Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1515_4 |
| Protein domains | SignalP-TM |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 40 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1515_4a-0001 ID=EsuBft1515_4a-0001|Name=EsuBft1515_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=406bp|location=Sequence derived from alignment at Scaffold_228:170766..171256- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATGGTACGGAGCACAAGTCAAAAGGACATGTGCAGAAGACGCACTTC
AAGTGCAAAGGAGCTCACTGTCGCTCCGTCGGTGCACGCAACTCCCAGAT
CATACACAGAGTCCGGACCCATAAGAGAAGGGCTCTCTCTGAAGAGATGC
AATCTCAAAACTACCGACACGAAAGAATCATATTTGGAAATGCTCTGAAG
CCAAATGAACACCATTATTAGGACGGCGCGAAAAGAAATACGGGCAGCCC
TCCCTCCTGTTCGTTGGTATCCTCTTCCTCCTCCTGCTGTTGTTGTTCGA
GCTTGTCCACTGCTTCTCCTCCGTCGTCGGGATGATCCTCGATGGCGTCC
TCGTCCTACCCCTCGTCCTCTTGTTGTTCGGGGTCGTCTCCGTCGTAATT
CGTCGT back to topprotein sequence of EsuBft1515_4a-0001 >EsuBft1515_4 ID=EsuBft1515_4|Name=EsuBft1515_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=65bp
MMVRSTSQKDMCRRRTSSAKELTVAPSVHATPRSYTESGPIREGLSLKRC
NLKTTDTKESYLEML back to topmRNA from alignment at Scaffold_228:170766..171256- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1515_4a-0001 ID=EsuBft1515_4a-0001|Name=EsuBft1515_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=491bp|location=Sequence derived from alignment at Scaffold_228:170766..171256- (Ectocarpus subulatus male Bft15b)
ATGATGGTACGGAGCACAAGTCAAAAGGACATGTGCAGAAGACGCACTTC
AAGTGCAAAGGAGCTCACTGTCGCTCCGTCGGTGCACGCAACTCCCAGAT
CATACACAGAGTCCGGACCCATAAGAGAAGGGTAAGTCCCCCACGCGCAT
GACACCACCTACGATGTCGAATCGAACGAAATTCACTCAACATTTCCACT
CATACCAAACCCGCAGGCTCTCTCTGAAGAGATGCAATCTCAAAACTACC
GACACGAAAGAATCATATTTGGAAATGCTCTGAAGCCAAATGAACACCAT
TATTAGGACGGCGCGAAAAGAAATACGGGCAGCCCTCCCTCCTGTTCGTT
GGTATCCTCTTCCTCCTCCTGCTGTTGTTGTTCGAGCTTGTCCACTGCTT
CTCCTCCGTCGTCGGGATGATCCTCGATGGCGTCCTCGTCCTACCCCTCG
TCCTCTTGTTGTTCGGGGTCGTCTCCGTCGTAATTCGTCGT back to topCoding sequence (CDS) from alignment at Scaffold_228:170766..171256- >EsuBft1515_4a-0001 ID=EsuBft1515_4a-0001|Name=EsuBft1515_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=198bp|location=Sequence derived from alignment at Scaffold_228:170766..171256- (Ectocarpus subulatus male Bft15b)
ATGATGGTACGGAGCACAAGTCAAAAGGACATGTGCAGAAGACGCACTTC
AAGTGCAAAGGAGCTCACTGTCGCTCCGTCGGTGCACGCAACTCCCAGAT
CATACACAGAGTCCGGACCCATAAGAGAAGGGCTCTCTCTGAAGAGATGC
AATCTCAAAACTACCGACACGAAAGAATCATATTTGGAAATGCTCTGA back to top
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