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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LQY3 |
| ProteomeId | EsuBft789_2 |
| Protein domains | IPR001891 |
| Protein domains | IPR016040 |
| Protein domains | SSF53223 |
| Protein domains | PTHR23406 |
| Protein domains | IPR012301 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | nad-dependent malic enzyme mitochondrial os:arabidopsis thaliana gn:nad-me1 pe:1 sv:1 [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 579 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.22e-47 |
| EggNOG OGs | COG0281@1|root,KOG1257@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00105 |
| KEGG ko | ko:K00028,ko:K00029,ko:K13117 |
| KEGG Reaction | R00214,R00216 |
| KEGG Pathway | ko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200 |
| KEGG Module | M00169,M00171,M00172,M00355 |
| EC | 1.1.1.39,1.1.1.40,3.6.4.13 |
| Description | malate dehydrogenase (decarboxylating) (NAD ) activity |
| COG category | C |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko03041 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0050897 |
| EC | 1.1.1.40 |
| GO | 0004471 |
| GO | 0051287 |
| GO | 1901575 |
| GO | 0004473 |
| GO | 0055114 |
| EC | 4.1.1.3 |
| GO | 0008948 |
| GO | 0006108 |
| GO | 0051289 |
| GO | 0009628 |
| GO | 0009507 |
| GO | 0005524 |
| GO | 0006633 |
| GO | 0006996 |
| GO | 0042803 |
| GO | 0005759 |
| EC | 1.1.1.38 |
| EC | 1.1.1.39 |
| GO | 0044723 |
| GO | 0008270 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft789_2a-0001 ID=EsuBft789_2a-0001|Name=EsuBft789_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=579bp|location=Sequence derived from alignment at Scaffold_176:83314..87864+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTGTTGCTTCCCTGTGTCGATCCGTACCCGCGTCTCTTTTGTCTTCT
TGTTTTTCTGGACAGCTACCTCGGTCTTAACCAGGAGAGGCTAGAGGGAG
ACGAGTACCTCCAGGTGGTGGATGAGTTCGTTGCGGCGGTCAAGGCCAGG
TGGCCAAAGGCCTTGATTCAGGTGGACGCCATTGTCGTCACGGATGGATC
GAGGATACTCGGGCTCGGAGACCTGGGCATGAACGGTATGGGCATCTCGA
TTGGAAAGCTAAACCTTTACGTGGCGGCCGCGGGCTTCCACCCGGCCCGC
GTGCTCCCCTGCGTCATCGACGTCGGGACCAACAACAAGAAGCTTCTGGC
GGACGATAGGCGCAAGTGTATGCGCACGCGCAACCGAACCGTATTTGTGC
GCTTTCTCTGCATTGCGAAGGTTTGGTCGTTCTCGTTGACACCTTGGCCT
GCCCCGTTCGTGGTGTGCGGGGCCGGCAGCGCCGGGATGGGCGTGGTGCA
GTGGCTGTGCAAGGCGATGGAGAAGCACGGGGCCCCTCCTGACGAGGCTG
CAGGTGGGTGCCTCGTGGATGATTGCTGA back to topprotein sequence of EsuBft789_2a-0001 >EsuBft789_2 ID=EsuBft789_2|Name=EsuBft789_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=192bp
MLLLPCVDPYPRLFCLLVFLDSYLGLNQERLEGDEYLQVVDEFVAAVKAR
WPKALIQVDAIVVTDGSRILGLGDLGMNGMGISIGKLNLYVAAAGFHPAR
VLPCVIDVGTNNKKLLADDRRKCMRTRNRTVFVRFLCIAKVWSFSLTPWP
APFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGGCLVDDC back to topmRNA from alignment at Scaffold_176:83314..87864+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft789_2a-0001 ID=EsuBft789_2a-0001|Name=EsuBft789_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4551bp|location=Sequence derived from alignment at Scaffold_176:83314..87864+ (Ectocarpus subulatus male Bft15b)
ATGCTGTTGCTTCCCTGTGTCGATCCGTACCCGCGTCTCTTTTGTCTTCT
TGTTTTTCTGGACAGCTACCTCGGTCTTAACCAGGAGAGGCTAGAGGGAG
ACGAGTACCTCCAGGTGGTGGATGAGTTCGTTGCGGCGGTCAAGGCCAGG
TGGCCAAAGGCCTTGATTCAGGTACTCGGCCAAGGACCGCGGGCACATGG
TCTCCATCGCCTACAACTGGCCCAGCCACGAGGTGATGATTTATTGATTG
TAGTAGGGTTGCGGCAAAGGTTGTTAGTCGTTGGTCGTTGTGGTCGTTCC
TGGATGGTGTTGCTGTTGCAGAAGGGTTGCGGTTGTTTGTCGTTGGTTGG
GTGTGGTTGCTGCTGGACGACGTTGCTGCCCTTTTCAGGTTCAGCAGCAT
CGGTTTGCCTAATCATCAAGTAGCCGCCATCACAACCACCACCATCAACA
ACAGCAATAACCACACCCATAACAACCGCCTCCATCGGCGACCACAACAA
ACAACAACAAACGATAATTGGACGCGGCTGGCCGGCCAACTCCTGGTCCC
GTTCAGGTGGACGCCATTGTCGTCACGGATGGATCGAGGATACTCGGGCT
CGGAGACCTGGGCATGAACGGTATGGGCATCTCGATTGGAAAGCTAAACC
TTTACGTGGCGGCCGCGGGCTTCCACCCGGCCCGCGTGCTCCCCTGCGTC
ATCGACGTCGGGACCAACAACAAGAAGCTTCTGGCGGACGATAGGTGACA
ACGGAGCGTAAGCTATTGACTGTACGGAAGCCTAAGCGAAAGCGTCAAGC
ATTGAGCGTTAAGCAGAAGCGTCGAGCGATACGCGTAAGCGATAAGCGTT
AAGCGTAAGCGTGAAGCGTCAGCGAATGCGTAAGAGTAACAGCAGGCGCA
AGTGTATGCGCACGCGCAACCGAACCGTATTTGTGCGCTTTCTCTGCATT
GCGAAGGTATGTCTGTCACCTTCGCTCCCAGTGTGTATGATTCTGTCCAC
CGCACCGAACGGTCTTGGCTTCTCTTCCGAACAGCGACAGCACGGTGCGG
GGTCACGCGGAGGAGAAGTTTCATCCCCCCGTGGTGCGGCCGTGCTTGGC
ATATCCTACATTTGGTTTCGACCGTGGTGGCCGGCGGACCTTTTAATGAA
ATGAAACCTCGTCAGTTCGGTGAACGCCTTCCAACCAAAGCGACCACATG
CGCTCGTGCCTGATGATGGATAGAATGTGAAGTCGTTTCTACTCCACGGA
CTTCCCCCGAAGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTCGTAGAATGTTGCTGTTG
TTTTGGTGCACTGTACACGAGCGTAGCTGTTGTTACTGTTTTCGTCTCTC
GCATACCATGTTGCATCTGGCGGTTGATAGCTGTTGCTGCATGTTGCCGG
TGAGGTTGTTGTCCAGTCAATCGATGACGCACGTTGCCGGTGTCGTTGTT
GTCCAGTCCACCCATGATATGGTGGTGATAGGTGTGGTTGTGCGGACAGG
TTTGGTCGTTCTCGTTGACACCTTGGCCTGCCCCGTAAGTGTCTCGCGCC
GCGTTTTCGTCTCTTGGTTGCTGTTTCCTTTTTTTCCTAGTTTGAAGACT
TCCGCACGGAGTATGCCAGCAAGCTCCTCGAGCGCTACCGCTACAAGCAC
CTCTGCTTCAACGACGACATACAGGTTCGGTTCTGTTCCCGTTCTTGCTG
TTGGTGTGGTGGTCTGCAGTTGCGAGCATGCGACGGTGCTACACGGTACG
ATGGAAAAACGCGCGGGCGAGAAGAGGTGTAGTGTAGGAGTTTGAGAATA
GCGACGAGAAAGAGGTAGGTAGCGCTACACCCGTACCTCCGACAGGACGC
CGACAGCACACAGCCCACAGCCCACCCCAACCAAGACCACACTGCTGCAG
ACCCCTCCTGGGCGAGACGCTGCGAACATACTACGCAGAAGAGCTCGAGC
AGTCCGAAACCATGTCTTCTCCACATCGAGAGACCGTCTCCCACGGGACA
CCCCGTTCCCCGCCTTTGTATTTTTCGGGGACCCTCCTTGTCGTTTGGCG
GGTCCCCCTCCTGGTGATTTTACGGGATTCCTCTTGGTGATTTTGCGGGA
CCCCTCTCGGTGATTTTGCGGAGGCCCTCCTAGTGAGATTGGTTGATTAA
CCCGTGCTTTGCTGCTTTTGGTGAGTTGGTTGGTTGTTGCCGTCGTCGGC
TCGCGGGTGATTGATCAGGGAAGTGCGATTCTGCGGGCCCCCTCCTGTTG
TGTTATTGTTTATATTGATTCACTTGATTGCTTGGCCGGCGGATCGGTTG
TCGTCGTCCTCAGCGTCTCTCCCCGTGATTTGATTTGATCAGGGAACTGC
TGCCACCGCCCTCGCCGGAATCTACGCGGGACTGGCGGCCACCGGTCGGC
CTTACAGCGATATCCGCCGACTCAGGTCGAAAACCCGTTTCAAGACTTCG
GTTGACCATTTACCGTTGATAATTGGTTACGGTCACCTTGCCCATGCTGC
CGCCCGCCCTGCTCCGTCCTCTCGAGGGCGCGTGGGCAATGGTCTAACCG
CTAAGGCATGCAAAACATGAGAGTACGCCCCCCCTCTTCAAGTTCCGTCG
TGAAAAGTTTCCTCGACCAAGCGTATTGGTCGAAACTCGGGATTTGCTGA
TGGGGCCACTCGGGGAGTAGCGTGGACCTTCGGTCAAACCCCATGTCGAT
TTGTCGTGTCGGAATTTGCGCACCGGCGATAGAGGGGAGAATCTGCCGGC
TTAAAATCGCGCAACGCACCCCAGGCGTTGTTGCGACACACACTTCTAGC
AGCTGAAAAGGTGGCGTTCCATGGAGTGACACTCAGGCCTCCGACGGTCG
TTCGTTGGGAGACTTTTTTCACCCTCCAAGTCTGGGCATGCTTCATCGTT
GCCGATTTATCTTTATTTTTTTTATTTTTTTGCTTGTTTTTTGGAGTGTT
GTTCGGGTTTTCTTTTCTTTTGTGGAATATGTTTCGACTTTGTGGTGTTT
TTTTTTTGTTTTCTGTCTCCTGGTTGGTGTTGCTCCGTCCATGTGGTCGG
ACAAGAAGCGGGACAGAACGCAGGTGTTTTGTTCCTCGTTATTTTGTGTC
ATGTTTGTGGCATGTTTTTCACTCTTGAGGTGTTGTCTTTTGCTTTCATT
CTTGTGTGGTTTTGGGATTTTGTACAGGTTCGTGGTGTGCGGGGCCGGCA
GCGCCGGGATGGGCGTGGTGCAGTGGCTGTGCAAGGCGATGGAGAAGCAC
GGGGCCCCTCCTGACGAGGCTGCAGGTGGGTGCCTCGTGGATGATTGCTG
A back to topCoding sequence (CDS) from alignment at Scaffold_176:83314..87864+ >EsuBft789_2a-0001 ID=EsuBft789_2a-0001|Name=EsuBft789_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=579bp|location=Sequence derived from alignment at Scaffold_176:83314..87864+ (Ectocarpus subulatus male Bft15b)
ATGCTGTTGCTTCCCTGTGTCGATCCGTACCCGCGTCTCTTTTGTCTTCT
TGTTTTTCTGGACAGCTACCTCGGTCTTAACCAGGAGAGGCTAGAGGGAG
ACGAGTACCTCCAGGTGGTGGATGAGTTCGTTGCGGCGGTCAAGGCCAGG
TGGCCAAAGGCCTTGATTCAGGTGGACGCCATTGTCGTCACGGATGGATC
GAGGATACTCGGGCTCGGAGACCTGGGCATGAACGGTATGGGCATCTCGA
TTGGAAAGCTAAACCTTTACGTGGCGGCCGCGGGCTTCCACCCGGCCCGC
GTGCTCCCCTGCGTCATCGACGTCGGGACCAACAACAAGAAGCTTCTGGC
GGACGATAGGCGCAAGTGTATGCGCACGCGCAACCGAACCGTATTTGTGC
GCTTTCTCTGCATTGCGAAGGTTTGGTCGTTCTCGTTGACACCTTGGCCT
GCCCCGTTCGTGGTGTGCGGGGCCGGCAGCGCCGGGATGGGCGTGGTGCA
GTGGCTGTGCAAGGCGATGGAGAAGCACGGGGCCCCTCCTGACGAGGCTG
CAGGTGGGTGCCTCGTGGATGATTGCTGA back to top
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