Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1002_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 73 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1002_3a-0001 ID=EsuBft1002_3a-0001|Name=EsuBft1002_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=739bp|location=Sequence derived from alignment at Scaffold_228:54235..55389- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGGGGTGGCAGTGTCGAGGGTCCGGGGGAACATGGGCTTGAATGGGGG
TTGCCTCAGAAAGAGCAAGACGGCGGGTGTTTCTCTCTTGGTTTGACCGG
TGGCAACATCGATCAGCAATGCCGCACAGACTTTTGCGCGCCGAAACATG
CGTGCGACAGCTTTAACCTAACCACTTCGGTGGAAAGAGGATTTCTGTTC
GATACGGTGTCGGGAGTGCTGAGGGGGAAGGGCTTGACCCTTGTGCTTGC
AGATGGCGAGGAAGTAGGAACAGGGGGTGGCGGTGTCGGGGGTCCGGGGG
AACATGGGCTTGAGTGGGGGGTGCCTCAGAAAGAGCAAGACGGCGGGTGT
TTCTCTCTTGGTTTGACCGGTGGCAGTATCGATCAGCAATGCCGCACAGA
CTTTTGCGCGCCGAAATATGCGTGCGACAGCTTTAACCTAACCACTTCGG
TGGAAAGCGGATTTCTGTTCGATACGGTGTCAGGGGTACCAGGGAAGACG
GGGCCGACTTTTGTTTTATTTCGGGTGGATGAGGTTGGGGTTTTGTTCGT
TTTTCTCCATCTAAGGTTCGTGCCTAGAGTTCAGCTGTATGTTTCAACCA
AAGTTTTGTTGACTTAGAGGCAAACATTCCTAGCTATTGGGCATCGAGTT
AATTTGGCTTGGCATGACGGCCTTTACGATCGACTTTTTATGTATGTCTG
CATTTATCTGCAATTGTCGGAGGGCAAACAAAATAATAA back to topprotein sequence of EsuBft1002_3a-0001 >EsuBft1002_3 ID=EsuBft1002_3|Name=EsuBft1002_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=31bp
MGVAVSRVRGNMGLNGGCLRKSKTAGVSLLV back to topmRNA from alignment at Scaffold_228:54235..55389- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1002_3a-0001 ID=EsuBft1002_3a-0001|Name=EsuBft1002_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1155bp|location=Sequence derived from alignment at Scaffold_228:54235..55389- (Ectocarpus subulatus male Bft15b)
ATGGTAGGGATTGAGCTTCTTATGTTGAAAATAAAACCCACACAACACAC
CGACGACGCGACATATTTTTTTGCCTCGTCGCCCTGTTACAATTCACTAC
CCTCGCGGTTTCCGTCTACATAGAGTACAAGTGGATGTTCGGATCTACAA
TACTATAGGAACAGGGGGTGGCAGTGTCGAGGGTCCGGGGGAACATGGGC
TTGAATGGGGGTTGCCTCAGAAAGAGCAAGACGGCGGGTGTTTCTCTCTT
GGTTTGACCGGTGGCAACATCGATCAGCAATGCCGCACAGACTTTTGCGC
GCCGAAACATGCGTGCGACAGCTTTAACCTAACCACTTCGGTGGAAAGAG
GATTTCTGTTCGATACGGTGTCGGGAGTGCTGAGGGGGAAGGGCTTGACC
CTTGTGCTTGCAGATGGCGAGGAAGTAGGAACAGGGGGTGGCGGTGTCGG
GGGTCCGGGGGAACATGGGCTTGAGTGGGGGGTGCCTCAGAAAGAGCAAG
ACGGCGGGTGTTTCTCTCTTGGTTTGACCGGTGGCAGTATCGATCAGCAA
TGCCGCACAGACTTTTGCGCGCCGAAATATGCGTGCGACAGCTTTAACCT
AACCACTTCGGTGGAAAGCGGATTTCTGTTCGATACGGTGTCAGGGGTAC
CAGGGAAGACGGGGCCGACTTTTGTTTTATTTCGGGTGGATGAGGTTGGG
GTTTTGTTCGTTTTTCTCCATCTAAGGTTCGTGCCTAGAGTTCAGCTGTA
GTGTTTCAAGCAAAGTTTTATTGACTTAGAGGTAATCATTCCTAGGTATT
GGGGATCGAGTTAAGTTGGCTAGCCATGACGGCCTTTACGATCGACTTTT
TATGTATGTCTGCATTTATCTGCANAATTCTGTTCGATACGGTGTCAGGG
GTACCAGGGAAGACGGGGCCGACTTTTGTTTTATTTCGGGTGGATGAGGT
TGGGGTTTTGTTCGTTTTTCTCCATCTAAGGTTCGTGCCTAGAGTTCAGC
TGTAGTGTTTCAACCAAAGTTTTGTTGACTTAGAGGCAAACATTCCTAGC
TATTGGGCATCGAGTTAATTTGGCTTGGCATGACGGCCTTTACGATCGAC
TTTTTATGTATGTCTGCATTTATCTGCAATTGTCGGAGGGCAAACAAAAT
AATAA back to topCoding sequence (CDS) from alignment at Scaffold_228:54235..55389- >EsuBft1002_3a-0001 ID=EsuBft1002_3a-0001|Name=EsuBft1002_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=96bp|location=Sequence derived from alignment at Scaffold_228:54235..55389- (Ectocarpus subulatus male Bft15b)
ATGGGGGTGGCAGTGTCGAGGGTCCGGGGGAACATGGGCTTGAATGGGGG
TTGCCTCAGAAAGAGCAAGACGGCGGGTGTTTCTCTCTTGGTTTGA back to top
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