Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1009_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 138 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1009_8a-0001 ID=EsuBft1009_8a-0001|Name=EsuBft1009_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1387bp|location=Sequence derived from alignment at Scaffold_106:123361..128202+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCCCCTGTGGGTGCGTGGTCTTGTGTGTGCAGTGTGAAGAGGAAGTGGCC
GTTGGAAAATAGCAGATAGCAGAGGGTTGCTTCGGCCACGGAGCCCCCTA
TCCACATACCCCGTACGCCTCAGCCGTGTGCCCCCCCAGGTAAACATGAC
AACTGCGGATAGTGCTCTAAAGCTGGACCCCAGCTTTACTAGCATGCACA
TCAGGATTTCTTATGCACGGGCAGGGTTCAGGGAAGAAAGCCAACAATTC
GATGGCATCAACTGCCGGGCCTAAGAACTTGTGCTTGACCATGCACCAAC
CCTGGGCGTCGCTACTGGTTGCCGGTATAAAGCGCGTCGAGGGACGAAGC
TGGTCAACCGAGCACAGAGGAATCCTGTGGGTTCATGCAGCAGCGAAGGA
GCCAAACCCTGCGGAGGTTCGCGCGGTGGAGGACCAATATCGGTCAATTT
ATGCTGCTGACGGTAACTCAGACAAGCTGTGTCTACCGACATCATATCCA
ACTTCTTGTCTCCTCGGTTGCGTGGACATCGTGGGCTGCCTGCCTCAGGC
GGAATTCCAAGCAGCAGAGGACATCCCCCTGGGTCCAAAGCTTGAGAGTC
AGTCAGAATTCGTTTTTCTCTGTCAAGATCCAAGGCAGCTTGTTCTACCA
TTCAGCTTATCAGGACAACACAAATTGTGGAGGCTGGACAAGCCCACCAG
GGAGGCGGCCGAAGCGGGGTTGGGACCTATTGTTCACGGACCGTCTCCAG
CCGTCTTCCGTTCTTGCTAGAAGATGATTGAAGCGCAGTGGAGTACCCGA
ATACATCGATCTCGATTGCTTGGTTCCATCGAGTAGCTTGCGTCTTGGTC
GACGGTCCCGAACATTCCGGATCATTTGCCAGCGCTGCAACGCGAGGAAG
GCGCCCCTTTTTCGTTCTTTGAGGGTGGCTTGAGCTGTTGTTGCTGCGAT
TCTTACTCCGAGAGTTGCGGCTGTGTTTCTCCTGCTACTATATTTGCTGC
CTTCGCAAAAACCTTCGCCTTGGAATTTCGATTATAAGTAGGTTTGGTCT
GATCCCTGGACGGGAGTCAACTTCCTTCTCGTGGGTCTCGTAGCTCAGAC
ACTATACTGTCTGCCTAGTAGTAGTTGGGGCCCTCCGTGTTGCCTGACCG
CCCACATCTTGGATTTTTGGCGTGAAGGGCTGTCTGCCTGGTTCACGATG
AACCCGACAGAGAGGACGGGCGTTTTGAAAGGTGTGAAAGGTGAAGTGTA
CTGCAGGATGTGCGCGGTTGAATCATAGAGCCCAGGCCAAACCTCCAGGA
CGTTACACGAAAGGTGTGAAAGGTGAAGTGTACTACAGGATGTGCGCGGT
TGAATCATAGAGCCCAGGCCAAACCTCCAGGACGTTA back to topprotein sequence of EsuBft1009_8a-0001 >EsuBft1009_8 ID=EsuBft1009_8|Name=EsuBft1009_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=42bp
MTTADSALKLDPSFTSMHIRISYARAGFREESQQFDGINCRA back to topmRNA from alignment at Scaffold_106:123361..128202+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1009_8a-0001 ID=EsuBft1009_8a-0001|Name=EsuBft1009_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4842bp|location=Sequence derived from alignment at Scaffold_106:123361..128202+ (Ectocarpus subulatus male Bft15b)
CCCCCTGTGGGTGCGTGGTCTTGTGTGTGCAGTGTGAAGAGGAAGTGGCC
GTTGGAAAATAGCAGATAGCAGAGGGTTGCTTCGGCCACGGAGCCCCCTA
TCCACATACCCCGTACGCCTCAGCCGTGTGCCCCCCCAGGTAAACATGAC
AACTGCGGATAGTGCTCTAAAGCTGGACCCCAGCTTTACTAGCATGCACA
TCAGGATTTCTTATGCACGGGCAGGTGAATTGGTACAGTGTCAGATTGGT
AGCTTGGCTAGCAATCCGGAGGCCAGTTGTGTATTTTGAACCTGAAATAG
AATACAGAGGATATTTTTTGAACCTATATCCGCATGAACAAGTAGATCAC
AGCCCAAGCAAGTGCTGTTTGTTCTCTTTGCTTTGAAATACATTTGGAAT
GTTCACCACCGCCAGATGAACACTACTACACTGGTGTTTGTATTGTTGAA
GTGATTTCTTGTGGGATACGTCCGGCTGGTATTTCTGCCACGGCCTCCAT
CATCATCAGTGCGGAACATATCTCTCTACATATCCGTTCAGCCATCTCTG
TCCTGCCCTTCTCTTCAGCTGTACTCGTGCCTCCGATCATTCGAAGTTTC
CCCCCCCGCCCCCATGTTCCATTCCCCCCCTGATCAGCTGTCCTTTTTGA
TGCAAAGAAATCACACCACACAACACAGTCAACGGATGGATATCGACACG
TTCCTATCGTAATACGTCACGTATTGGTGGCCGTACTAAGTGTCAAAGCA
GCGTTGCCATGGAAATTCTTAAATTGTGAATCCCTTCAGACCTACTTCTA
CGTCTGCATATGCATAGTACCTCATATTCTGCAAGGCGCCAAACTAAAGC
CCTTGCGGAATCAAGACATAAAGAGGAAGACATGACAAACACTTTTCAAG
CATTGAATGCCTGCGCTAATATGACAAACGGACTGCATTATTAGTACCCA
TACTTCAAACATCACGCGTAGCCTGCCATATTCCCACCAGAGAGCCGGTT
CGATGACGCCAATATGATGACCATGCTGCTGGAGTGCTGGGTGTCTAAGG
TCCTTGTACTCCGTTTTGGAAGAACATGCCATCGTATATCGTAGCAAGCA
GCAGATCCACAAACTCTCACTCGATACGTATTTCCCTGAACGATACGTTG
TGAAGACACTTTTTGTCAATGCCACCTACAGCAGCACAGTGCCGGCCCGC
ACTTAAGAACCTACTATATTGGGCGAGGCTCAGTTCTTATTGGCTGCCCC
GACCCGAGCACCAGTTCTTATTTGCCAAGTTCTTATTTCGTCGTCCATTC
TTCTCCAGAACGGGGCGTTCTTGTTCTTACAGTATTTTAACATAATTTGC
TATATTGTCGGCTGTCAACCATGAGCAACACTAGTACTGCTGTCGATACA
AGAAAATACCAAGGCATGGAGCAGCAACTGTCAACCTTCTTGGTCCACAA
GGGTGACGTTGGTCCTGCGTGCCCTTCCCGATCTACTAATGCTCTCAAGC
AAAACCCAGGAACCTACAGCCGTATCCGAAGCTCCGCTGTACTTGTCTAA
GGGCAACTTCATCTTGCGCGTACTCTGGTCTAGCTCCAGCTGCACACAGT
AGTCGTACAGGTGGCGAGTGTCCTTCTGAGATTGTTGAGTGATCAGCCCT
CCAAACCACCCCATGCCCAGCCTAACGAGCACTCCACGCCGCAAAAGCAA
TCTGTCAAGAGCAACGGGTTAAGCTTCTTGAATACGAAAGCCTGCCGGGA
TCTCCATTCCCTGTATCTCATCCTCCGGGTCTTGTGGGTCCATGCTGTCG
TCGTCGTCCTTAAGAGCTAGCTCGTCGGTCTGGGGTTGAGAGATGTCTGC
TAACGAGGCAACGGGAGACACAAGAAGTTAGGGTGTCACGTCGCCAAACC
CAACCTGAACTTATCATAATTTGAGTGCAGCCGTGCGCGGAAACAAGCTA
ACGTCAACATGAAGGACATCGTCATCAACAAAAAGAAGGTGAAGAGTTGG
TTTTGTGCAAAACAAACTTACCGCCGTCGTCTTCATCGCTGGAGTCAACG
CCCTCCATGAGCGTCTCACGTCCTCCATCGCCCTCCTCCGCCCGCCCCTC
AGGCTCATCGTTGCCGTTCTCCGAACCTTGTTCGCCGTCGCTACTGTCTT
CATCGTAAGCGAAGGTATACGGCTTGTCCAAACCCTCCAAGGTGATTCGA
TCATCGCCCGAGCCGTCCACGGTCATGACCATCCCGCACTTCTTGAAAAG
ACGGTATCGTTACGCCTGTTGGCTGTTGAGTCTTGCCATGGCCGCTCCCA
TCCACTGAGTGATCAGGACGCGCCGATCAGAAGCTGTCAGCGACGCGGTT
TCCCACCTCTCGAGGTTGTCCGACTGCTCGAGCCATATGTCCATCTGCCT
CCCGACTTCCACCTTGAGAAATCGTCCGGCTTCTGCATGAACTGGCTGCA
CCTCGTCCGTGCACTCCGAAGGGCCATACCAGGCGAGAGTGTTGCAGTGC
TTCGCAAGATACTCCTTGAACTCGTCCGTGGTCTGCGCGTGCAAGTTGTC
CATGATAAAAATAGACCTCGCCTTGGGGAGCTCACCCCGCCCGCGCATCA
CGCTTTCTCGGGGGCACCCAGGGGCACGACGCGTGCGTTCAATGCCCACC
CTCCCCCTCTATAAAAATACAAAGGTTGATATGTGGGGTATGTTCCCAAA
TCCAATACTCTGTACTCTGGGATCACTCCCCCCTCCTCCCTCCCTCCCCC
TGCGAGTATTATTATCTGGCAGCCGCTGCATTGCTGTCGTTCTTATTTGT
AGCAGCAGTTTTGCACCTCAGGTGTGTGTTCTTGTTCCTAACAGGGCGTG
CGGCTGAGCACGTGTTCTTATTGGTAAATCCTTAAGTTTTGTATTTTTTG
AGCATCAAATTCCTAAGTGCCATATTCTTAAGTGCGGGCCGGCACTGTAG
ACGTTTATTTGATACCCTTTACTACAATTGAATCTCCGTGTCTCCTTATC
GTTTTCACAGGGTTCAGGGAAGAAAGCCAACAATTCGATGGCATCAACTG
CCGGGCCTAAGAACTTGTGCTTGACCATGCACCAACCCTGGGCGTCGCTA
CTGGTTGCCGGTATAAAGCGCGTCGAGGGACGAAGCTGGTCAACCGAGCA
CAGAGGAATCCTGTGGGTTCATGCAGCAGCGAAGGAGCCAAACCCTGCGG
AGGTGAGCATGGTAAAAGGCGTGCAGGCCCGCCAAAGAACGGATACATGC
GGAATGCTTGTTGACGAACTAACAATACGGGGTCAACACTCTCGAAATGG
CTCTCCCTGCTGGCGCTTGGTGTGCCTATTTCATCTGAATTGTATTCGTT
TGCACACCCTACTCTACATGTACGGTGTACGCGGAATATTTGAACTCGGA
ATCTACAATACTGTGATTCTTTCCCCCAAACGTTATTGATTATAATAAAA
AAGTGTAGGTTCGCGCGGTGGAGGACCAATATCGGTCAATTTATGCTGCT
GACGGTAACTCAGACAAGCTGTGTCTACCGACATCATATCCAACTTCTTG
TCTCCTCGGTTGCGTGGACATCGTGGGCTGCCTGCCTCAGGTATGTATGT
GTGTTTATTTGTGCCCATATTTTTACGTTCCACGTAAGGGCGCGCTCTCC
GAGGGATCTCTTATGCCTCTCGGGTGCGGTGAGTTCTTCGAAGGAAGCCA
GTCGTTTCGTTTGCATACACCTACCTGTTTTGACTCATACATTGCCGGTT
TTGTGTGTCGGTGGCCCGTGCATGGCAGGCGGAATTCCAAGCAGCAGAGG
ACATCCCCCTGGGTCCAAAGCTTGAGAGTCAGTCAGAATTCGTTTTTCTC
TGTCAAGGTAAGGTGCGTGTTTTGCTCGACAACGTTACATCGCAACCAAT
ACTACTGGTGTCGGCGCTCCCTAGCAATGCTGCTCTTGCTGAGAATAGAG
GTTGTGGCTGCAGGTAAACGTTGGCGTACACCTTGATGCACAAGACAGGA
TATCTAGATATCACCGCAGCAAGGCAGCCTGACATGATGTGCTCTCCTGC
TGTGGTCCCTCGCGTACCCCTGTGCCTCTCAGATCCAAGGCAGCTTGTTC
TACCATTCAGCTTATCAGGACAACACAAATTGTGGAGGCTGGACAAGCCC
ACCAGGGAGGCGGCCGAAGCGGGGTTGGGACCTATTGTTCACGGACCGTC
TCCAGCCGTCTTCCGTTCTTGCTAGAAGATGATTGAAGCGCAGTGGAGTA
CCCGAATACATCGATCTCGATTGCTTGGTTCCATCGAGTAGCTTGCGTCT
TGGTCGACGGTCCCGAACATTCCGGATCATTTGCCAGCGCTGCAACGCGA
GGAAGGCGCCCCTTTTTCGTTCTTTGAGGGTGGCTTGAGCTGTTGTTGCT
GCGATTCTTACTCCGAGAGTTGCGGCTGTGTTTCTCCTGCTACTATATTT
GCTGCCTTCGCAAAAACCTTCGCCTTGGAATTTCGATTATAAGTAGGTTT
GGTCTGATCCCTGGACGGGAGTCAACTTCCTTCTCGTGGGTCTCGTAGCT
CAGACACTATACTGTCTGCCTAGTAGTAGTTGGGGCCCTCCGTGTTGCCT
GACCGCCCACATCTTGGATTTTTGGCGTGAAGGGCTGTCTGCCTGGTTCA
CGATGAACCCGACAGAGAGGACGGGCGTTTTGAAAGGTGTGAAAGGTGAA
GTGTACTGCAGGATGTGCGCGGTTGAATCATAGAGCCCAGGCCAAACCTC
CAGGACGTTACACGAAAGGTGTGAAAGGTGAAGTGTACTACAGGATGTGC
GCGGTTGAATCATAGAGCCCAGGCCAAACCTCCAGGACGTTA back to topCoding sequence (CDS) from alignment at Scaffold_106:123361..128202+ >EsuBft1009_8a-0001 ID=EsuBft1009_8a-0001|Name=EsuBft1009_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=129bp|location=Sequence derived from alignment at Scaffold_106:123361..128202+ (Ectocarpus subulatus male Bft15b)
ATGACAACTGCGGATAGTGCTCTAAAGCTGGACCCCAGCTTTACTAGCAT
GCACATCAGGATTTCTTATGCACGGGCAGGGTTCAGGGAAGAAAGCCAAC
AATTCGATGGCATCAACTGCCGGGCCTAA back to top
|