Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FGX3 |
| ProteomeId | EsuBft1009_3 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | TMhelix |
| Protein domains | TRANSMEMBRANE |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 54 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.73e-06 |
| EggNOG OGs | COG0508@1|root,KOG0557@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | dihydrolipoyllysine-residue acetyltransferase activity |
| COG category | C |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1009_3a-0001 ID=EsuBft1009_3a-0001|Name=EsuBft1009_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=542bp|location=Sequence derived from alignment at Scaffold_106:153534..154176- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGCAGCTGGTACCACGGCAGGCGGCGCCCTCCAGCGGTGAGATGAA
TGCATGGGTGCGGGTCAAGATCTTGTCCCGTATCAACAATACTTTGTCTT
CCCTCGAAGAGATTGAGTCGATTGTGCTGGTTGGTGACGTGGTCTGCGAA
ATCGAGCTGGAGCATTTCTCCGTGGGGGTGAAAGTCGAGACCACGGGCTT
CCTCGCTGAGATACGTGAGTGGTTATGCGCAGCTGGCGCTGTTATGCTTT
TTTACTATGTGTCGTTTTCATGTCAAAACACTTCGATTGCCCCAGTCAAC
CGAAGCACCTTCTTAGCCCCAGGTTCCAGGATGACCGGTTCTCCCACTCG
TTCATTCCTGCACACATCGTGGCTTTCCGTAGTCTTCGCTCTTCTGCGCA
GCTGTGCTGCGTGCATCACGTTTTTGTTTTGGGCTAGTGTCGCTGCCCCT
TTGTATGTACGTCGTACAGCAGTAGTTTGAGACTCGATTATCCGGCAAGT
GTTTTCCGTTGTCCTTGTTTGCAGTGGTCGAAGCCGGCACCG back to topprotein sequence of EsuBft1009_3a-0001 >EsuBft1009_3 ID=EsuBft1009_3|Name=EsuBft1009_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=159bp
MKQLVPRQAAPSSGEMNAWVRVKILSRINNTLSSLEEIESIVLVGDVVCE
IELEHFSVGVKVETTGFLAEIREWLCAAGAVMLFYYVSFSCQNTSIAPVN
RSTFLAPGSRMTGSPTRSFLHTSWLSVVFALLRSCAACITFLFWASVAAP
LYVRRTAVV back to topmRNA from alignment at Scaffold_106:153534..154176- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1009_3a-0001 ID=EsuBft1009_3a-0001|Name=EsuBft1009_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=643bp|location=Sequence derived from alignment at Scaffold_106:153534..154176- (Ectocarpus subulatus male Bft15b)
ATGAAGCAGCTGGTACCACGGCAGGCGGCGCCCTCCAGCGGTGAGATGAA
TGCATGGGTGCGGGTCAAGATCTTGTCCCGTATCAACAATACTTTGTCTT
CCCTCGAAGAGATTGAGTCGATTGTGCTGGTACTTCGCAAGTTCAATATT
CCCCCGAATCAGCTTCCGCAACAGCAGTCTGACTTCGCCGCACGTGGTGG
TTGACCCTCCGTGTACACCCGTGTGCACAGGTTGGTGACGTGGTCTGCGA
AATCGAGCTGGAGCATTTCTCCGTGGGGGTGAAAGTCGAGACCACGGGCT
TCCTCGCTGAGATACGTGAGTGGTTATGCGCAGCTGGCGCTGTTATGCTT
TTTTACTATGTGTCGTTTTCATGTCAAAACACTTCGATTGCCCCAGTCAA
CCGAAGCACCTTCTTAGCCCCAGGTTCCAGGATGACCGGTTCTCCCACTC
GTTCATTCCTGCACACATCGTGGCTTTCCGTAGTCTTCGCTCTTCTGCGC
AGCTGTGCTGCGTGCATCACGTTTTTGTTTTGGGCTAGTGTCGCTGCCCC
TTTGTATGTACGTCGTACAGCAGTAGTTTGAGACTCGATTATCCGGCAAG
TGTTTTCCGTTGTCCTTGTTTGCAGTGGTCGAAGCCGGCACCG back to topCoding sequence (CDS) from alignment at Scaffold_106:153534..154176- >EsuBft1009_3a-0001 ID=EsuBft1009_3a-0001|Name=EsuBft1009_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=480bp|location=Sequence derived from alignment at Scaffold_106:153534..154176- (Ectocarpus subulatus male Bft15b)
ATGAAGCAGCTGGTACCACGGCAGGCGGCGCCCTCCAGCGGTGAGATGAA
TGCATGGGTGCGGGTCAAGATCTTGTCCCGTATCAACAATACTTTGTCTT
CCCTCGAAGAGATTGAGTCGATTGTGCTGGTTGGTGACGTGGTCTGCGAA
ATCGAGCTGGAGCATTTCTCCGTGGGGGTGAAAGTCGAGACCACGGGCTT
CCTCGCTGAGATACGTGAGTGGTTATGCGCAGCTGGCGCTGTTATGCTTT
TTTACTATGTGTCGTTTTCATGTCAAAACACTTCGATTGCCCCAGTCAAC
CGAAGCACCTTCTTAGCCCCAGGTTCCAGGATGACCGGTTCTCCCACTCG
TTCATTCCTGCACACATCGTGGCTTTCCGTAGTCTTCGCTCTTCTGCGCA
GCTGTGCTGCGTGCATCACGTTTTTGTTTTGGGCTAGTGTCGCTGCCCCT
TTGTATGTACGTCGTACAGCAGTAGTTTGA back to top
|