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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Seed ortholog | 2880.D7FGW5 |
| ProteomeId | EsuBft1154_2 |
| Protein domains | G3DSA |
| Protein domains | IPR017441 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 84 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.05e-152 |
| EggNOG OGs | KOG0613@1|root,KOG0613@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG ko | ko:K06491 |
| KEGG Pathway | ko04514,ko05020,map04514,map05020 |
| Description | cytoskeletal protein binding |
| COG category | S |
| BRITE | ko00000,ko00001,ko00536,ko00537,ko04090,ko04131,ko04516 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0005524 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1154_2a-0001 ID=EsuBft1154_2a-0001|Name=EsuBft1154_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=846bp|location=Sequence derived from alignment at Scaffold_106:312258..314126+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTGCTTGTTGCGTCAGACCTCCGAGGAGCGGCGCCTGAGGCACCTCGT
TGGTCTGGCCATCGATCTGAACACCGCCGAGGCAAGCGTTCTGCAGGGAG
AGGAGGCACGCCCCGTGGTTGCTACTATGAAAGGCCTGGCTGGCCAGCTT
GCGACGGTCGGGCCGGAACCTTTGTCGGTTATCGACGATGCTAATAACCA
GATGTTCGACCTGAAGGCTCAGGAGTCAAACCTCCAACACGTACTCCTAG
GGCGCAATCGTGACCTCGAAGCGCAAGTAGCACAAGAAAAAGACCAGAAC
TGGTCTCTGGGGGGAAGGGCAGGTGCTTCTCTGGAACTTCAGAAATCCCA
CCTTCTGCAGCGCATCAAGGTGCACAACAAGTTCATGGTGGACTTGCTGG
GCTTCATGGACAAGAAGAAGGCGGTGGTGAGGCGCGCCGTACTTCGCTTG
GAGGCTGCTCTAGCGACGTGCGATGCACGGGATAAGGTTATTTCGGCTGC
AGACGAGAGAGTGGCCAAGGACATATTAGAGCTAGTAGATCGCGCGCAGA
ACAAGGAACCAGTCGCAGCTCCGGTGGAACCCCCCGCTAACTCCGTCACC
ACGGCGCTCAACAAGTGGGTCGAAGGAAGCTTCTTCAAACGGTTCGTGGC
GCGCACCATGGCAAGGAACAACGTGGACGCCACCTTCTTGGCTACACGAG
CTCTGTCGCCGGTGGATACGTGGTACGTGCTATCCACTTGCCTGGGACGA
GGAACTTTCGGTGGCGTCTTCAAGATAGACGTCCTCACCCTGGGGGAGAG
CTTCGCCATGAAGCTAATCAATGAGCCATTGCAAAGCGTTCGATGA back to topprotein sequence of EsuBft1154_2a-0001 >EsuBft1154_2 ID=EsuBft1154_2|Name=EsuBft1154_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=281bp
MCLLRQTSEERRLRHLVGLAIDLNTAEASVLQGEEARPVVATMKGLAGQL
ATVGPEPLSVIDDANNQMFDLKAQESNLQHVLLGRNRDLEAQVAQEKDQN
WSLGGRAGASLELQKSHLLQRIKVHNKFMVDLLGFMDKKKAVVRRAVLRL
EAALATCDARDKVISAADERVAKDILELVDRAQNKEPVAAPVEPPANSVT
TALNKWVEGSFFKRFVARTMARNNVDATFLATRALSPVDTWYVLSTCLGR
GTFGGVFKIDVLTLGESFAMKLINEPLQSVR back to topmRNA from alignment at Scaffold_106:312258..314126+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1154_2a-0001 ID=EsuBft1154_2a-0001|Name=EsuBft1154_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1869bp|location=Sequence derived from alignment at Scaffold_106:312258..314126+ (Ectocarpus subulatus male Bft15b)
ATGTGCTTGTTGCGTCAGACCTCCGAGGAGCGGCGCCTGAGGCACCTCGT
TGGTCTGGCCATCGATCTGAACACCGCCGAGGCAAGCGTTCTGCAGGGAG
AGGAGGTGGGTGCTGCACGCGGTTTTTCAGCCTCGAAGACCGAGGATACA
ATTGAACAACGAGAAACACGCAGCAGCCCCATGTTTTCTCGAATCTGCTG
CCGCTGTCTTCAGCGAAGCGGCCATCGTCCGCATACAGGCATTTCGTTCG
CCCTGTTAGCACCCTTGACCTATCCAACACAACCACTCGCTAGCTCCAAG
TCACGTCTCTACCGTCACGTGGCCGTGCTCAACATGAGTGCGGTCGTAAC
GGACTACACCAGACCCTCGCACACCACTGCATCAATACTATCCGTGCACC
ACTTATTGCATGCCTACCGCCCGCCGTGGGGTTGACAATCCCCAACCACA
CCCCGCCACACTGCTCGCCGGGTCCCGTTGACCAGGCACGCCCCGTGGTT
GCTACTATGAAAGGCCTGGCTGGCCAGCTTGCGACGGTCGGGCCGGAACC
TTTGTCGGTTATCGACGATGCTAATAACCAGATGTTCGACCTGAAGGCTC
AGGAGTCAAACCTCCAACACGTACTCCTAGGGCGCAATCGTGACCTCGAA
GCGCAAGTAGCACAAGAAAAAGACCAGAACTGGTCTCTGGGGGGAAGGGC
AGGTGCTTCTCTGGAACTTCAGAAATCCCACCTTCTGCAGCGCATCAAGG
TGCACAACAAGTTCATGGTGGACTTGCTGGGCTTCATGGACAAGAAGAAG
GCGGTGGTGAGGCGCGCCGTACTTCGCTTGGAGGCTGCTCTAGCGACGTG
CGATGTGAGTGTCTACCAAGGCAGTAGAAAGCAGGATAGCGTTACCAGTC
TCTCGCTTCTCCCAAGGGGGCTCTGAAAAAGAGTACGTGCGGCACCACAT
CGGGAGCCATCCTCGTTAGTAGGGAATGGCTCTTCTCGGGCCATCCGAAC
ACCTATGCCCTACCCCCACTGTAATGAAATTTCCCAAAACAAGCACCCGG
CGACGTCACTCTCCCCTCACATTCAACGGCAGTGAAAAATTCCACTTTTT
GACTGGAAACAGGCACGGGATAAGGTTATTTCGGCTGCAGACGAGAGAGT
GGCCAAGGACATATTAGAGCTAGTAGATCGCGCGCAGAACAAGGTGAGGG
TACTACACTCGGGAAAAGTAGGTTCGGCAGAAAGGTTCCCTGTGTAACAA
TGGTGTTGCTGCCTCACACGCACAGAGATTGCACGAGATTCAACACCCTG
TGTGATTTTCGGCAATAGTGTCAACAAGATGGGGCTTCTTGTAACCTGTT
TTTGCTCATTTGGCGTCTCGCGGTATCCCTCGCGCGTTCGACAGTGTTCG
TCATCGTCGCCGCAAGCAACAACAGACTGCGCATGCGATGTTTCGAAGCT
TCAGCCGCAAGGGTCGGTGATAATGACTACCTGCCCCATGCCCTTGGCAA
TGGAACCGCTGCTCGTCCAGGAACCAGTCGCAGCTCCGGTGGAACCCCCC
GCTAACTCCGTCACCACGGCGCTCAACAAGTGGGTCGAAGGAAGCTTCTT
CAAACGGTTCGTGGCGCGCACCATGGCAAGGAACAACGTGGACGCCACCT
TCTTGGCTACACGAGCTCTGTCGCCGGTGGATACGTGGTACGTGCTATCC
ACTTGCCTGGGACGAGGAACTTTCGGTGGCGTCTTCAAGATAGACGTCCT
CACCCTGGGGGAGAGCTTCGCCATGAAGCTAATCAATGAGGTAGGTGTGA
TACCTCCGTGTTGGTGCACTGGTTGCTCTTGATGGTGATCATGTGTAGCC
ATTGCAAAGCGTTCGATGA back to topCoding sequence (CDS) from alignment at Scaffold_106:312258..314126+ >EsuBft1154_2a-0001 ID=EsuBft1154_2a-0001|Name=EsuBft1154_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=846bp|location=Sequence derived from alignment at Scaffold_106:312258..314126+ (Ectocarpus subulatus male Bft15b)
ATGTGCTTGTTGCGTCAGACCTCCGAGGAGCGGCGCCTGAGGCACCTCGT
TGGTCTGGCCATCGATCTGAACACCGCCGAGGCAAGCGTTCTGCAGGGAG
AGGAGGCACGCCCCGTGGTTGCTACTATGAAAGGCCTGGCTGGCCAGCTT
GCGACGGTCGGGCCGGAACCTTTGTCGGTTATCGACGATGCTAATAACCA
GATGTTCGACCTGAAGGCTCAGGAGTCAAACCTCCAACACGTACTCCTAG
GGCGCAATCGTGACCTCGAAGCGCAAGTAGCACAAGAAAAAGACCAGAAC
TGGTCTCTGGGGGGAAGGGCAGGTGCTTCTCTGGAACTTCAGAAATCCCA
CCTTCTGCAGCGCATCAAGGTGCACAACAAGTTCATGGTGGACTTGCTGG
GCTTCATGGACAAGAAGAAGGCGGTGGTGAGGCGCGCCGTACTTCGCTTG
GAGGCTGCTCTAGCGACGTGCGATGCACGGGATAAGGTTATTTCGGCTGC
AGACGAGAGAGTGGCCAAGGACATATTAGAGCTAGTAGATCGCGCGCAGA
ACAAGGAACCAGTCGCAGCTCCGGTGGAACCCCCCGCTAACTCCGTCACC
ACGGCGCTCAACAAGTGGGTCGAAGGAAGCTTCTTCAAACGGTTCGTGGC
GCGCACCATGGCAAGGAACAACGTGGACGCCACCTTCTTGGCTACACGAG
CTCTGTCGCCGGTGGATACGTGGTACGTGCTATCCACTTGCCTGGGACGA
GGAACTTTCGGTGGCGTCTTCAAGATAGACGTCCTCACCCTGGGGGAGAG
CTTCGCCATGAAGCTAATCAATGAGCCATTGCAAAGCGTTCGATGA back to top
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