Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G557 |
| ProteomeId | EsuBft967_11 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2880.D7G557|- |
| Length | 100 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.26e-72 |
| EggNOG OGs | 29ZCP@1|root,2RXW0@2759|Eukaryota |
| Ec32 ortholog description | EsV-1-7 domain protein |
| Ec32 ortholog | Ec-13_003790.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft967_11a-0001 ID=EsuBft967_11a-0001|Name=EsuBft967_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1005bp|location=Sequence derived from alignment at Scaffold_228:262174..263178- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCCGAGTGTAAGGCCCCGCAATGCACCCGACAGCCCTCCTTCAATGC
CGAGGGCAGCAAGACGGCGATGTTTTGCAGGCAACATGCCGAGGAGTCCA
TGGTGGACGTAAGGAACAAGCGCTGCGCTCAAGCCGGATGTACACGGCGA
GCCACGTTCAACAAACAAGGCAACAAGATGCCGATGTTCTGCAGGCAACA
TGCCGAGGAGTCCATGGTGGACGTATGGCACAAGCACTGCGCCCAAGCCG
GATGTACACGGCGAGCCACGTTCAACAAACAAGGCAACAAGATGCCGATG
TTCTGCAGGCAACATGCCGAGGAGTCCATGGTGGACGTATGGCACAAGCA
CTGCGCCCAAGCCGGATGTACACGGCGAGCCACGTTCAACAAACAAGGCA
ACAAGATGCCGATGTTCTGCAGGCAACATGCCGAGGAGTCCATGGTGGAC
GTATGGCACAAGCACTGCGCCCACGGTGAAGGGTGCACAAGTCGACCGAG
TTGGGGGTACTGGGCGGACGTGACGGCTAGTGTATGCGCGAAACACAAAG
GCGACCTCACGGAAGGGTTCGCGATCAACTTCAATCGACAGTGCAAGGTA
GCTGGTGTGAAGGGATGCATTGCAGTTGCGAGGTGGGGGGTGGACGGCGA
GCACCCGACTCACTGCGACAAGCACGGTGCACCGCGGGCCGGCGAAGGCT
TCGTCCGCGTCCCATCAAGCGGTCGGAGGACTTCAGCTTCATCTTCGTAT
TCGAGCGCGGCCTCGGGCAGGAGCCGCTCCGCCCGGGGTGGCCGAACCGG
AACCCGTGGCGGGGGTGGAATCAAGAGGGCCCGCAAGGCGGTACCCCGGC
GCCCTGTCGAGAGCTCGTCAGAGGAGGAGTCGAACGAAGACTTCGACGAC
GACGACAGCGATGGCTCGGTGGGGGGCGCCAATGAGGAGGAAGAAGACGA
GGATGAGGAGCAAGAGAAGGTCGAGAAACCGAAGAGGAAGATCATTTGGC
TTTAG back to topprotein sequence of EsuBft967_11a-0001 >EsuBft967_11 ID=EsuBft967_11|Name=EsuBft967_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=334bp
MSECKAPQCTRQPSFNAEGSKTAMFCRQHAEESMVDVRNKRCAQAGCTRR
ATFNKQGNKMPMFCRQHAEESMVDVWHKHCAQAGCTRRATFNKQGNKMPM
FCRQHAEESMVDVWHKHCAQAGCTRRATFNKQGNKMPMFCRQHAEESMVD
VWHKHCAHGEGCTSRPSWGYWADVTASVCAKHKGDLTEGFAINFNRQCKV
AGVKGCIAVARWGVDGEHPTHCDKHGAPRAGEGFVRVPSSGRRTSASSSY
SSAASGRSRSARGGRTGTRGGGGIKRARKAVPRRPVESSSEEESNEDFDD
DDSDGSVGGANEEEEDEDEEQEKVEKPKRKIIWL back to topmRNA from alignment at Scaffold_228:262174..263178- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft967_11a-0001 ID=EsuBft967_11a-0001|Name=EsuBft967_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1005bp|location=Sequence derived from alignment at Scaffold_228:262174..263178- (Ectocarpus subulatus male Bft15b)
ATGTCCGAGTGTAAGGCCCCGCAATGCACCCGACAGCCCTCCTTCAATGC
CGAGGGCAGCAAGACGGCGATGTTTTGCAGGCAACATGCCGAGGAGTCCA
TGGTGGACGTAAGGAACAAGCGCTGCGCTCAAGCCGGATGTACACGGCGA
GCCACGTTCAACAAACAAGGCAACAAGATGCCGATGTTCTGCAGGCAACA
TGCCGAGGAGTCCATGGTGGACGTATGGCACAAGCACTGCGCCCAAGCCG
GATGTACACGGCGAGCCACGTTCAACAAACAAGGCAACAAGATGCCGATG
TTCTGCAGGCAACATGCCGAGGAGTCCATGGTGGACGTATGGCACAAGCA
CTGCGCCCAAGCCGGATGTACACGGCGAGCCACGTTCAACAAACAAGGCA
ACAAGATGCCGATGTTCTGCAGGCAACATGCCGAGGAGTCCATGGTGGAC
GTATGGCACAAGCACTGCGCCCACGGTGAAGGGTGCACAAGTCGACCGAG
TTGGGGGTACTGGGCGGACGTGACGGCTAGTGTATGCGCGAAACACAAAG
GCGACCTCACGGAAGGGTTCGCGATCAACTTCAATCGACAGTGCAAGGTA
GCTGGTGTGAAGGGATGCATTGCAGTTGCGAGGTGGGGGGTGGACGGCGA
GCACCCGACTCACTGCGACAAGCACGGTGCACCGCGGGCCGGCGAAGGCT
TCGTCCGCGTCCCATCAAGCGGTCGGAGGACTTCAGCTTCATCTTCGTAT
TCGAGCGCGGCCTCGGGCAGGAGCCGCTCCGCCCGGGGTGGCCGAACCGG
AACCCGTGGCGGGGGTGGAATCAAGAGGGCCCGCAAGGCGGTACCCCGGC
GCCCTGTCGAGAGCTCGTCAGAGGAGGAGTCGAACGAAGACTTCGACGAC
GACGACAGCGATGGCTCGGTGGGGGGCGCCAATGAGGAGGAAGAAGACGA
GGATGAGGAGCAAGAGAAGGTCGAGAAACCGAAGAGGAAGATCATTTGGC
TTTAG back to topCoding sequence (CDS) from alignment at Scaffold_228:262174..263178- >EsuBft967_11a-0001 ID=EsuBft967_11a-0001|Name=EsuBft967_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1005bp|location=Sequence derived from alignment at Scaffold_228:262174..263178- (Ectocarpus subulatus male Bft15b)
ATGTCCGAGTGTAAGGCCCCGCAATGCACCCGACAGCCCTCCTTCAATGC
CGAGGGCAGCAAGACGGCGATGTTTTGCAGGCAACATGCCGAGGAGTCCA
TGGTGGACGTAAGGAACAAGCGCTGCGCTCAAGCCGGATGTACACGGCGA
GCCACGTTCAACAAACAAGGCAACAAGATGCCGATGTTCTGCAGGCAACA
TGCCGAGGAGTCCATGGTGGACGTATGGCACAAGCACTGCGCCCAAGCCG
GATGTACACGGCGAGCCACGTTCAACAAACAAGGCAACAAGATGCCGATG
TTCTGCAGGCAACATGCCGAGGAGTCCATGGTGGACGTATGGCACAAGCA
CTGCGCCCAAGCCGGATGTACACGGCGAGCCACGTTCAACAAACAAGGCA
ACAAGATGCCGATGTTCTGCAGGCAACATGCCGAGGAGTCCATGGTGGAC
GTATGGCACAAGCACTGCGCCCACGGTGAAGGGTGCACAAGTCGACCGAG
TTGGGGGTACTGGGCGGACGTGACGGCTAGTGTATGCGCGAAACACAAAG
GCGACCTCACGGAAGGGTTCGCGATCAACTTCAATCGACAGTGCAAGGTA
GCTGGTGTGAAGGGATGCATTGCAGTTGCGAGGTGGGGGGTGGACGGCGA
GCACCCGACTCACTGCGACAAGCACGGTGCACCGCGGGCCGGCGAAGGCT
TCGTCCGCGTCCCATCAAGCGGTCGGAGGACTTCAGCTTCATCTTCGTAT
TCGAGCGCGGCCTCGGGCAGGAGCCGCTCCGCCCGGGGTGGCCGAACCGG
AACCCGTGGCGGGGGTGGAATCAAGAGGGCCCGCAAGGCGGTACCCCGGC
GCCCTGTCGAGAGCTCGTCAGAGGAGGAGTCGAACGAAGACTTCGACGAC
GACGACAGCGATGGCTCGGTGGGGGGCGCCAATGAGGAGGAAGAAGACGA
GGATGAGGAGCAAGAGAAGGTCGAGAAACCGAAGAGGAAGATCATTTGGC
TTTAG back to top
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