Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft4956_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 47 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft4956_2a-0001 ID=EsuBft4956_2a-0001|Name=EsuBft4956_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=477bp|location=Sequence derived from alignment at Scaffold_103:7799..8275+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTCCAACCACTAGGACATGTAAAACGCAAGAGTACGCCCCGCGCCCC
CCGCCCCCCCGCATCCAACATCACCCGTTCTGCGTCCCGCCAGGCGCTTG
TTGACGACGAATCCATCGTCTCGGACCTCGGCTTCACGCCCGGAGAAGGA
TCCCTCTTGGCCTACAGCTGCATCCAGTTTAACTTGTTCGTGGACGACGC
TGCCGAGATCATGAGGACGCAAGCCTTGCGCAACCCGGATTGTCAGGAAG
AGTGCACGCTCTGCGCCGACTCGACTGCCCCGTGCGCGACGTGCTTGGTG
GACCAGCCGGCCATCACCAAGTGCAAAGAACCTTCGACCAAGATCTTCTA
CGACGGCATCCACTTCACCACAGACTTCCACCTCACCTTCGGAGAGGCCA
TCAGGCAGTGCTCTAAGGACAGCCCCAACTTCGACCGCGCTTTCGTGGGA
GTTATTTGCCCGGAGGAGGAGCCTTGA back to topprotein sequence of EsuBft4956_2a-0001 >EsuBft4956_2 ID=EsuBft4956_2|Name=EsuBft4956_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=158bp
MVQPLGHVKRKSTPRAPRPPASNITRSASRQALVDDESIVSDLGFTPGEG
SLLAYSCIQFNLFVDDAAEIMRTQALRNPDCQEECTLCADSTAPCATCLV
DQPAITKCKEPSTKIFYDGIHFTTDFHLTFGEAIRQCSKDSPNFDRAFVG
VICPEEEP back to topmRNA from alignment at Scaffold_103:7799..8275+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft4956_2a-0001 ID=EsuBft4956_2a-0001|Name=EsuBft4956_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=477bp|location=Sequence derived from alignment at Scaffold_103:7799..8275+ (Ectocarpus subulatus male Bft15b)
ATGGTCCAACCACTAGGACATGTAAAACGCAAGAGTACGCCCCGCGCCCC
CCGCCCCCCCGCATCCAACATCACCCGTTCTGCGTCCCGCCAGGCGCTTG
TTGACGACGAATCCATCGTCTCGGACCTCGGCTTCACGCCCGGAGAAGGA
TCCCTCTTGGCCTACAGCTGCATCCAGTTTAACTTGTTCGTGGACGACGC
TGCCGAGATCATGAGGACGCAAGCCTTGCGCAACCCGGATTGTCAGGAAG
AGTGCACGCTCTGCGCCGACTCGACTGCCCCGTGCGCGACGTGCTTGGTG
GACCAGCCGGCCATCACCAAGTGCAAAGAACCTTCGACCAAGATCTTCTA
CGACGGCATCCACTTCACCACAGACTTCCACCTCACCTTCGGAGAGGCCA
TCAGGCAGTGCTCTAAGGACAGCCCCAACTTCGACCGCGCTTTCGTGGGA
GTTATTTGCCCGGAGGAGGAGCCTTGA back to topCoding sequence (CDS) from alignment at Scaffold_103:7799..8275+ >EsuBft4956_2a-0001 ID=EsuBft4956_2a-0001|Name=EsuBft4956_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=477bp|location=Sequence derived from alignment at Scaffold_103:7799..8275+ (Ectocarpus subulatus male Bft15b)
ATGGTCCAACCACTAGGACATGTAAAACGCAAGAGTACGCCCCGCGCCCC
CCGCCCCCCCGCATCCAACATCACCCGTTCTGCGTCCCGCCAGGCGCTTG
TTGACGACGAATCCATCGTCTCGGACCTCGGCTTCACGCCCGGAGAAGGA
TCCCTCTTGGCCTACAGCTGCATCCAGTTTAACTTGTTCGTGGACGACGC
TGCCGAGATCATGAGGACGCAAGCCTTGCGCAACCCGGATTGTCAGGAAG
AGTGCACGCTCTGCGCCGACTCGACTGCCCCGTGCGCGACGTGCTTGGTG
GACCAGCCGGCCATCACCAAGTGCAAAGAACCTTCGACCAAGATCTTCTA
CGACGGCATCCACTTCACCACAGACTTCCACCTCACCTTCGGAGAGGCCA
TCAGGCAGTGCTCTAAGGACAGCCCCAACTTCGACCGCGCTTTCGTGGGA
GTTATTTGCCCGGAGGAGGAGCCTTGA back to top
|