EsuBft1515_5a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1515_5a-0001 ID=EsuBft1515_5a-0001|Name=EsuBft1515_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2226bp|location=Sequence derived from alignment at Scaffold_228:178006..185432+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GTCGCGGCAGCGCAGCGTTGGGTGTGCCCTTGCCCACAAGGAAGACAGAG
AGAGCATAAGGCGTGCCCAACGGCTCCGACCTGGCCGCCCCTGTGTTTAA
TTAATCCCCCTCTGTGTTTAAACAGTTGACAGCAGTCCCGTCCCGATGTG
GAACATGGCCAGCCTTGTTCGCCGGGTGCACGCCAAAGGAGGTGTGCTAG
TGAAATTCGAGTGGGCGCCAAGCCTACTGTTGTGGCTTCTCGGGGTCGTT
GGTGTTGGGAGCGTGCTGATGGCATGCATGGGGTCCGTTTCCTCTCCACC
AGGCGCTATTCAAGGCTCGCAACAATCGGAACGCTACCAAGCCTGCGAAG
CCTCTTCGAAGCGCGAGATCCGACACATGTCTCGGAAAAAGGCGGCATTG
CACACCTTGGTTCGTTCGTCTGCCGGTCTTGGTGGCCGCCGTGCTATGCT
GGCCTTAATCTCAGTCGCCCACGTGGACGTGGTGGAAGGCAAATGGCTTA
TTGAATTTCCGTCGGGGTTCAGGTGCATGTGGAACGACCTGCCGCACGGC
CTCCAGTTCGCAATACTCTTGCTGATGCTGGGGATTCTGTACGGAGTCAA
TCGACTCTTCGACAAAGCCGACGAGGCTATATACACTCGCCTGACCTGCG
CCACAGCAGGGCTACTGAATGAGAGGAGGCTCCACCACGCTTACTGAATA
TCCTAGCCGATTCAATAGCGAAATCCGAGAGACGAAACGGAAGCCCTGCA
AAGGGTTTGGGTGTTGCTGCGAGCCTATATTGGCATTGACCATCGCTTTC
ATTAGCGCACCGCGATTGCCCTCCTCGGTTGGCTGAAAGTTGCTGGAGAC
TAGGACGCCATCATATCTATTTTGTGAACGGCCGTTCCCTTGGTCAGCAC
CGGTGGCCCGTTTCTCGCTCGGTGTGGCAGCGAGAATACATGCATGGGGC
CATCTCTGCGCCTTCGGTGTTCCTAGCCTTCCCGGAGAACAAATCGAAAT
TTGAGGAAATGGGGCCCTCCACACCCACCTACCTACAACACCATCCGCAC
CAGACGGATTGGAGACAAGACAGTGCCTTAATACAGGAGACAAGACGTCG
TCTTGACATAGACTCCCTTGCGCACGCGCGATATTTCTGTTTTTTCATTA
TTTGCCAGTCGAGGTATGCGTGCCACCCAATGCTTGCGTGTGTATGTATG
AAGTTGAGTCGGAGGTGTGCTCGATCGAATGAGCGATGTTTTTTCTGTGG
GTTGGGTAGTTGTTCTCAGAATTTTCCACTGTTGACACAGCTGCGGGTGG
ATGCAGAAGTAGGATCCTGCACTGGAACACGAATACATTATGTGTACATA
ACGTATGGACGGATGCGAGCAGCCCCCCAGGGCCGAGTCAATCAGAGAGA
GGTTCATTCTGCCTTTCCTGCTTTGAAACATTTATTGAGCATCGCGTTCG
AGTCGATTTGCTTGATTATTATCATGAATTGTCTGCCATGTCTTGTCTAG
GTACCTCTTTGTGTACAAGTCTGTGACCGACCACGGAATGCGTTCGTGTC
AGGGTTGGGACCAAGCACGGACATTAAAAGGTGCTCAGCAGCATCCGGAA
ATCCATTCCGTGGTCAAGTAATTTATTCTATTTGGGGGGGAAGGAGGGAA
CTTCTAGCTTTTGGGGGGGGCGCAGATGGCATGGGTGCCGGAAAACGCTG
GTCCTGGTACATGATTTGGACTGCGGATGAAGACCCGGTTGACTCGGGTT
TCTGTGTACCCCAACTCATCGATGGACGGCAAGGACCTTCGGTTGCGGTC
ACAGTTGGTGCACAATATGGCACCTGGTCGGTGCACAATATGGCACCTGG
CCACGTATCTAGTTCTATAGTATACCGAGAAAGGGAGTGCGTTTTTCGTA
ATGTGATATCATCGATCGTCATTCCCAATGACCAATCATGGCAATATCTC
AAGGAACACAATCCCACTTACATAGTTGAGAGATGTTCCCCCCTGTCATT
GTGGACCGGAGTGAAGATGTAGGGTGAAGGTTGCTGATCGATGGTGATGA
AAGAGAGCAAGGCATAATTGCATATTTTTCGTAGATAGGGGTGAAGATAT
TTTAGTGAAGGTCAACACCAAATCTTTATGGAAGCAACGATGTGGCGGTT
GTTCGGGGGCCACAGTAGCAGTGTAGGGAAGCTCCTTGAAGAGGTAGGTA
TGTCCACGGCGCTGTCGAATGTGATC
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protein sequence of EsuBft1515_5a-0001

>EsuBft1515_5 ID=EsuBft1515_5|Name=EsuBft1515_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=142bp
MACMGSVSSPPGAIQGSQQSERYQACEASSKREIRHMSRKKAALHTLVRS
SAGLGGRRAMLALISVAHVDVVEGKWLIEFPSGFRCMWNDLPHGLQFAIL
LLMLGILYGVNRLFDKADEAIYTRLTCATAGLLNERRLHHAY
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mRNA from alignment at Scaffold_228:178006..185432+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1515_5a-0001 ID=EsuBft1515_5a-0001|Name=EsuBft1515_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=7427bp|location=Sequence derived from alignment at Scaffold_228:178006..185432+ (Ectocarpus subulatus male Bft15b)
GTCGCGGCAGCGCAGCGTTGGGTGTGCCCTTGCCCACAAGGAAGACAGAG
AGAGCATAAGGCGTGCCCAACGGCTCCGACCTGGCCGCCCCTGTGTTTAA
TTAATCCCCCTCTGTGTTTAAACAGTTGACAGCAGTCCCGTCCCGGTGAG
TTCGCGATGGCGTACATAAGTAGTCTCGCTCCAAGAGGTGCGGAGTGACG
AACTGATTGTTGCGCTCATTTTCGTTTATTTTGTTCGGGTCAAGCGGGCA
AGGTCCGTCATGGACAGCGGTGGTACACATCCGTCACAGACAGCGGTAGT
ATCACATCCCAACGAACCCCTATGGAGCCAGCGTTTGCCGGTATATCGCC
CGACTCTCAGCAGCAGTGGTCTCTTTTCGACGATGATTAATTGTTACACA
CAGGAGCGTGTACTTAGCCTCGAGTGTCTGGGTATGGTTGTGCCTCTTCG
TCGCCGTGTTTGTTTCTAGTAACATTCCCCGCACAAGAGTTTTTTCTTCG
CGAGAAAACGAATGAGGGCGCTTTCGCTTACCCCTCACCGTCCGGGACGC
GTACCCTCTCTACTCTCTCGGACAACTGTCTGCGCTGAGGCTGTATCTTG
GACTGAACATGTTTGTTGCATAGACTAGTGGAGTTCGTCGTGCTTGCTGC
GTCCATCCGTAGAAACAATGGGAGAAAAATGTTTCATTGCATCCCACTGG
TGCTTTTCTTGACACCATCTCTTGCTCGTTGGCAGATGTGGAACATGGCC
AGCCTTGTTCGCCGGGTGCACGCCAAAGGAGGTGAGACAGCTTTTCCGAG
GCGAAACGCCCACGTGATATAATTACGTGGTATCAGTTGTGCGTAAGTCT
TCCCTTGTCCCTCTGGGCAGTTGTGTTCAAGAGTCGGGAGCAAGCCGGGC
GGGGCGGAGGTGGTGGTTTCCTCCGGAAACACGTCACTGTCACGAAGGGC
CGCTTGGCAGGTTTGTTGACAAAGAGAAACGATCTTCATCCCTTTCTTTC
TGCTGTATCCATATATACTGCAATAATAAGAGCACGCGGCAGCTGTAGCT
TGTTGCTAGCGTAGGGGTTACAGCAGTGCGCGCGGGAGCCATGTGTCTGT
CCGGGGCATTGCACACCCCCGGAGCAACAGTAGCGTGGTTGGTTGCCCGA
GGTGTTGTCCCACGGGCGCATGCGGAGGAATCAGCAGCAAAGCCAAATAG
TTGCAGTGACACACAAGTACGCTGACGACACACAAGTAGCTGACGACGCG
GCCATCGTCTCGCTCACGCCGGAGAGCCTCGAAAAGATGATGTCCATCAT
CGTGCGCGTGGCCGGCCTGTTTGGACTGATGGTATCGGAGCCAAAAACGG
AGATCATGTGCATGCTACCGAAAGGGCTGGGGGAACGCCCGTTCGCGGTC
AGCGCCGCTGGCCAGACGTACAAGCAGACAGATCGGTTTGTGTACCTCGG
ACGTACCATCTGCGCGGATGGGAAGGTCGACCGGGAGATCACGAGCCGCA
TCTGCCGAGCATGGAAGTGCTACCGCCGGAACAGCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTTCTGTTTCTTCGTGGGGTCGTGTATGCCGGGTTT
TGAGACCACGGGCTCCCAATCTTTCTTTTGTAGAGCTAATGTGAGAAACA
ACAACAACAACAACAACAAGTCAGTTTGTGCCGCTTAGGCACATGAATAG
ACAGATTGTACGTCCACACACCAACCCACCTTACTATCTCCAACCGCACA
AGCGGTGTGAAGCATCGGAGAACCCACGCTTCCGAGCCGCGACTATCAAT
TGTCTCTCGCTGGGTTCTGTTCCACACTGCAAGACCTAAACATCAGCAAT
GAGCTTGGAGGGGGAGAGTAACGGAAGGACTTGCGTGACCTGATGAAAAC
ATGAACAGCGGTGGTGTCGCTATGGGGTGGGGTGGGCTGCTCGTTGTGTG
GTGTGTATATCAGCTCACACGCGAAAAAAGATGAAAACCGCGTGTGCTCC
GTCACACCTCGAAAACTTCATTATTTATTTGCATGGGGGGAAGGGTGCGT
TGTTCACAAGGTGTGTACTGTATGTCAACAAGATTCGGAGGAAAACGGCA
CGCCGGGTATACCGCAGGTGTTACGCATATCTAAACTTCAACCGCTGTAG
AATTACGGTCGACTTCAAGACACCCCTTGGTGTCAACGACTCGAATCGGT
AATGATTCGGTGATGAGCATGAACGACAATCTCGCTCAAAGGAACGGTTG
CAATGAACTGGCCGGCACTCTGTTGGTATCATTTGCAGACCCACAGCTCA
TGACAGCTCGGCCCAACAATCGGCACCTAGTGCCGCACAAACCGCAGGTT
GTGAGTGTTCGCAGCACGAAAAATGGAGTTTCTTCGTGTAGAATAGACCG
GGTCTGCCGTACTGGCTGCGTGTATTCCCCGTTTTGGTTGGTGGAAGCTT
CCACGGGAGCAACTGAAGCCTTTTTGGGGAAACCCGTCCAAGTTTTGGAA
TATTCCGCCATCTCCATGGAGGAAGTACTTCCGGGCGATTCATTCTCAAC
TGGTGCAAGGATTTAACGGTGGAAATGCCGCCGGATATGTTCAGTTCGAA
ATCTGACAGCTTCTGTAGAATTTACGAAAGGCCATTCATTGAGCTTCCCT
GCAAGTTATCTGAGCAGGTGAAATTGTCTCCGAACGCCCAACCTGTTGCA
AGATTGGTTCCCAAAGCCATGAAGAGGAACCCGTCTACATCGTTTATCGC
TACCAGTTTACCCTCCTCCGCAGACCTTATGTACGCAGGGCACAATCTCC
TACGACAAGAAGACTCCTTCGGTCTACGTAGTGGCACGTGACATGCCACA
AGAACGTGACATGCCACAAGATCAACCTTCGAAGCTTTTGGTTGTTCAAG
TGCCAGAACTCGCCCGTGAAGCATGACGTCCCCTACCACGGCGACGACAC
TTATGTCATCGTGTTGTCGACCCTTCAAGGCATGCTTCCATACAGCCTGC
GGTTATCTCACGGGGAACACAGGCTGCGGCGAGTCAATCGCCGGAATAAG
CTCCAGCAGTCACTGGTTCGTCCGCCTTTGGCCCTCGAAAACCTCCTCTC
ACCAGGTGTGCTAGTGAAATTCGAGTGGGCGCCAAGCCTACTGTTGTGGC
TTCTCGGGGTCGTTGGTGTTGGGAGCGTGCTGATGGCATGCATGGGGTCC
GTTTCCTCTCCACCAGGCGCTATTCAAGGCTCGCAACAATCGGAACGCTA
CCAAGCCTGCGAAGCCTCTTCGAAGCGCGAGATCCGACACATGTCTCGGA
AAAAGGCGGCATTGCACACCTTGGTTCGTTCGTCTGCCGGTCTTGGTGGC
CGCCGTGCTATGCTGGCCTTAATCTCAGTCGCCCACGTGGACGTGGTGGA
AGGCAAATGTGAGAGAGTGTGGTAAGCATTCACACCGACGATAGTTGAGG
AGCAGAGTTATGATTGGCGGTCATGGTGAAGCTCGGACCCCTCTGTACCG
GCAACGAACACGTGTTGGGATTCGATTGATTCGTTTCGACCTCTCCAACA
GACGGACCAATGAAGTGTTGCCAGACTTCGTAGGCGGCAAAGAACGCCAA
CTATTGCTGCTGTGTTGTTGTATACTTTTAGGTCGCACCAGCCGGGGTAC
TACTTGAGGAATGCACAGAAGTTTCCCCACCCTTCTTCGTGTCTTCCTTC
GACGGCATTTGACTTGATTCTTGTTTCTGGACGCCAGAAGGACAATATTT
TCTTCTTCCCACCCAATAACACGCGAATTTGTCGGTATTCACCCGTGTTT
TGCATTGAGTTGAGGAAACATTTTTCTAGTTCATGTGGTGATTGGGCCCG
AGATTCGAGACCACGCCCCCAACATTAGATACTTCACAGATTACATGGAA
ACAAACTGAGGGCGACCGATGGACCTCCTACGAGTTGTTTCTTTTCGCTC
TCATTCCAAACACTGCCGGAAATATTCACGTATTGTTTCAAGCAAGCGGA
GTTCTGTCGCCTCACGATTCACTAACTGGGTAACGAAGTCCTTGTCCCGT
CCCGTTGCTGATTTCGACCCGTGCCTCGCAGGGCTTATTGAATTTCCGTC
GGGGTTCAGGTGCATGTGGAACGACCTGCCGCACGGCCTCCAGTTCGCAA
TACTCTTGCTGGTGCGATCAGGTCTTGTCGTTGAATACGATATCGTTCTT
CAGGCAAAAATAGTTCATAGCGGTGATGCAACAAGCGTGTAGATCTCGAC
ACGTGCCTACTGCCGTCTGTATACTGCTGGCGCTTGTGTCGTAAACACAT
TCCAGCAGGAAGGGTCGTCTCACCTCCTCAACGTGACCACCGGGGTCTCG
GTCTCGAAGGCTCGAGTGTCTTTGAGTCGTAAACCGAAGTCTCGGTCTCG
ACGGCTCGAGAGTCATTGACATGTCAGCCGAATTTTTGGTCGCGAAGGCG
TGAATGCCGTTGAGTTGCCAACCGAGGAACGGATGTTCTAAATTGTGCAC
AATAATGTCTTCGGCTCACGCGCAGATGCTGGGGATTCTGTACGGAGTCA
ATCGACTCTTCGACAAAGCCGACGAGGCTATATACACTCGCCTGACCTGC
GCCACAGCAGGGCTACTGAATGAGAGGAGGCTCCACCACGCTTACTGAAT
ATCCTAGCCGATTCAATAGCGAAATCCGAGAGACGAAACGGAAGCCCTGC
AAAGGGTTTGGGTGTTGCTGCGAGCCTATATTGGCATTGACCATCGCTTT
CATTAGCGCACCGCGATTGCCCTCCTCGGTTGGCTGAAAGTTGCTGGAGA
CTAGGACGCCATCATATCTATTTTGTGAACGGCCGTTCCCTTGGTCAGCA
CCGGTGGCCCGTTTCTCGCTCGGTGTGGCAGCGAGAATACATGCATGGGG
CCATCTCTGCGCCTTCGGTGTTCCTAGCCTTCCCGGAGAACAAATCGAAA
TTTGAGGAAATGGGGCCCTCCACACCCACCTACCTACAACACCATCCGCA
CCAGACGGATTGGAGACAAGACAGTGCCTTAATACAGGAGACAAGACGTC
GTCTTGACATAGACTCCCTTGCGCACGCGCGATATTTCTGTTTTTTCATT
ATTTGCCAGTCGAGGTATGCGTGCCACCCAATGCTTGCGTGTGTATGTAT
GAAGTTGAGTCGGAGGTGTGCTCGATCGAATGAGCGATGTTTTTTCTGTG
GGTTGGGTAGTTGTTCTCAGAATTTTCCACTGTTGACACAGCTGCGGGTG
GATGCAGAAGTAGGATCCTGCACTGGAACACGAATACATTATGTGTACAT
AACGTATGGACGGATGCGAGCAGCCCCCCAGGGCCGAGTCAATCAGAGAG
AGGTTCATTCTGCCTTTCCTGCTTTGAAACATTTATTGAGCATCGCGTTC
GAGTCGATTTGCTTGATTATTATCATGAATTGTCTGCCATGTCTTGTCTA
GGTACCTCTTTGTGTACAAGTCTGTGACCGACCACGGAATGCGTTCGTGT
CAGGGTTGGGACCAAGCACGGACATTAAAAGGTGCTCAGCAGCATCCGGA
AATCCATTCCGTGGTCAAGTAATTTATTCTATTTGGGGGGGAAGGAGGGA
ACTTCTAGCTTTTGGGGGGGGCGCAGATGGCATGGGTGCCGGAAAACGCT
GGTCCTGGTACATGATTTGGACTGCGGATGAAGACCCGGTTGACTCGGGT
TTCTGTGTACCCCAACTCATCGATGGACGGCAAGGACCTTCGGTTGCGGT
CACAGTTGGTGCACAATATGGCACCTGGTCGGTGCACAATATGGCACCTG
GCCACGTATCTAGTTCTATAGTATACCGAGAAAGGGAGTGCGTTTTTCGT
AATGTGATATCATCGATCGTCATTCCCAATGACCAATCATGGCAATATCT
CAAGGAACACAATCCCACTTACATAGTTGAGAGATGTTCCCCCCTGTCAT
TGTGGACCGGAGTGAAGATGTAGGGTGAAGGTTGCTGATCGATGGTGATG
AAAGAGAGCAAGGCATAATTGCATATTTTTCGTAGATAGGGGTGAAGATA
TTTTAGTGAAGGTCAACACCAAATCTTTATGGAAGCAACGATGTGGCGGT
TGTTCGGGGGCCACAGTAGCAGTGTAGGGAAGCTCCTTGAAGAGGTAGGT
ATGTCCACGGCGCTGTCGAATGTGATC
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Coding sequence (CDS) from alignment at Scaffold_228:178006..185432+

>EsuBft1515_5a-0001 ID=EsuBft1515_5a-0001|Name=EsuBft1515_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=429bp|location=Sequence derived from alignment at Scaffold_228:178006..185432+ (Ectocarpus subulatus male Bft15b)
ATGGCATGCATGGGGTCCGTTTCCTCTCCACCAGGCGCTATTCAAGGCTC
GCAACAATCGGAACGCTACCAAGCCTGCGAAGCCTCTTCGAAGCGCGAGA
TCCGACACATGTCTCGGAAAAAGGCGGCATTGCACACCTTGGTTCGTTCG
TCTGCCGGTCTTGGTGGCCGCCGTGCTATGCTGGCCTTAATCTCAGTCGC
CCACGTGGACGTGGTGGAAGGCAAATGGCTTATTGAATTTCCGTCGGGGT
TCAGGTGCATGTGGAACGACCTGCCGCACGGCCTCCAGTTCGCAATACTC
TTGCTGATGCTGGGGATTCTGTACGGAGTCAATCGACTCTTCGACAAAGC
CGACGAGGCTATATACACTCGCCTGACCTGCGCCACAGCAGGGCTACTGA
ATGAGAGGAGGCTCCACCACGCTTACTGA
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