGCCAGAGACGAAGGCCTTCCAGAACGTCGACGAAGACACA
GGACGGTAGACGACGAAGTCGACGAGTTCAAATGTGATTGCGGCTTCGAA
TGCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCGTGGTACAAGAAGGA
GAGGCAAGTGTACGTGACTGAGCTGGGAAAAATAGATGGGACGCACAGGG
AGATGTTTGAGGCATGGGATACAAAGGAAAGTACGGTAGCTGTACTGGGG
CATAGGAGGTGGGTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGACAG
ACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTAGAAAGGAACGAT
TGGCCATCGGTGATCGGTCCTGTGGGAACAATGCTCCGTCCTATCGAGGA
CGTGCGGTCAATGGTCTAACCGCTAAGGCATGCAGAACATAAGAGTACGC
CCCTCCCCCCCC back to topprotein sequence of EsuBft144_14a-0001 >EsuBft144_14 ID=EsuBft144_14|Name=EsuBft144_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=313bp
MGDKKVVKELEAAQMKAAKIILGCSKRTRNAAVRAELGIQSQRSGRDARK
LTWQYCMCGMGEERMPRIVWETKWANKKRGRQPTEWVKVVEDVWKGLDID
EDETLETEGLKGFKAKISVACAEGGEQKLRKETKDKECLGVYGMLKEGIG
LKDYLQGPMDAGTKLKVEFRARDEGLPERRRRHRTVDDEVDEFKCDCGFE
CEDRVHVVAECPWYKKERQVYVTELGKIDGTHREMFEAWDTKESTVAVLG
HRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSYRG
RAVNGLTAKACRT back to topmRNA from alignment at Scaffold_228:484317..485278+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft144_14a-0001 ID=EsuBft144_14a-0001|Name=EsuBft144_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=962bp|location=Sequence derived from alignment at Scaffold_228:484317..485278+ (Ectocarpus subulatus male Bft15b)
ATGGGAGATAAGAAGGTAGTGAAAGAACTCGAGGCGGCGCAGATGAAAGC
AGCGAAAATCATCCTAGGATGCTCCAAGCGCACACGTAATGCAGCCGTCA
GGGCAGAATTGGGGATCCAATCCCAACGGTCGGGAAGAGACGCAAGGAAG
CTGACATGGCAGTATTGCATGTGCGGGATGGGAGAGGAGAGAATGCCGAG
AATAGTATGGGAGACGAAGTGGGCAAACAAAAAGAGGGGTAGACAACCCA
CGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGCTCGACATCGAC
GAAGATGAAACGCTGGAAACGGAGGGTCTAAAGGGGTTCAAGGCGAAGAT
ATCTGTTGCTTGTGCCGAGGGAGGAGAACAGAAACTAAGGAAAGAAACCA
AGGACAAGGAGTGTCTAGGAGTGTACGGAATGTTGAAGGAAGGAATAGGG
TTGAAGGATTACCTACAGGGACCAATGGATGCAGGAACAAAGCTTAAGGT
CGAATTCAGGGCCAGAGACGAAGGCCTTCCAGAACGTCGACGAAGACACA
GGACGGTAGACGACGAAGTCGACGAGTTCAAATGTGATTGCGGCTTCGAA
TGCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCGTGGTACAAGAAGGA
GAGGCAAGTGTACGTGACTGAGCTGGGAAAAATAGATGGGACGCACAGGG
AGATGTTTGAGGCATGGGATACAAAGGAAAGTACGGTAGCTGTACTGGGG
CATAGGAGGTGGGTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGACAG
ACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTAGAAAGGAACGAT
TGGCCATCGGTGATCGGTCCTGTGGGAACAATGCTCCGTCCTATCGAGGA
CGTGCGGTCAATGGTCTAACCGCTAAGGCATGCAGAACATAAGAGTACGC
CCCTCCCCCCCC back to topCoding sequence (CDS) from alignment at Scaffold_228:484317..485278+ >EsuBft144_14a-0001 ID=EsuBft144_14a-0001|Name=EsuBft144_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=942bp|location=Sequence derived from alignment at Scaffold_228:484317..485278+ (Ectocarpus subulatus male Bft15b)
ATGGGAGATAAGAAGGTAGTGAAAGAACTCGAGGCGGCGCAGATGAAAGC
AGCGAAAATCATCCTAGGATGCTCCAAGCGCACACGTAATGCAGCCGTCA
GGGCAGAATTGGGGATCCAATCCCAACGGTCGGGAAGAGACGCAAGGAAG
CTGACATGGCAGTATTGCATGTGCGGGATGGGAGAGGAGAGAATGCCGAG
AATAGTATGGGAGACGAAGTGGGCAAACAAAAAGAGGGGTAGACAACCCA
CGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGCTCGACATCGAC
GAAGATGAAACGCTGGAAACGGAGGGTCTAAAGGGGTTCAAGGCGAAGAT
ATCTGTTGCTTGTGCCGAGGGAGGAGAACAGAAACTAAGGAAAGAAACCA
AGGACAAGGAGTGTCTAGGAGTGTACGGAATGTTGAAGGAAGGAATAGGG
TTGAAGGATTACCTACAGGGACCAATGGATGCAGGAACAAAGCTTAAGGT
CGAATTCAGGGCCAGAGACGAAGGCCTTCCAGAACGTCGACGAAGACACA
GGACGGTAGACGACGAAGTCGACGAGTTCAAATGTGATTGCGGCTTCGAA
TGCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCGTGGTACAAGAAGGA
GAGGCAAGTGTACGTGACTGAGCTGGGAAAAATAGATGGGACGCACAGGG
AGATGTTTGAGGCATGGGATACAAAGGAAAGTACGGTAGCTGTACTGGGG
CATAGGAGGTGGGTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGACAG
ACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTAGAAAGGAACGAT
TGGCCATCGGTGATCGGTCCTGTGGGAACAATGCTCCGTCCTATCGAGGA
CGTGCGGTCAATGGTCTAACCGCTAAGGCATGCAGAACATAA back to top
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