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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Symbol | MYB |
| Status | Manually annotated |
| Seed ortholog | 2880.D8LQY0 |
| ProteomeId | EsuBft789_7 |
| Protein domains | IPR017930 |
| Protein domains | IPR009057 |
| Protein domains | IPR001005 |
| Protein domains | PTHR10641 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | transcriptional activator myb os:gallus gallus gn:myb pe:1 sv:1 [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 414 |
| Hectar predicted targeting category | other localisation |
| Evalue | 6.75e-40 |
| EggNOG OGs | COG5147@1|root,KOG0048@2759|Eukaryota |
| Date last modified | 2016-09-07 |
| Date creation | 2016-06-14 |
| KEGG ko | ko:K09422,ko:K16599 |
| Description | MYB-like transcription factor |
| Description | RNA polymerase II transcription regulator recruiting activity |
| COG category | ADK |
| BRITE | ko00000,ko01000,ko03000,ko04812 |
| Note | Avia K., annotator |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0031227 |
| GO | 0048566 |
| GO | 0003682 |
| GO | 0006816 |
| GO | 0000082 |
| GO | 0051571 |
| GO | 0048872 |
| GO | 0000122 |
| GO | 0001077 |
| GO | 0006338 |
| GO | 0051574 |
| GO | 0045944 |
| GO | 0048538 |
| GO | 0045624 |
| GO | 0001701 |
| GO | 0030183 |
| GO | 0007596 |
| GO | 0016363 |
| GO | 0000978 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft789_7a-0001 ID=EsuBft789_7a-0001|Name=EsuBft789_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=414bp|location=Sequence derived from alignment at Scaffold_176:121790..126687+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACAACATCATGGCACAACCACCTCAACCCGGACGTACGTAAGGATGC
CTGGAAGCCCGAGGAGGACCTGATCATCTTCCAGTACCACCGAAGCCTGG
GGAACCAGTGGGCCGAGATCGCAAAGCTTCTGCCCGGCAGGACCGATAAT
GCCATCAAGAACCGGTACTACTCCACCATGCGAAGGCTCCAGAGGCAGGC
TGTACGGAAAGGGGGACCTGGGGCGATCCCGACGGCCCTCACGGAGAGAC
TCCTAAAGGAGGCGGCGAATCTTCGAAGGCAAGCCGCGATCCAGGAGGGA
GGGGACGCCGGAGCCATCCGGCCGGAGATGGTGGCCGACGCTCAGGCCAA
GGCGGAGGCGGCTGCCGGAGCTCTCGCGGTTGGACGCATGGGCCAGCACA
ATAGTGACTTGTAG back to topprotein sequence of EsuBft789_7a-0001 >EsuBft789_7 ID=EsuBft789_7|Name=EsuBft789_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=137bp
MTTSWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDN
AIKNRYYSTMRRLQRQAVRKGGPGAIPTALTERLLKEAANLRRQAAIQEG
GDAGAIRPEMVADAQAKAEAAAGALAVGRMGQHNSDL back to topmRNA from alignment at Scaffold_176:121790..126687+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft789_7a-0001 ID=EsuBft789_7a-0001|Name=EsuBft789_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4898bp|location=Sequence derived from alignment at Scaffold_176:121790..126687+ (Ectocarpus subulatus male Bft15b)
ATGACAACATCGTAAGTATATTTTGTTCTTCCTTTCTGCTTGTTCCTTTT
GCAGATGGCACAACCACCTCAACCCGGACGTACGTAAGGATGCCTGGAAG
CCCGAGGAGGACCTGATCATCTTCCAGTACCACCGAAGCCTGGGGAACCA
GTGGGCCGAGATCGCAAAGCTTCTGCCCGGCAGGTATGATAGTAAACACA
GCCCCCAGGCACATTGAAGACACCACCCGCCCGCTCACCCTGAGACAGAT
TCAGGGTCATGCCGGGGGCAGGGGGTACTCGTAGCCGCGCATGCCGTAGT
CGTCAAGCCATTGGCCTCGCATCCCTACAAATGCCGGGAGGGGTATGCGG
TCCTAGTTTCAGGGTGTAATTAGTCCAGGAACCTGCCATGGATATACATA
CAATGTATGAACGGATCGGGTTTCAATTTCACTTCATCGAACTGAGGGAG
CTTCCCGTGCTTGATTTTCTGGGAGACGGTGATGACGGTTACTGCTGTCG
GATGCAACGCCTCTTTCTGTGTGTCGCCGGCCGTCGATTCACATCTGTTC
TTTTTGGACTCCCCCCCCCTGCCCCTCTCGGTGGTCGGCCCGGTGTTTGC
CATCGGGGTTGGGTTTTCGTCGCTTGGCAACGACGTTGTANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCC
CCGGTGTTTGCCATCGAGATTGGGTTTTCGTCACTTGGCAACGACGTTGT
AAAACAAGCCAAGTCACTTCGTGAACTCGGCCACCAGGCTACCGTTTTTT
TTCTTTCCTCTGTTTTTTTTTGGCGGTTACCATAATGGTGGTCGAGTAGA
TCATGTTGTGCGGGGTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGGGCATGG
GCCTTCGAGAACGTCGACGAAGACAAAGAACGGTAGACGACGAAGACGAC
GAGTTCAAATGTGATTGCGGCTTCGAATGCGAAGACCGTGTTCATGTAGT
CGCGGAATGTCCGTTGTACAAGAAGGAGAGGGAAGTGTACGTGACTGAGC
TGGGAAAAATAGATGGAACGTACAGGGAGATGTTTGAGGCATGGAATAGA
GAGGAAAGGACGGTAGCTGTAGTGGGGCATAGGAGGTGGGTTGAAAAGGC
GGGAAGGGATATCGTTAGGATAGACAGACTAGGGGAGACATTTTTGAACC
ACCTTTGGCAAAGTAGAAAGGAACGATTGGGCATCGGTGATCGTTCCTGC
GGGAACAATGCTCCGTCCTCTCGAGGACGAGTGGCCAATGGTCTAACAAC
TATGGCATGCAAAACATAAGGGTAACCCCCCCCGCCCTTCCCGGTAAAGA
CCAACGACTAATATTGGCACCTGCGTTCCCCCTACTTTCCCCGTCCGATG
GAACCAGGACCGATAATGCCATCAAGAACCGGTACTACTCCACCATGCGA
AGGCTCCAGAGGCAGGCTGTACGGAAAGGGGGACCTGGGGCGATCCCGAC
GGCCCTCACGGAGAGGTAGGGGCACAGCTGGGGCACAGTTCACCTCCTTC
CTGTGGTTGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGTATGCCGGTCGTGC
GCGTGCTCTGTTGTATTCGGGTGCGTTTGTATCGTCATAGCATCGACCGC
GCCAACTGGCTGGCCGATGATATATGTTAGTCTCAGTGCGGCTGAGAACA
GGAAATGCTTCTACCAGGCATGGTCTGGGACACCGTGAGGTGTGTGTGCG
TGTCTTTTTCATTAACGTCAACCGCGCTATCCGGCTGACCAATGACATGC
CGCTGCTTCTACTGTGGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCG
TCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTC
GTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGT
CGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCG
TCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTC
GTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGT
CGTCGTCGTCGTCGTCGTCGTGGTCTTGGTGGCGATATTAATAGCTGATT
CTTTCCATTGAAAGCGTTCTATTTTTGTTCTCTTTTCCTCGGTTCTTTCA
TTTTTTTCGTTTTTCTCAATACGGTGCCCCCCCCACCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNCCC
CCCCCCCGTCCCTCCCGCTCTCAAACCCCGTTTCCTTCGTTCCAGCGGCG
AGGCTGCCGGGGCCCCGCCCGAACCGGGGGTCGTGGCTGCCGGCCCCGAC
GGAGGCATGCCTCCAGGGATGGGGGGGGATGTTTCCACTCTCGCAGGAGA
CGCCAATGAGGCGGCAAGGCGAGGAATTGCTTGCTGCTGCTGCTGCTGCT
GTTGTTTTTGCGATGGTCGGCGTCGTTGTCGTTGCTGGCTGTTTCTGCTG
TTGTCGGGTGTCGTTGTCACCGTTGCGAGTTTGGCACATCCTGCCCTGCT
ACTGCTGTTTTACAGCACTACTGCTGTTGTACAGCAGTCGCACCCCTCTA
CTTTTTTTATGACATCTTTTTCAGACCGTTCCTTGCTTCCCTGCGTGCTT
GGAGCAAATCCTTGCCGACACAAGAGCAATCTCTTCATCAACGTCCGGTG
TACCCTACCAGACCCCTTACCGATGTTACCCCGGTTATTTTTTGTGTGTA
CGCTGTCCTGTCCTACCTAGTACTGTATCCTGAACCAACCCTGTTTGTAC
GTACCTGCCGTGCTGGGTGCTGGTATATGGTATGTTCGTGTGTACCCTAT
CCTGTCCTACCGATCGTCCCACCCGATCCGACCCCGCTGGTGCGGACTGT
ACCCCTTATCATCCTAGCATACGTTCTGCTCCCTGGTGTGTATGGCATGT
GTGCATACATTTTTTCAGACTCCTAAAGGAGGCGGCGAATCTTCGAAGGC
AAGCCGCGATCCAGGAGGGAGGGGACGCCGGAGCCATCCGGCCGGAGATG
GTGGCCGACGCTCAGGCCAAGGCGGAGGCGGCTGCCGGAGCTCTCGCGGT
TGGACGCATGGGCCAGGTTCGTACACATGGCAGTGGCGGCTACGGTCGAC
AAAAGTTTTTGACGTTATTTTTTATGACAGCACAATAGTGACTTGTAG back to topCoding sequence (CDS) from alignment at Scaffold_176:121790..126687+ >EsuBft789_7a-0001 ID=EsuBft789_7a-0001|Name=EsuBft789_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=414bp|location=Sequence derived from alignment at Scaffold_176:121790..126687+ (Ectocarpus subulatus male Bft15b)
ATGACAACATCATGGCACAACCACCTCAACCCGGACGTACGTAAGGATGC
CTGGAAGCCCGAGGAGGACCTGATCATCTTCCAGTACCACCGAAGCCTGG
GGAACCAGTGGGCCGAGATCGCAAAGCTTCTGCCCGGCAGGACCGATAAT
GCCATCAAGAACCGGTACTACTCCACCATGCGAAGGCTCCAGAGGCAGGC
TGTACGGAAAGGGGGACCTGGGGCGATCCCGACGGCCCTCACGGAGAGAC
TCCTAAAGGAGGCGGCGAATCTTCGAAGGCAAGCCGCGATCCAGGAGGGA
GGGGACGCCGGAGCCATCCGGCCGGAGATGGTGGCCGACGCTCAGGCCAA
GGCGGAGGCGGCTGCCGGAGCTCTCGCGGTTGGACGCATGGGCCAGCACA
ATAGTGACTTGTAG back to top
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