EsuBft1180_11a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1180_11a-0001 ID=EsuBft1180_11a-0001|Name=EsuBft1180_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3008bp|location=Sequence derived from alignment at Scaffold_106:234836..239497- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TGCTGCCTGCAAAAACGTTTCTTATAACGAATCGGTTTTTCTTTTGGAGT
TGGTGCCTCTTTGCGGCGGCGTTCGTATTTTCAAACGCGTGCACTGCTGT
TGTGCCGCACGGGCGCGGGAATTTGAACACACGCGGGCGGAACAGACGTA
GCTCTCAGACTCCCAGCACGCCGGTGTACAGACCTCCCACGCCATGCCGG
CTACGTAATCTCTGCTGCTAGACAAGATCCCCCTGTTGACGGTGGCTTTG
GAGTTGTTTAGTTCCGGAATCGGCGATGGATTGACGATGAAGGAAGTTGT
CAGGCAGCTGCAGACGGTCGCTCTCTGCTATACCGCGATGGGAGTCAAGA
GGAACGCAGGAGAGATAGACAGCAAGAAGAGAGAGGCGCTGCTACTCAAG
GCATACAAGGACGACGTCGTGCCTGGCTTTCTGAAATGGTTGTCGGAGGA
GGGTGATTGTACAACCCCGCCCTGGCTGACGATGGAGATGATGGGCCGGG
TTGCTGTACATACATGTAGGCACCAATGGCACAGGAACGCCGGTGCGGAA
GAGCAAGGGGAAAGAGAAACAGCAGCAACCGAAAGTCTATATGAAGAACC
AAAGCTGTACAAGGACGGGAAGAAGATCTGGGCAAGGTACCTGGATGCCT
TCCGCGACATCAGGAAGGACGCCAACCCCGTGTACGACAAAACCATCGGG
GACCAACCGGGCGGGACCCCTCCATCTGGAGAGCAGTATGCCGACCAGCT
TGACGAGTTACTGCAGGCGTTGTGGGAATACCAATGCAGAGAAAAAAATA
AAACCGTGGAAGTGACCGCGGAGGAGAAGGAATTCTTGCGCGCACGTGGC
CCCTCGGCGGCGAAGGGCAAGGGTACGGGAAGCGGTTCCTCGGCCGTCGA
CGTAGACCTCTCTTCCACGGACGGGGAGGTCGTACAAGGTACGGAGAAGG
AGGGAGGGGGTGCGGACGCGGGGAAGGATGAGGAGGTGGCGGCGGGGGCG
GGGAGGGCGGCGGGTTCTGAGGGAATCGACGGTTCTGGCGACGGTGGCGC
GGGACGGGAAGGGCAGCCCATGGAACAGGAGCAGCCGAAAACCCCAGGAG
AAGAAGACGACGGCGGCTCTGAACCGGAGTCAGTCGTCCAATATCCCGAG
AGGCCTCCCAATTGGATGCCCTACTATTTTCTCACCTTTTGCTTCTTTGG
TAGGCCCAGCAACAGCGAGGACACGGACCTTGCAATGAAAGCTGGATCTG
GCCCCTCTGGAGATTCTCGTCCGCGGAAGAAAAATAAAGCTTCTTTGGGC
TCGTCCAGCGACGGGGGGAGTGGGAGCGAGGGGGGTGCATCGGACCCCGC
CGCGAACTTGGGCAGGGCCGGCGTTAAGCAGTTCGTCGGTGCCGGGGAGG
CGCAGAGTCGGGCCCAGGTTAAAAAGGCAATGGCAAAGGACGCAGCCCAA
CAGTCGGCGGAGACCATACGAAGGGAGGGACTGGAGTTGGCAAAGCAGCA
GGCCGAGATATCGAGGTCGGTGGCTAAAGCAGTGGCGCAGGTGGCTGCCG
ATGTGCAAAGAGGCAGGGAGCTGAGCGAACAGGAGGCTGGCCGCAAGCGC
AAGCTGGAAGAAGAGGAAGCATGCCGGAAGCGCAAGGCTCAAGCGAAGGA
CGATCTGAAAGGCGAACTGGACCGTCTCGATCCAGACGACGAGGACAACA
CCGCACGGCGCGCGCAAATCAAGCGGGATCTTGCTAAGCTGTACAGAACC
CCTGTCAGCAAATTTACTGCTGATGCTGCCACCTCCAACCCAACGAGCAC
GCCGGCCGTGGCGCCGGCCAATGCGTCAGGCTTGCCGGCGACGTCGTCGG
GTGTGGCATCTCCGGTTGCGGTGACAGCGGTATCGGAGACGCCGGCAGCG
GCAGCGGCGGCAATGACGACGGCTTCTCCCGCTCTGTCCGGCTTTCCTGG
TGCTCCCGCTCTGCCCGGCTTTCCTGGTGCTAGTGGTGGAGTTGTCGGGG
CAGTACCGAGTGCAGGTTCGGGGGACGGTGGTGGCGGGGGTGGATATTCG
CCTGGTTGGATCAACATCACTAGCATATAGACCTTTTCACCCATGATGCG
TGGAACCAGGTGAACGTTCGCATTATTTTTTTTTTTTGCGAAGAAGTTGG
ATGCGGCCGCAGTTGTTTGTCCTTTTCTTGCAGCGTTTTTTTTTTACTCT
CGGGGGCCTGCAGCAAGCAAGTGTCGTGATTGCTGTAGCTCTTTCTCTAC
TTTCATTTTTTTGTTGTGCTGTGTGCTTAGCGGAAGGTGTTGTTCTGTAC
GGGCAGCACCTCACCGCCACACACCCTTCGTCACAGCAACGCTCGACCTC
TCTTTGTGTTTTTTTTTTGCGAGCGGCCAACGTATGGTGGGGAGCAGGTA
GCACCAGCTGAAAGTGGGGGGCGGTAGGGGTGGGCATAGATTCAACCCGT
GGATTCAACCCGTGGGTAATTATGGGTGGCAGCAGCAGCCGCCCTTGATT
CTGTTACTTGTTTTTCCTGAGTCTGTCTGCAACCAAGAGTGGTGAGTGCT
GCAAGCTGCCCTTTTTTTGTAGGGGGAGGTTTGAGCGTTTCGAGGAGGGG
TGTTACGGAGTTCCGGATGCATGCGACTCCCCTCCCCCTCCCGATATCCT
CACTCCACCATTCTTTTTTTTTTTTGCCGATGATCGATACTTACTTCCAG
GGGTTGAGTGTTGCCCAGAAGCGGAGTCTGCACATCTCTTCCAGGAGCTG
CACAAATGAATCCGGACAACATCGTTTTTGTTTTTTTTCGATCCCAACGG
AAACGCTGGGCCAATTACAGCAGCTATGACACGTCACAACAACGTCTACA
CTAGCTGGTGTGTCTTGCCCGCGAATGGCGGGGGGGGAGACGTGGTGCTG
ATGGAGGCAGGGACCGATCACCGATGGGCAATTGTGCCATCCTACTTGGT
CTACACTTTTTCCCCTATCCTATCTATCGTATCGGTGTCGCCCATCGCAA
ACACCGGG
back to top

protein sequence of EsuBft1180_11a-0001

>EsuBft1180_11 ID=EsuBft1180_11|Name=EsuBft1180_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=597bp
MKEVVRQLQTVALCYTAMGVKRNAGEIDSKKREALLLKAYKDDVVPGFLK
WLSEEGDCTTPPWLTMEMMGRVAVHTCRHQWHRNAGAEEQGERETAATES
LYEEPKLYKDGKKIWARYLDAFRDIRKDANPVYDKTIGDQPGGTPPSGEQ
YADQLDELLQALWEYQCREKNKTVEVTAEEKEFLRARGPSAAKGKGTGSG
SSAVDVDLSSTDGEVVQGTEKEGGGADAGKDEEVAAGAGRAAGSEGIDGS
GDGGAGREGQPMEQEQPKTPGEEDDGGSEPESVVQYPERPPNWMPYYFLT
FCFFGRPSNSEDTDLAMKAGSGPSGDSRPRKKNKASLGSSSDGGSGSEGG
ASDPAANLGRAGVKQFVGAGEAQSRAQVKKAMAKDAAQQSAETIRREGLE
LAKQQAEISRSVAKAVAQVAADVQRGRELSEQEAGRKRKLEEEEACRKRK
AQAKDDLKGELDRLDPDDEDNTARRAQIKRDLAKLYRTPVSKFTADAATS
NPTSTPAVAPANASGLPATSSGVASPVAVTAVSETPAAAAAAMTTASPAL
SGFPGAPALPGFPGASGGVVGAVPSAGSGDGGGGGGYSPGWINITSI
back to top

mRNA from alignment at Scaffold_106:234836..239497-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1180_11a-0001 ID=EsuBft1180_11a-0001|Name=EsuBft1180_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4662bp|location=Sequence derived from alignment at Scaffold_106:234836..239497- (Ectocarpus subulatus male Bft15b)
TGCTGCCTGCAAAAACGTTTCTTATAACGAATCGGTTTTTCTTTTGGAGT TGGTGCCTCTTTGCGGCGGCGTTCGTATTTTCAAACGCGTGCACTGCTGT TGTGCCGCACGGGCGCGGGAATTTGAACACACGCGGGCGGAACAGACGTA GCTCTCAGACTCCCAGCACGCCGGTGTACAGACCTCCCACGCCATGCCGG CTACGTAATCTCTGCTGCTAGACAAGATCCCCCTGTTGACGGTGGCTTTG GAGTTGTTTAGTTCCGGAATCGGCGATGGATTGACGATGAAGGAAGTTGT CAGGCAGCTGCAGACGGTCGCTCTCTGCTATACCGCGATGGGAGTCAAGA GGAACGCAGGAGAGATAGACAGCAAGAAGAGAGAGGCGCTGCTACTCAAG GCATACAAGGACGACGTCGTGCCTGGCTTTCTGAAATGGTTGTCGGAGGA GGGTGATTGTACAACCCCGCCCTGGCTGACGATGGAGATGATGGGCCGGG TTGCTGTACATACATGTAGGCACCAATGGCACAGGAACGCCGGTGCGGAA GAGCAAGGGGAAAGAGAAACAGCAGCAACCGAAAGGTAAGCATCAAGGTA CCAAGGGCGCAGGTTTCAACTGCAGAGTGCTAATCGTAGAGAACTTTACC CTGAGTGTAACGCGCGACATTCGCGAGATCATACCGTCGTTAGCTGTACG ACCTTCATCTGCCGCCATTTAACTGTAGGTTTACGTCACGAACGCCCCAC CATCTGTTGCCACTTTGTTACAAGGAACCAACACCGTGAACCCAACAGCC GTCCATGCCGCTGATGTACTCTTGCAGTCTACTGTGTGCTGAGTGAACTG TCCTGTTAGGGTAGATTGAGCCCGAGGTTGCTCGTTCGCATCGGCGATTG TTCGTACATCCTCCGCGTGGTGCAAGGTAAAAGTACAAGGGTCCAGCAGT GTAGTCTATGTTGATCATTCAGCTGGGCAACGATTTGCTGAGTTGCCCGA GGTACAACATGTGACACTCAGCCATACGAGCAGTAGGATTCCTGTCTCAG CATTGCTGTTCGCACCGTTGCCCCACGCATTTGCCAGATGAAGAACCAAA GCTGTACAAGGACGGGAAGAAGATCTGGGCAAGGTACCTGGATGCCTTCC GCGACATCAGGAAGGACGCCAACCCCGTGTACGACAAGTAAGTTGCTCGG GTCTGTTTTGAACAATATTTGTGTGTGCACATACTATCGGTAGTTGAAGG TGTGTGTTTCATTATTTTCACCGCGATTGTGTGTAGATATGTACACTGCT ACTCTTCCGCCGGCGTGAACACAGCAGAGCTCAGGCGCGCGGCAGACTAT CTGCGTCGAACGATCCAGTTTTGTTGTATGCACATGACGTGGGGAAAAAT AAGCGGGTGGTACCGCTGACAAACGCGGAAGCGACGGTGGTGGTATGCTA CAGAAGAAGTGATGCGCTGACGCAAGTGACTGACCAGGAGTTGTTTTTTT TCTCGCACTCGTGTGCCTCACCGTTGGGCACTTTGATTCTCCCGCATACC CCTGAGCGAAAACTCCAACATACGCGTGCGCTGGGTTTTCGATGTGCCTG ATATGTAAGCGCGACAAGGCGGCGATAGATACGCTGGTGGACGGGGTAGC AGGAGGAGGGCGGATGATCAAGGCGACAATCTGTGAACATCCGTAGTTTA GAGTAGCCTGTCGGGAAATTGTTGTGTTTTTCAAAGAGCTCCCACCCGTG GCGTAAAACAGAAACAACTCATCTCGACATAGATTTGGTTCGCCCCCCGC ATGATCACTCCGTCCCCAACAGTACCTCGGGCCTGCGCTTTGCCCCGCAC TTTTGCTGTTCTACGACGATCTGAACCATATAGCTGCGGCTCAATTGACG ACTGATTTCGTTCGGTCTCTTCGTGTCTGGTCATGGGAAGAACCCTCCAA ACATGCTTGAAGTTTCTCCTTCTCCCCGAATAATGTAGCTCAAGGGCAAC AAAAATGGCTCAGGATTGTTTGACTCAAGGGATCATGTCTTCAGCTGTGC CCATGCTGTCGTAGATGCTACCCCTTCTGCCCCACACGTATCGTACAACA ACTGCCCTTTTGTGCCGTCAGATCGACTCCATCCTTTTTGATGAACCCCC TCCCAAGGCCAACTCGAAGCAGAGTATTAAATGTATCAATGGCGTGCTGC CTTGGCGTGGATGCGCGGATCTCTATCTTACAGATGGTGGGGTAAGAAGT TGGCGACCATGATCATTCTTTTTATGTCCGGTGTCGTGTTCTGAAGTTCG TCCATGGGTTCCCGTCGGTTCGCTGATTTTCTTTCTTCGCCCAGAACCAT CGGGGACCAACCGGGCGGGACCCCTCCATCTGGAGAGCAGTATGCCGACC AGCTTGACGAGTTACTGCAGGCGTTGTGGGAATACCAATGCAGAGAAAAA AATAAAACCGTGGAAGTGACCGCGGAGGAGAAGGAATTCTTGCGCGCACG TGGCCCCTCGGCGGCGAAGGGCAAGGGTACGGGAAGCGGTTCCTCGGCCG TCGACGTAGACCTCTCTTCCACGGACGGGGAGGTCGTACAAGGTACGGAG AAGGAGGGAGGGGGTGCGGACGCGGGGAAGGATGAGGAGGTGGCGGCGGG GGCGGGGAGGGCGGCGGGTTCTGAGGGAATCGACGGTTCTGGCGACGGTG GCGCGGGACGGGAAGGGCAGCCCATGGAACAGGAGCAGCCGAAAACCCCA GGAGAAGAAGACGACGGCGGCTCTGAACCGGAGTCAGTCGTCCAATATCC CGAGAGGCCTCCCAATTGGATGCCCTACTATTTTCTCACCTTTTGCTTCT TTGGTAGGCCCAGCAACAGCGAGGACACGGACCTTGCAATGAAAGCTGGA TCTGGCCCCTCTGGAGATTCTCGTCCGCGGAAGAAAAATAAAGCTTCTTT GGGCTCGTCCAGCGACGGGGGGAGTGGGAGCGAGGGGGGTGCATCGGACC CCGCCGCGAACTTGGGCAGGGCCGGCGTTAAGCAGTTCGTCGGTGCCGGG GAGGCGCAGAGTCGGGCCCAGGTTAAAAAGGCAATGGCAAAGGACGCAGC CCAACAGTCGGCGGAGACCATACGAAGGGAGGGACTGGAGTTGGCAAAGC AGCAGGCCGAGATATCGAGGTCGGTGGCTAAAGCAGTGGCGCAGGTGGCT GCCGATGTGCAAAGAGGCAGGGAGCTGAGCGAACAGGAGGCTGGCCGCAA GCGCAAGCTGGAAGAAGAGGAAGCATGCCGGAAGCGCAAGGCTCAAGCGA AGGACGATCTGAAAGGCGAACTGGACCGTCTCGATCCAGACGACGAGGAC AACACCGCACGGCGCGCGCAAATCAAGCGGGATCTTGCTAAGCTGTACAG AACCCCTGTCAGCAAATTTACTGCTGATGCTGCCACCTCCAACCCAACGA GCACGCCGGCCGTGGCGCCGGCCAATGCGTCAGGCTTGCCGGCGACGTCG TCGGGTGTGGCATCTCCGGTTGCGGTGACAGCGGTATCGGAGACGCCGGC AGCGGCAGCGGCGGCAATGACGACGGCTTCTCCCGCTCTGTCCGGCTTTC CTGGTGCTCCCGCTCTGCCCGGCTTTCCTGGTGCTAGTGGTGGAGTTGTC GGGGCAGTACCGAGTGCAGGTTCGGGGGACGGTGGTGGCGGGGGTGGATA TTCGCCTGGTTGGATCAACATCACTAGCATATAGACCTTTTCACCCATGA TGCGTGGAACCAGGTGAACGTTCGCATTATTTTTTTTTTTTGCGAAGAAG TTGGATGCGGCCGCAGTTGTTTGTCCTTTTCTTGCAGCGTTTTTTTTTTA CTCTCGGGGGCCTGCAGCAAGCAAGTGTCGTGATTGCTGTAGCTCTTTCT CTACTTTCATTTTTTTGTTGTGCTGTGTGCTTAGCGGAAGGTGTTGTTCT GTACGGGCAGCACCTCACCGCCACACACCCTTCGTCACAGCAACGCTCGA CCTCTCTTTGTGTTTTTTTTTTGCGAGCGGCCAACGTATGGTGGGGAGCA GGTAGCACCAGCTGAAAGTGGGGGGCGGTAGGGGTGGGCATAGATTCAAC CCGTGGATTCAACCCGTGGGTAATTATGGGTGGCAGCAGCAGCCGCCCTT GATTCTGTTACTTGTTTTTCCTGAGTCTGTCTGCAACCAAGAGTGGTGAG TGCTGCAAGCTGCCCTTTTTTTGTAGGGGGAGGTTTGAGCGTTTCGAGGA GGGGTGTTACGGAGTTCCGGATGCATGCGACTCCCCTCCCCCTCCCGATA TCCTCACTCCACCATTCTTTTTTTTTTTTGCCGATGATCGATACTTACTT CCAGGGGTTGAGTGTTGCCCAGAAGCGGAGTCTGCACATCTCTTCCAGGA GCTGCACAAATGAATCCGGACAACATCGTTTTTGTTTTTTTTCGATCCCA ACGGAAACGCTGGGCCAATTACAGCAGCTATGACACGTCACAACAACGTC TACACTAGCTGGTGTGTCTTGCCCGCGAATGGCGGGGGGGGAGACGTGGT GCTGATGGAGGCAGGGACCGATCACCGATGGGCAATTGTGCCATCCTACT TGGTCTACACTTTTTCCCCTATCCTATCTATCGTATCGGTGTCGCCCATC GCAAACACCGGG
back to top

Coding sequence (CDS) from alignment at Scaffold_106:234836..239497-

>EsuBft1180_11a-0001 ID=EsuBft1180_11a-0001|Name=EsuBft1180_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1794bp|location=Sequence derived from alignment at Scaffold_106:234836..239497- (Ectocarpus subulatus male Bft15b)
ATGAAGGAAGTTGTCAGGCAGCTGCAGACGGTCGCTCTCTGCTATACCGC
GATGGGAGTCAAGAGGAACGCAGGAGAGATAGACAGCAAGAAGAGAGAGG
CGCTGCTACTCAAGGCATACAAGGACGACGTCGTGCCTGGCTTTCTGAAA
TGGTTGTCGGAGGAGGGTGATTGTACAACCCCGCCCTGGCTGACGATGGA
GATGATGGGCCGGGTTGCTGTACATACATGTAGGCACCAATGGCACAGGA
ACGCCGGTGCGGAAGAGCAAGGGGAAAGAGAAACAGCAGCAACCGAAAGT
CTATATGAAGAACCAAAGCTGTACAAGGACGGGAAGAAGATCTGGGCAAG
GTACCTGGATGCCTTCCGCGACATCAGGAAGGACGCCAACCCCGTGTACG
ACAAAACCATCGGGGACCAACCGGGCGGGACCCCTCCATCTGGAGAGCAG
TATGCCGACCAGCTTGACGAGTTACTGCAGGCGTTGTGGGAATACCAATG
CAGAGAAAAAAATAAAACCGTGGAAGTGACCGCGGAGGAGAAGGAATTCT
TGCGCGCACGTGGCCCCTCGGCGGCGAAGGGCAAGGGTACGGGAAGCGGT
TCCTCGGCCGTCGACGTAGACCTCTCTTCCACGGACGGGGAGGTCGTACA
AGGTACGGAGAAGGAGGGAGGGGGTGCGGACGCGGGGAAGGATGAGGAGG
TGGCGGCGGGGGCGGGGAGGGCGGCGGGTTCTGAGGGAATCGACGGTTCT
GGCGACGGTGGCGCGGGACGGGAAGGGCAGCCCATGGAACAGGAGCAGCC
GAAAACCCCAGGAGAAGAAGACGACGGCGGCTCTGAACCGGAGTCAGTCG
TCCAATATCCCGAGAGGCCTCCCAATTGGATGCCCTACTATTTTCTCACC
TTTTGCTTCTTTGGTAGGCCCAGCAACAGCGAGGACACGGACCTTGCAAT
GAAAGCTGGATCTGGCCCCTCTGGAGATTCTCGTCCGCGGAAGAAAAATA
AAGCTTCTTTGGGCTCGTCCAGCGACGGGGGGAGTGGGAGCGAGGGGGGT
GCATCGGACCCCGCCGCGAACTTGGGCAGGGCCGGCGTTAAGCAGTTCGT
CGGTGCCGGGGAGGCGCAGAGTCGGGCCCAGGTTAAAAAGGCAATGGCAA
AGGACGCAGCCCAACAGTCGGCGGAGACCATACGAAGGGAGGGACTGGAG
TTGGCAAAGCAGCAGGCCGAGATATCGAGGTCGGTGGCTAAAGCAGTGGC
GCAGGTGGCTGCCGATGTGCAAAGAGGCAGGGAGCTGAGCGAACAGGAGG
CTGGCCGCAAGCGCAAGCTGGAAGAAGAGGAAGCATGCCGGAAGCGCAAG
GCTCAAGCGAAGGACGATCTGAAAGGCGAACTGGACCGTCTCGATCCAGA
CGACGAGGACAACACCGCACGGCGCGCGCAAATCAAGCGGGATCTTGCTA
AGCTGTACAGAACCCCTGTCAGCAAATTTACTGCTGATGCTGCCACCTCC
AACCCAACGAGCACGCCGGCCGTGGCGCCGGCCAATGCGTCAGGCTTGCC
GGCGACGTCGTCGGGTGTGGCATCTCCGGTTGCGGTGACAGCGGTATCGG
AGACGCCGGCAGCGGCAGCGGCGGCAATGACGACGGCTTCTCCCGCTCTG
TCCGGCTTTCCTGGTGCTCCCGCTCTGCCCGGCTTTCCTGGTGCTAGTGG
TGGAGTTGTCGGGGCAGTACCGAGTGCAGGTTCGGGGGACGGTGGTGGCG
GGGGTGGATATTCGCCTGGTTGGATCAACATCACTAGCATATAG
back to top