EsuBft1456_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1456_2a-0001 ID=EsuBft1456_2a-0001|Name=EsuBft1456_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1885bp|location=Sequence derived from alignment at Scaffold_228:86995..89647- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GCTTCCCCGGCGCCCAGAACGACAAGACCATCATCAAATTCGACAAGTTC
GCGATGGCGGTTCGAAACGGCTGGTACAAGGACGTAGAGTACACTCTGAA
GGGCGAGGACGGAGCGGACATCAAAGAGAAAGGGCCATGGTTGATAGTGG
ACGGCGGATATCACAACTGGAAGCAGCTCCAGAGTCCGATCAGGGCGCCA
TCAAACAAGGCCGAGTCAGGGTTCAAGAGACAGCTCGAGAGCGTCCGCAA
GGACTCGGAGTGCTGCTTCGGCGTCGTCAAGGGGCGGTTCAGGATCTGCA
AGATGCAGTTCCTCTACAGGAAGAAAGAGAGGATCGACAACATCTTCTTC
ACGTGCATCATACTGCACAACATGCTTCTCGCCTACGACGGGATCGAGCT
CTTGGAGCCGGACTGCGACTGGGCCGGAGCGGACGGCGACCTCGACAAAA
ACATCGAGCACCCTGTAGTGCGGATGAGTGCGCCCACGCACGAGGATGCA
GTCGTGGAGTGTGATGACGGCTTCGACGCATTGAGGCAGAAGTTGGTGAC
CAACTTCGCTTACCGATGGGGACAGGGGACCGTTGGGTGGAAGAGGTCGT
GATGACCCGTGGGAAGTCACATGGTGCTATGTTGATGGCGGGGAGGTAGG
GGGGCGGGGGGGCGTGTGGCAGGCGTTGTCCGCCCCTTCGGCTGTAATTA
GTGGCACTTTTTTTTTCCCCCGTTAAAGACCACGTCCTTCTCCGCCCCTC
CGTCGTCAGCATCGTCATCTTTCGTTTTTGGTCCTTCTTGCCAAGTCTTG
CCTCTGCCTTTGCCTGGGCCTTGTTGATACTTTGCCGTGTTATTGTTGTC
TCCTCGTCGTATGTGATCTCTATTATTATTTCGTATTTGGCCTGTTTTCG
ATTCGCCTTTCCGCGGCTTGCGCGTCTTGGCTCTTAGCATACTACAACTG
TCTGTATTCTTGCGTATTGTCATCAGATTTGGCATTTGTGTCTCGGTGTA
CTTTCTTTTCTCTGTCCATCTTTGCACCTTTTTGCGTGATGGGTGTGGAA
CAGCCTCTAGTTTAGGCGGAGTTTTCTTCCCTCTTCTGGAGCAGGACTGT
CTTTTGTGTGCTTGCTCTTCGCCACATTTATTATTGTGCCCCGAGGGGTT
AGCCCCATCGGGTTTCAGATTGTTTTAGTATCATGACGCGTGCGTATAAT
AGTTTTGTTTATTTTCTTTGCGGTTGCGACTGTATCCAAGTGTGATTACA
GGCTCCGTGGAGTTTCCTTTGCCTTTTGCGTTGCCTTGTTGGGACCTTGC
GTTTGCCGTATTGTTGTTGTCTCCTCGTAATCGTATCTCGATATGTTTTT
TTTTTCTTTCGTGTCTAGCCTGTTTTCGCTTCCCTCGTCCGCGGCTTGCG
CGTCTTCGCCCTTCGCATGCAACTGTCGGCGTGTCTTGGGTGTCTCGATG
GATTTACTTTTCTCGGTCCATCCTTGCACCTTCTTTCAACTAACCTTATT
TTTTATTCTGACGGGTGCGGGAAGCCTCTAGGCTATGTAGCCGGAGCTTC
CTTCGCTCTGCTGGCGGAGGACTGTTTTTTTCGCAGCATTATTTTTGTGT
CCCGATTAGACTCAGCACGGTTCGGTTTGTGTTAGCATCGCATGACGCGT
GCGCACAATAATTTTGTTTCTTTTTTTTGCGGGGTCGAGTGTACCCACAT
GTGTGGCCACAGGCTCCAACGGATGTTTTGGAAAAGAGAGCTACAGCAGT
ACATGCCACGACACCGAAAAACGAAACGTGCACCTGCACAATTTGTGGTT
TAGTGGTCCGGCAGGTTAAAACTTGTCATGCACGTCATGTTGTGTGCAGG
GTGGCGAAACACCGGTACTGCTGTGTTGGCCCGTA
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protein sequence of EsuBft1456_2a-0001

>EsuBft1456_2 ID=EsuBft1456_2|Name=EsuBft1456_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=182bp
MAVRNGWYKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPS
NKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFT
CIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTHEDAV
VECDDGFDALRQKLVTNFAYRWGQGTVGWKRS
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mRNA from alignment at Scaffold_228:86995..89647-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1456_2a-0001 ID=EsuBft1456_2a-0001|Name=EsuBft1456_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2653bp|location=Sequence derived from alignment at Scaffold_228:86995..89647- (Ectocarpus subulatus male Bft15b)
GCTTCCCCGGCGCCCAGAACGACAAGACCATCATCAAATTCGACAAGTTC GCGATGGCGGTTCGAAACGGCTGGTACAAGGACGTAGAGTACACTCTGAA GGGCGAGGACGGAGCGGACATCAAAGAGAAAGGGCCATGGTTGATAGTGG ACGGCGGATATCACAACGTGAGCGGGCTCGTGTTCCACCGAATTTGTAGT GCAGAATGTCTTTCTTTGCACTCGGCGCGCGCGCAAGGTTTGGTGTTCCG TTAGCTAGCATTAAGTAGCGTTTAGGAACAGGAGACGAAACAACAGAGAG TCGCTACTGCTGTGCCTTGAAAACTACAGATCTTGGCCCATGTCGCTTCC CCAACGTGCTGTGGTACCGGACAGGGGTTGCATTTGTTCAATTTCGGATG TGTTTTCATGTATATCACTGCACGCGTTCGCTACGGCAGTTTTGCGTTAT ATACCGTAGTTTGGTCGCTGCTCCCTCTGGCAGGTGCTTTTTTTTTGGGT GGATTGACAGACAGACGCTGTATATGCAAAGGTGCCTCCAAAAAAAAAGA GACGCCCAGAGGGGTCCGCGCGGTCCCCGCAAGATGTCAGTGTTAAAACG GTTCGGCAGTGTGAATTGACAACCGACAATTTGGATGCCAGCCAATGCTT CCACCGAAGCGTGTCTTCGTACGTGCTTGTCTGCCTGCTTGTAAGCGAGT TCGTGTACCTGTTGGCTTTCCCCCCGTGACGATGGTGGGGGAGACTGAAC CCCCCCTTGTGTAAATTTCGGAATCTCACGGTCGTCGTCAGGGCGGAATG TGATGGTGGTTGATGTGCTGTTCTGCGGTAATAAACAGCGGTCCCCATGT GCGTCTTCAAGGCTTGACTCAATTGTCGTACCCTTAACATGATCCCCACG GCCCGCCCACCCGCCATGGCTCCCTCCTTGCTCAGTGGAAGCAGCTCCAG AGTCCGATCAGGGCGCCATCAAACAAGGCCGAGTCAGGGTTCAAGAGACA GCTCGAGAGCGTCCGCAAGGACTCGGAGTGCTGCTTCGGCGTCGTCAAGG GGCGGTTCAGGATCTGCAAGATGCAGTTCCTCTACAGGAAGAAAGAGAGG ATCGACAACATCTTCTTCACGTGCATCATACTGCACAACATGCTTCTCGC CTACGACGGGATCGAGCTCTTGGAGCCGGACTGCGACTGGGCCGGAGCGG ACGGCGACCTCGACAAAAACATCGAGCACCCTGTAGTGCGGATGAGTGCG CCCACGCACGAGGATGCAGTCGTGGAGTGTGATGACGGCTTCGACGCATT GAGGCAGAAGTTGGTGACCAACTTCGCTTACCGATGGGGACAGGGGACCG TTGGGTGGAAGAGGTCGTGATGACCCGTGGGAAGTCACATGGTGCTATGT TGATGGCGGGGAGGTAGGGGGGCGGGGGGGCGTGTGGCAGGCGTTGTCCG CCCCTTCGGCTGTAATTAGTGGCACTTTTTTTTTCCCCCGTTAAAGACCA CGTCCTTCTCCGCCCCTCCGTCGTCAGCATCGTCATCTTTCGTTTTTGGT CCTTCTTGCCAAGTCTTGCCTCTGCCTTTGCCTGGGCCTTGTTGATACTT TGCCGTGTTATTGTTGTCTCCTCGTCGTATGTGATCTCTATTATTATTTC GTATTTGGCCTGTTTTCGATTCGCCTTTCCGCGGCTTGCGCGTCTTGGCT CTTAGCATACTACAACTGTCTGTATTCTTGCGTATTGTCATCAGATTTGG CATTTGTGTCTCGGTGTACTTTCTTTTCTCTGTCCATCTTTGCACCTTTT TGCGTGATGGGTGTGGAACAGCCTCTAGTTTAGGCGGAGTTTTCTTCCCT CTTCTGGAGCAGGACTGTCTTTTGTGTGCTTGCTCTTCGCCACATTTATT ATTGTGCCCCGAGGGGTTAGCCCCATCGGGTTTCAGATTGTTTTAGTATC ATGACGCGTGCGTATAATAGTTTTGTTTATTTTCTTTGCGGTTGCGACTG TATCCAAGTGTGATTACAGGCTCCGTGGAGTTTCCTTTGCCTTTTGCGTT GCCTTGTTGGGACCTTGCGTTTGCCGTATTGTTGTTGTCTCCTCGTAATC GTATCTCGATATGTTTTTTTTTTCTTTCGTGTCTAGCCTGTTTTCGCTTC CCTCGTCCGCGGCTTGCGCGTCTTCGCCCTTCGCATGCAACTGTCGGCGT GTCTTGGGTGTCTCGATGGATTTACTTTTCTCGGTCCATCCTTGCACCTT CTTTCAACTAACCTTATTTTTTATTCTGACGGGTGCGGGAAGCCTCTAGG CTATGTAGCCGGAGCTTCCTTCGCTCTGCTGGCGGAGGACTGTTTTTTTC GCAGCATTATTTTTGTGTCCCGATTAGACTCAGCACGGTTCGGTTTGTGT TAGCATCGCATGACGCGTGCGCACAATAATTTTGTTTCTTTTTTTTGCGG GGTCGAGTGTACCCACATGTGTGGCCACAGGCTCCAACGGATGTTTTGGA AAAGAGAGCTACAGCAGTACATGCCACGACACCGAAAAACGAAACGTGCA CCTGCACAATTTGTGGTTTAGTGGTCCGGCAGGTTAAAACTTGTCATGCA CGTCATGTTGTGTGCAGGGTGGCGAAACACCGGTACTGCTGTGTTGGCCC GTA
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Coding sequence (CDS) from alignment at Scaffold_228:86995..89647-

>EsuBft1456_2a-0001 ID=EsuBft1456_2a-0001|Name=EsuBft1456_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=549bp|location=Sequence derived from alignment at Scaffold_228:86995..89647- (Ectocarpus subulatus male Bft15b)
ATGGCGGTTCGAAACGGCTGGTACAAGGACGTAGAGTACACTCTGAAGGG
CGAGGACGGAGCGGACATCAAAGAGAAAGGGCCATGGTTGATAGTGGACG
GCGGATATCACAACTGGAAGCAGCTCCAGAGTCCGATCAGGGCGCCATCA
AACAAGGCCGAGTCAGGGTTCAAGAGACAGCTCGAGAGCGTCCGCAAGGA
CTCGGAGTGCTGCTTCGGCGTCGTCAAGGGGCGGTTCAGGATCTGCAAGA
TGCAGTTCCTCTACAGGAAGAAAGAGAGGATCGACAACATCTTCTTCACG
TGCATCATACTGCACAACATGCTTCTCGCCTACGACGGGATCGAGCTCTT
GGAGCCGGACTGCGACTGGGCCGGAGCGGACGGCGACCTCGACAAAAACA
TCGAGCACCCTGTAGTGCGGATGAGTGCGCCCACGCACGAGGATGCAGTC
GTGGAGTGTGATGACGGCTTCGACGCATTGAGGCAGAAGTTGGTGACCAA
CTTCGCTTACCGATGGGGACAGGGGACCGTTGGGTGGAAGAGGTCGTGA
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