Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft877_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 37 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft877_3a-0001 ID=EsuBft877_3a-0001|Name=EsuBft877_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=373bp|location=Sequence derived from alignment at Scaffold_103:158176..158893+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTTAGTGTGGAGAACACCTTCATAAAGGTTGAAACTCCTCAACGTCT
CTGGAGGACGAAACACTCTTTTCCACACTGGCGTCGACAAGATATGTCAG
ATGTCTACTTTTGGTTGCAAAAGACACGGGTTCAAAACCCGATGCTCACC
TAATTTTCTTCCGGAGTACGGAAAAAGAAAAACGGTGGGTGGGCCAAGAA
ACAATGTACTACTGTCTTCGAACTCGAAACTTCTGGCAATGCGTGGCGGA
AGTGGTGTACCCGCAAACACGCACAGAAGATTGTTGGAAAAAAGGTTCTA
CTCGCCGCCAGCCGGTCGGGTTCCGGTTACCCCAAAAAGACTTCCCTTGC
CTAGCAAACAAGAAGAAGCCTCG back to topprotein sequence of EsuBft877_3a-0001 >EsuBft877_3 ID=EsuBft877_3|Name=EsuBft877_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=50bp
MVSVENTFIKVETPQRLWRTKHSFPHWRRQDMSDVYFWLQKTRVQNPMLT back to topmRNA from alignment at Scaffold_103:158176..158893+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft877_3a-0001 ID=EsuBft877_3a-0001|Name=EsuBft877_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=718bp|location=Sequence derived from alignment at Scaffold_103:158176..158893+ (Ectocarpus subulatus male Bft15b)
ATGGTTAGTGTGGAGAACACCTTCATAAAGGTTGAAACTCCTCAACGTCT
CTGGAGGACGAAACACTCTTTTCCACACTGGCGTCGACAAGATATGTCAG
ATGTCTACTTTTGGTTGCAAAAGACACGGGTTCAAAACCCGATGCTCACC
TAATTTTCTTCCGGAGTACGGAAAAAGAAAAACGGTGGGTGGGCCAAGAA
ACAATGTACTACTGTCTTCGAACTCGAAACTTCTGGCAATGCGTGGCGGA
AGTGGTGTACCCGCAAACACGCACAGAAGATTGTTGGAAAAAAGGTGGCT
CTATTCGATATACTCGTAGCATAGCATGCGGGTGGTGTATTGCGTGTACA
TATGCGGGATTTGCAGTGACGAACTACGGAGGAACAAGAAGTTTCTTTAT
GTTTTCCTTGGGAGTGTGGTAGATTGGTGGATATTCATGGAGATTCGTTT
TGGGTGTTTGAGCGTTATGCGTGACTTGATGCCGTGATGGAATGACGAGC
TCAAGCACGCCCCCGATTAATACAACACGGATACAACACGTTTTCCAACA
CGTCTGTACGACTTTACCTACCCCTACGGCCCGTCATGGCCGAGCTGCTC
TACACTCCCATCACACACAACTGAGCCAACCGCGATCAGGTTCTACTCGC
CGCCAGCCGGTCGGGTTCCGGTTACCCCAAAAAGACTTCCCTTGCCTAGC
AAACAAGAAGAAGCCTCG back to topCoding sequence (CDS) from alignment at Scaffold_103:158176..158893+ >EsuBft877_3a-0001 ID=EsuBft877_3a-0001|Name=EsuBft877_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=153bp|location=Sequence derived from alignment at Scaffold_103:158176..158893+ (Ectocarpus subulatus male Bft15b)
ATGGTTAGTGTGGAGAACACCTTCATAAAGGTTGAAACTCCTCAACGTCT
CTGGAGGACGAAACACTCTTTTCCACACTGGCGTCGACAAGATATGTCAG
ATGTCTACTTTTGGTTGCAAAAGACACGGGTTCAAAACCCGATGCTCACC
TAA back to top
|