EsuBft890_8a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft890_8a-0001
Unique NameEsuBft890_8a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_178contigScaffold_178:144529..150764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LTM8
ProteomeIdEsuBft890_8
Protein domainsIPR018247
Protein domainsSSF47473
Protein domainsSIGNAL_PEPTIDE_N_REGION
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsTMhelix
Protein domainsIPR002048
Protein domainsIPR011992
Protein domainsSIGNAL_PEPTIDE_C_REGION
Protein domainsSIGNAL_PEPTIDE
Protein domainsSIGNAL_PEPTIDE_H_REGION
Protein domainsCoil
Protein domainsTRANSMEMBRANE
Protein domainsCYTOPLASMIC_DOMAIN
Ownerapollo_admin@sb-roscoff.fr
Noteprotein tic 20- chloroplastic os:arabidopsis thaliana gn:tic20-ii pe:2 sv:1 [Automatic annotation]
Nb exon7
Max annot lvl2759|Eukaryota
Length2873
Hectar predicted targeting categorychloroplast
Evalue3.26e-258
EggNOG OGs2BYWW@1|root,2QUSD@2759|Eukaryota
Ec32 ortholog descriptionTIC 20 related, plastid import
Ec32 orthologEc-28_003500.1
Date last modified2016-06-14
Date creation2016-06-14
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009526,GO:0009528,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009706,GO:0009941,GO:0016020,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042170,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
Descriptionprotein transport
COG categoryS
Cross References
External references for this mRNA
DatabaseAccession
GO0005509
GO0044434
GO0016168
GO0003333
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft890_8aEsuBft890_8aEctocarpus subulatus male Bft15bgeneScaffold_178 144529..150764 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft890_8a-0001EsuBft890_8Ectocarpus subulatus male Bft15bpolypeptideScaffold_178 146014..150681 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft890_8a-0001-exonEsuBft890_8a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_178 144529..146325 -
EsuBft890_8a-0001-exonagat-exon-20275Ectocarpus subulatus male Bft15bexonScaffold_178 147003..147110 -
EsuBft890_8a-0001-exonagat-exon-20271Ectocarpus subulatus male Bft15bexonScaffold_178 147593..147817 -
EsuBft890_8a-0001-exonagat-exon-20273Ectocarpus subulatus male Bft15bexonScaffold_178 148273..148395 -
EsuBft890_8a-0001-exonagat-exon-20274Ectocarpus subulatus male Bft15bexonScaffold_178 148851..149008 -
EsuBft890_8a-0001-exonagat-exon-20276Ectocarpus subulatus male Bft15bexonScaffold_178 149447..149531 -
EsuBft890_8a-0001-exonagat-exon-20272Ectocarpus subulatus male Bft15bexonScaffold_178 150388..150764 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft890_8a-0001-exonagat-three_prime_utr-22789Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_178 144529..146013 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft890_8a-0001-cdsEsuBft890_8a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_178 146014..146325 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft890_8a-0001-exonagat-five_prime_utr-14765Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_178 150682..150764 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft890_8a-0001 ID=EsuBft890_8a-0001|Name=EsuBft890_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2873bp|location=Sequence derived from alignment at Scaffold_178:144529..150764- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTTCCACACACGCGATATCAACCAACATCAACACATCAACAACGAC
GAAGACACGACACGTTTCCCGCTAAGACTAACCATGGTCCAGAGCTATGA
AGCGAATGTCCAATATTCTGCTGCTATGAAGCTGTCGCTCCTCTGCCTCG
GAGGTGCGGCTGCGTTCATGACGCCGCCTTCGCTGGTGACACATCCACAA
CACATGCGCAGCAGCGGTGCATCGCGTGGAGCAGCCGCAGCTGTTGCGCC
ACGCCGGTTCGTCTTGAGCATGGCGAATGACGAGGCGAGGGAGTCTGCCG
TAGCGTCAAGCGGCGCTGAAGAGGCTGCGGAAAAAGCAGCGAAGTTGAGG
GCATTTGCTGCGGAGCTCCGGTTGCAGGCGGAGGAGTTGGAGTCAAAGAG
GGACTCGGAGAAGCAGCAGGCGGCGAAGGAGGCGTTCGATTCTTTCGACA
CGAACGACGACGGGACGGTGGACGTGAAGGAGTTGATCGCAGGGTTGGAG
GGGCAGCTCAGGAAGGACTTCATCAAGCGCATGACCAAGACGATGAAGAG
GAAGCCTTCTCCGGCTGAGGTCGACGAACGGATTTCGGAAATGCCCGGTG
GAAGTCTGCTCCCGATGGAGCTGGCGCAAAAGCTGATCGAGAGTTACGAC
ACCAACGGAGACGGGGTCCTCCAGCCGTCAGAGTTTGCCTCCAAGGCGGA
CATGCGGGTCAGGCTAGACAGCCTTTTTGCCGACCGTGCACAGGCGGCTC
GGTTGGAAGCGGCCGCCGCAAGAGAGAGGGAAATCGAGAAGAGGGGGGCA
GACAAAGCGCGGCAGGAAGCCAAGGCCAGGGGGCTAGCCCTACCAGAGGA
CTTCAACGACGGCCCCCCCACCATCACAGACAAGCTCCTGTCGGTCCTAC
CGTACACTCTGCCTCTGATGGACAGCCTCGTATTCGGAGCCCACATCTTC
CAGACATTCCCTACTCAGTTGAGCTTCTTGGAGCCTCTGGTGGCGATTTT
GCTCATCTACCGGTCGCTTCCCTTTAGCGGACTGATCCTGTTCTTCGGCC
TGCAATGGTTTGCTGCGAAGCCGGAGGTGAACAAGCTGGTGCGGTTCAAC
CTCCGGCAAGCGGTCATCATCGACATCGCCATGTTCTTCCCGTCCATATT
CGCCTTCATCATCACGTCCGTCCTTGGCGAGGACTCGGCGAAACTCGCAC
CCCTCGCGACCGTCTGCAGCGACGTCATCTTCGTTACGGTGGTGGCCTGC
GTGCTGTACTCGATAGCTTCGTCCGCCATCGGGGTAATGCCGGAGTCGTT
GCCCATTCTCGGGAAGATGAACAGGGAGAGCACTCGCGCCGAGGAGGACG
ATGGCGAGAAGAAGGACGGCGAGAAAAGCGACGAGTAGGGGAAGTCCTTC
GAGCCTGTTGGGGTTTCATGTGCTGTGTAACGATCGGGAGTAGATCTCAA
CAGGCTACCGTGGACGTGGTTAGAGTATTATTGAGCCTGGCGGGCTTTAG
AGATTAGAGACGGAGGGTTCTGCCGGAGGTGCGCCGTGCGTGTGCGATTG
TGCGAATAAAAAACGTAGAGCTGGGGGCTTGTGCTTTGATTCATGGATAG
ACAGTTGCCCTGGAAAGCAGTGGTACCGACAGGCTGGGCTCTAGCAGGCC
AATGCGAAAGTGGAATGGGATGGGATGGGATGGGATGGGATGGCCCGTGA
ACCTCTGTGACGAAACGAGGGGTGACTCGACGACTGCTTTGTGTGGCACC
CGAGTTTTGAGTGTTGTCAAGCTGTTCTTCTGTTTTTTTCACTTCAGCGT
GGTAGAATACCTTCGTCTTGGTCGAATTGGCGCCACGACTATGTCGCCGT
GCTTAGCTCTTCACACAAAGAAGTGCTTGTCCAGACAAGCGTGTCGTTTT
CACTTTCTTTGGTTCAACCAAAAGCACGTCCTGAGAAGTTGTAAGTATGT
TCGTTAGGATTTAGTGGGGTCTCCATGGTTGGTGCAGGCCACTACATAGC
TTGAGCAAATGTTCATGTCGTGAGCAGATGGCGTACCACCCCTCCGGGGA
TAGTCGTTATGTCCTACAATGCCACACCTCGCCAGCATGGTTGTTTGGTC
ACCTCGGTAGTTGGCTAGTTGCTTTGGCGACAAGCTTTGCCTAGAAAAAG
TACGGGATGATGGGAGAACTTTCACTGTTGAGTGCTGTTTTGGCGGTCTG
TCGGCGCTTTCCGACGCCGGCTTAGACGACGCGCTTTGTCGAGTTTGTTG
TTCAGAAACGAGCTTAGCGTCTACGCACGAGCATTGCCGTAGAGAGGGGT
AGTTGTGCTGAGGCATACCCGTGGCGGTTGGTGTGTGAATGGTTCCTCGG
AAACTCACTTACCGCGGGATCGACGCAGTCGAATGTGTTTCTTTCCTCGC
TGAAGCTTTCCATACTGTTGGAGAATTTGCCGAATTGTGTACGATTTCTT
CTTGTCCCGCGAAAGATCTGAAATTCCGTCTTGTTGCCCACGATCGGTGT
TGCTCCGTGAAGCGTGTAGCTTATGGTACCATGAGAACCGGAAGTGCACG
AGACATGGAATGAAAAGACGAAAACCAGTGCGAATTGATGCAATGACACG
TCCACTTCATTCGTATGATATGGTTGGACGCATGTAGATGTGGTGGTTGA
AAGGACTACGTCGGCGCCCGGAGCCACGAAAATAGCACGTGTCCAACCAA
TGACCTTGACAATGTGAGCTAGGGTATGGAAGACAGGGGAGAGAGGGAAT
GGCAGAATGCTCCCGGCAGGGCGTCTGCCGCCAACAACGGCAATGGCATG
GCAAACACGCCGATAAATATGCAGGATGGGTCGAAATCCCGAATTACAGA
TGACAACGCAGTGAACTAAGAGC
back to top

protein sequence of EsuBft890_8a-0001

>EsuBft890_8 ID=EsuBft890_8|Name=EsuBft890_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=434bp
MVQSYEANVQYSAAMKLSLLCLGGAAAFMTPPSLVTHPQHMRSSGASRGA
AAAVAPRRFVLSMANDEARESAVASSGAEEAAEKAAKLRAFAAELRLQAE
ELESKRDSEKQQAAKEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRM
TKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSE
FASKADMRVRLDSLFADRAQAARLEAAAAREREIEKRGADKARQEAKARG
LALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLE
PLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVIIDIAM
FFPSIFAFIITSVLGEDSAKLAPLATVCSDVIFVTVVACVLYSIASSAIG
VMPESLPILGKMNRESTRAEEDDGEKKDGEKSDE
back to top

mRNA from alignment at Scaffold_178:144529..150764-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft890_8a-0001 ID=EsuBft890_8a-0001|Name=EsuBft890_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6236bp|location=Sequence derived from alignment at Scaffold_178:144529..150764- (Ectocarpus subulatus male Bft15b)
ATGGTTTCCACACACGCGATATCAACCAACATCAACACATCAACAACGAC
GAAGACACGACACGTTTCCCGCTAAGACTAACCATGGTCCAGAGCTATGA
AGCGAATGTCCAATATTCTGCTGCTATGAAGCTGTCGCTCCTCTGCCTCG
GAGGTGCGGCTGCGTTCATGACGCCGCCTTCGCTGGTGACACATCCACAA
CACATGCGCAGCAGCGGTGCATCGCGTGGAGCAGCCGCAGCTGTTGCGCC
ACGCCGGTTCGTCTTGAGCATGGCGAATGACGAGGCGAGGGAGTCTGCCG
TAGCGTCAAGCGGCGCTGAAGAGGCTGCGGAAAAAGCAGCGAAGTTGAGG
GCATTTGCTGCGGAGCTCCGGTTGCAGGTGTGTTTGTCTCGATGCCAAAC
ATGACTGCAAAGCCTACATGCGGCCTTTTTCACAGCAAGCAGGAAACCCC
GCCGCGGTACGGCAAGACAAGAGTAGACAAGAGCCTTGAGGCGTGAATAG
AGTTGGACAGAACCGCGCAATTTAGCTGGGGTGCTTATGTCGCAACCTGC
GAGGTACATGTACACACTAGTTGTGAACATATGCCACTTCCTCGCCAAAT
GTCCTTCATCAAAGACAAGAGAAGAAATGGAGTTGAGTTTGTTGCGTGAA
GGTTGCAAGTTTAGGTGTGTACCGGCTCATATGCTCGCAGTCTACAAGTA
AGGGCTGAAAGAGAGTACTGGCCAGCTCAATGCGGCGCTGCTGGCCTGCT
TGCCGTCCTGTATTCGGGGCTGCTTCACAGAGTGTTATTGCGTTTTATTT
AACGGTAAACTCTCCTCTCCGCTTCTCTATGGATTGTTACAGCACGGTCA
AACTTGACCACGAACGTAAACATGGGACTACCGGCGTGAGTATAAATACA
GCCCGCTTCTGATTCTAGCCGAACGTCCAGTGCATTCCTGCAACCTTGTT
AAAGTTTGCCTCGAAACATGAATCTCGGCGATGAACCAAGAAAAAAACAA
GTTTTGCCTTCGCCGCTGTGACACAGCAGAGACTCCATTATTCAGTTGGA
AACGTGGCCGGACACTATGATCGGATTCGGAAGTCCCGTATCATGTGTTT
CGGATCACATTTCCGCGATCAGAACCCCGTTGACTCGTGCTACCTGTTCT
TTCTAAACCCTTGTCTACTGATGTTCTGGACACGTCTGTGCCCTCACTCT
GAACTCCCGAAACATACATGTGGTTCGGGAAAGGCGGAGGAGTTGGAGTC
AAAGAGGGACTCGGAGAAGCAGCAGGCGGCGAAGGAGGCGTTCGATTCTT
TCGACACGAACGACGACGGTGAGACAAGCAACATGCTGTGTTTTTTGCTG
CATACACTGGTGTGAAAGCCACGGCGAAACATCATGTCTTACCTCGCGCC
GTGTGTACAGTACCTTCTTTCGGCAGACGACATGACCTTGTGAGTAGTAG
GGAGTTGGGTAATCTGGCCCGCAACGACCAGTAGCAAGAAGCTTGCAGTT
GGTCGATCCCCCGGCACCCTCCCCCTTGCTTGTTATGAGGAGCATATAGC
GCCTGTTGTTTCCATCGCTTGGCCCCGTCCATGCACTGGAGGCGGCACTT
TGTCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCC
CCCTCCTCTGACCCAAGAAGATCGATGGCATGACGCTCATGATAATGACA
CCTCAGGGACGGTGGACGTGAAGGAGTTGATCGCAGGGTTGGAGGGGCAG
CTCAGGAAGGACTTCATCAAGCGCATGACCAAGACGATGAAGAGGAAGCC
TTCTCCGGCTGAGGTCGACGAACGGATTTCGGAAATGCCCGGTGGAAGTC
TGCTCCCGATGGAGGTATGGACCGCACCTTTTCTACGTGGGCGTCGGACG
TATGGTGTTGTTTTGTCTACCCTAGCTACGTCTTTCGCGTTCGTTCTGTG
TTTTGAAGGAAGTACGATGTTACAATGTGGGCATTCCCGAAGCACCGATA
GTGAAAGTCCAAGCCAACTTGCCCCTGTTCTTCCCGTTCTTTAAAAACAA
CGCCTGCGAAGTACCCCGTATCCAAACTCGCCTCCCGCTTCCATGCACTT
TTTGGCTTCGACGATGACATGCACGCCACGCCCAACCGTCTCGCATTCCT
CATCCGCACCAACGGCATGTCGTTCTCTCTCCAGAAACTTCCCCAACCAC
ACACTCCCGCCGCCTCGAAGTTTTGCATCATCGACCATTGACGCTATCTA
TGACCCTGTCCAAGCCCTAGCCCAACGCCCCTGACGCTTCACGCCATCCC
GTGTCTTCGGCCACCGCAGCTGGCGCAAAAGCTGATCGAGAGTTACGACA
CCAACGGAGACGGGGTCCTCCAGCCGTCAGAGTTTGCCTCCAAGGCGGAC
ATGCGGGTCAGGCTAGACAGCCTTTTTGCCGACCGTGCACAGGTGTGGTC
ATCTCCCTGTTTTGTCCCTTGCTTTTGTTTTCTCTTGGATGTGGCCGCAG
TCTTAGGTCACGAGGGAGAAGGTGCGCCGAAGGGTGCGGAGACGGTTTTG
CTATTTTGAACCTTGCCTATTATCGGGTGCCTCCTACCCAATGCCCCCGT
TGTGTTTGTTTGCGGCCAGGGGGATTCGTTTGTGTCTCGCATTTTGCGGC
TGGATCATTTCTATTTGTATGGCGACTACATATCGTATGTGAAACGTTGA
CCTACTACTTTTGTTGACCGAACGGTGACAACAACAATATCAACAAACCG
TAGCTCGTGTGAACAACTGTACGGAATGATGTAGACAAGGATGCCGTTCC
ATGAATAAGTAAGACTTGCCCTCGAGGGCACCAACGTCGCCTTATTATCT
ATCTTTTGTATCATCCTCGTACGAAAATCCCGCCACTTCAACCACAGGCG
GCTCGGTTGGAAGCGGCCGCCGCAAGAGAGAGGGAAATCGAGAAGAGGGG
GGCAGACAAAGCGCGGCAGGAAGCCAAGGCCAGGGGGCTAGCCCTACCAG
AGGACTTCAACGACGGCCCCCCCACCATCACAGACAAGCTCCTGTCGGTC
CTACCGTACACTCTGCCTCTGATGGACAGCCTCGTATTCGGAGCCCACAT
CTTCCAGACATTCCCTACTCAGGTACTTCTGGTCGCCGTAGTATAGAGCT
AGCCTAACCGTCATTGTTCAAGTCGTTTTTGTGCCAGGTCGTCTCTCGTT
TGGTAGTGAAGTCTTGCCATCGCTGCAGCTGCAGATTTTACCCGTCGTTT
TTCTGAGTCCCGTGGCAGTCTGGGTGCCTTGGTCGCCTTGTTTTGGCCTC
GCTGGGGCGGTCGGTGACGATCCTACCAGCCACAGTTGATTATCTGCTCG
ATCGAACCGAAATCATGAAATTTCGGTGTTTCCTCAAGATTTTCTTCCTG
TTCACCATGGAAGCTAGCTTCTTGCATGTGCTTCGAATTGTTTCTGCTGG
CAGTTGGGTTGTTGACCACGCCTCTGCTCACCCACACGGGTTTCTCACGC
GGATTGTTTTTCAACAGATTGGACAATATTCTCGACGTCACCTACCTTGT
TTTGAAGCATCCCATTTTGTTTGTATTTTTGGTGCTGTCGATCGCCGTTG
GCAGTTGAGCTTCTTGGAGCCTCTGGTGGCGATTTTGCTCATCTACCGGT
CGCTTCCCTTTAGCGGACTGATCCTGTTCTTCGGCCTGCAATGGTTTGCT
GCGAAGCCGGAGGTGAGCAAGGATTCATCGATAGCTGAGCAGCTTGTTGC
TGTCGTCTTCGATTCGATAGTCGCTGTTCTTATCGTAGCGTTTGTTCTGG
ATGACCCCTAGCTTGGGGGGTATATCATGCATTGCGTAGAATGACACTCA
CATCTACGTACTCTTGTATAGGGGTGATACGCTTATTATTCGGGTGCGGT
TGTTTGTGGATGCTGGCCACAAGAAGAGCACGAAGCACACATCGCCAACC
TTCATCTGCCGCGTTGTGCACGCCCGCGATTACTGTGACACCCCGCTCTA
CATCCAAGTTTCCTTATGGTTTGTTGGATTTGTTTTCGCACTTGAGCAAT
CGACGTCGTTGGGCTTTCCATCAAATGACAACATGTCCAATATTTGACAA
TCCTGTACATTATGTGGTCGACCGCGTTGAAAATTCAATGCTCTTGGTGT
TGGGTGTCGATCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCATTTTTTGTCAG
TTTATCCCCCAAGTTGATTGTGTTGGTCGGGCTAGAAACGGAAAGTACCG
TTCATCAACGCACCACAACCGATGAATTTTCGAACGCAGGTGAACAAGCT
GGTGCGGTTCAACCTCCGGCAAGCGGTCATCATCGACATCGCCATGTTCT
TCCCGTCCATATTCGCCTTCATCATCACGTCCGTCCTTGGCGAGGACTCG
GCGAAACTCGCACCCCTCGCGACCGTCTGCAGCGACGTCATCTTCGTTAC
GGTGGTGGCCTGCGTGCTGTACTCGATAGCTTCGTCCGCCATCGGGGTAA
TGCCGGAGTCGTTGCCCATTCTCGGGAAGATGAACAGGGAGAGCACTCGC
GCCGAGGAGGACGATGGCGAGAAGAAGGACGGCGAGAAAAGCGACGAGTA
GGGGAAGTCCTTCGAGCCTGTTGGGGTTTCATGTGCTGTGTAACGATCGG
GAGTAGATCTCAACAGGCTACCGTGGACGTGGTTAGAGTATTATTGAGCC
TGGCGGGCTTTAGAGATTAGAGACGGAGGGTTCTGCCGGAGGTGCGCCGT
GCGTGTGCGATTGTGCGAATAAAAAACGTAGAGCTGGGGGCTTGTGCTTT
GATTCATGGATAGACAGTTGCCCTGGAAAGCAGTGGTACCGACAGGCTGG
GCTCTAGCAGGCCAATGCGAAAGTGGAATGGGATGGGATGGGATGGGATG
GGATGGCCCGTGAACCTCTGTGACGAAACGAGGGGTGACTCGACGACTGC
TTTGTGTGGCACCCGAGTTTTGAGTGTTGTCAAGCTGTTCTTCTGTTTTT
TTCACTTCAGCGTGGTAGAATACCTTCGTCTTGGTCGAATTGGCGCCACG
ACTATGTCGCCGTGCTTAGCTCTTCACACAAAGAAGTGCTTGTCCAGACA
AGCGTGTCGTTTTCACTTTCTTTGGTTCAACCAAAAGCACGTCCTGAGAA
GTTGTAAGTATGTTCGTTAGGATTTAGTGGGGTCTCCATGGTTGGTGCAG
GCCACTACATAGCTTGAGCAAATGTTCATGTCGTGAGCAGATGGCGTACC
ACCCCTCCGGGGATAGTCGTTATGTCCTACAATGCCACACCTCGCCAGCA
TGGTTGTTTGGTCACCTCGGTAGTTGGCTAGTTGCTTTGGCGACAAGCTT
TGCCTAGAAAAAGTACGGGATGATGGGAGAACTTTCACTGTTGAGTGCTG
TTTTGGCGGTCTGTCGGCGCTTTCCGACGCCGGCTTAGACGACGCGCTTT
GTCGAGTTTGTTGTTCAGAAACGAGCTTAGCGTCTACGCACGAGCATTGC
CGTAGAGAGGGGTAGTTGTGCTGAGGCATACCCGTGGCGGTTGGTGTGTG
AATGGTTCCTCGGAAACTCACTTACCGCGGGATCGACGCAGTCGAATGTG
TTTCTTTCCTCGCTGAAGCTTTCCATACTGTTGGAGAATTTGCCGAATTG
TGTACGATTTCTTCTTGTCCCGCGAAAGATCTGAAATTCCGTCTTGTTGC
CCACGATCGGTGTTGCTCCGTGAAGCGTGTAGCTTATGGTACCATGAGAA
CCGGAAGTGCACGAGACATGGAATGAAAAGACGAAAACCAGTGCGAATTG
ATGCAATGACACGTCCACTTCATTCGTATGATATGGTTGGACGCATGTAG
ATGTGGTGGTTGAAAGGACTACGTCGGCGCCCGGAGCCACGAAAATAGCA
CGTGTCCAACCAATGACCTTGACAATGTGAGCTAGGGTATGGAAGACAGG
GGAGAGAGGGAATGGCAGAATGCTCCCGGCAGGGCGTCTGCCGCCAACAA
CGGCAATGGCATGGCAAACACGCCGATAAATATGCAGGATGGGTCGAAAT
CCCGAATTACAGATGACAACGCAGTGAACTAAGAGC
back to top

Coding sequence (CDS) from alignment at Scaffold_178:144529..150764-

>EsuBft890_8a-0001 ID=EsuBft890_8a-0001|Name=EsuBft890_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1305bp|location=Sequence derived from alignment at Scaffold_178:144529..150764- (Ectocarpus subulatus male Bft15b)
ATGGTCCAGAGCTATGAAGCGAATGTCCAATATTCTGCTGCTATGAAGCT
GTCGCTCCTCTGCCTCGGAGGTGCGGCTGCGTTCATGACGCCGCCTTCGC
TGGTGACACATCCACAACACATGCGCAGCAGCGGTGCATCGCGTGGAGCA
GCCGCAGCTGTTGCGCCACGCCGGTTCGTCTTGAGCATGGCGAATGACGA
GGCGAGGGAGTCTGCCGTAGCGTCAAGCGGCGCTGAAGAGGCTGCGGAAA
AAGCAGCGAAGTTGAGGGCATTTGCTGCGGAGCTCCGGTTGCAGGCGGAG
GAGTTGGAGTCAAAGAGGGACTCGGAGAAGCAGCAGGCGGCGAAGGAGGC
GTTCGATTCTTTCGACACGAACGACGACGGGACGGTGGACGTGAAGGAGT
TGATCGCAGGGTTGGAGGGGCAGCTCAGGAAGGACTTCATCAAGCGCATG
ACCAAGACGATGAAGAGGAAGCCTTCTCCGGCTGAGGTCGACGAACGGAT
TTCGGAAATGCCCGGTGGAAGTCTGCTCCCGATGGAGCTGGCGCAAAAGC
TGATCGAGAGTTACGACACCAACGGAGACGGGGTCCTCCAGCCGTCAGAG
TTTGCCTCCAAGGCGGACATGCGGGTCAGGCTAGACAGCCTTTTTGCCGA
CCGTGCACAGGCGGCTCGGTTGGAAGCGGCCGCCGCAAGAGAGAGGGAAA
TCGAGAAGAGGGGGGCAGACAAAGCGCGGCAGGAAGCCAAGGCCAGGGGG
CTAGCCCTACCAGAGGACTTCAACGACGGCCCCCCCACCATCACAGACAA
GCTCCTGTCGGTCCTACCGTACACTCTGCCTCTGATGGACAGCCTCGTAT
TCGGAGCCCACATCTTCCAGACATTCCCTACTCAGTTGAGCTTCTTGGAG
CCTCTGGTGGCGATTTTGCTCATCTACCGGTCGCTTCCCTTTAGCGGACT
GATCCTGTTCTTCGGCCTGCAATGGTTTGCTGCGAAGCCGGAGGTGAACA
AGCTGGTGCGGTTCAACCTCCGGCAAGCGGTCATCATCGACATCGCCATG
TTCTTCCCGTCCATATTCGCCTTCATCATCACGTCCGTCCTTGGCGAGGA
CTCGGCGAAACTCGCACCCCTCGCGACCGTCTGCAGCGACGTCATCTTCG
TTACGGTGGTGGCCTGCGTGCTGTACTCGATAGCTTCGTCCGCCATCGGG
GTAATGCCGGAGTCGTTGCCCATTCTCGGGAAGATGAACAGGGAGAGCAC
TCGCGCCGAGGAGGACGATGGCGAGAAGAAGGACGGCGAGAAAAGCGACG
AGTAG
back to top