Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft952_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 113 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft952_3a-0001 ID=EsuBft952_3a-0001|Name=EsuBft952_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1138bp|location=Sequence derived from alignment at Scaffold_176:22142..23339+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGCTACCGCACCAACAACGACCATGATGGTGGCCCTTGTACATCACAGCC
CCGACAACCGTGGGGAGCACGAAACAGACGCTTGGATTTTTTTGTCCAGC
GATCCGAACCATGACTTCGACTTCCATCACGCAGCGATGGAGGTCGTTGT
TGCGCACTACACGACGGGACCGAAGTCTGCGGCCACCGCTGGGAGTGCGG
CCCCACGAGTGCACATGTTTACGGACGGGTGCGGCAAGCAGTACAAGGGG
AAGCGGAACTTTCGAGCAGTGGCGCAGAGCCTGAGGAGGCTTGGTGTCCG
CATTTTGCACAACTTCGCCGTCACTTCTCACTTCAAGGGCACGCATGATG
GCATCGGGGCGCTCATGAAGCGCCTACTTCGGAACGCGGAGATGCATGGC
ACGCGTATCCCCGACGTCGACGTCGCGCACGAGTTTCTTCTAGGCTACGC
CGTGGAGGCGGACAAGGCGCGTGAAGGCCACTTCACAACCTGGTCCCCTT
ACCGGATCAAGAGCTTCGAGGTCAGGAAGTTTGGCCCCAAGGAAATTCCT
CGCCCACCGATAGATCTGACGGGGATCCCTGGAAGTTCCAAGCTGTACTT
TTTCACGGGAACAGAGGACGAGCAGGAGGACGTGCAGGATACCTTTAGTC
TTGTGTGGGCTACTAGTGTGGGGGTGCAGACAGACGATTTTGTGGTGGGA
GCGGCCGGAGACAAGGTGTTGACGGCTAGGAAGTGGGTGGTAGACGAGTC
CAGGGCAAGGAAATGGGCCGCCCCCAAGAAGTTCACCAGATCTTGGAAGT
TGCGGGTTCGGGGCGCATCGTGCTACTGCTCGACTTGCCGAATAGGCTGC
TACGGTGACTGCATGGTAGCGAAGGTGTACCCCGACTTGGTTGGCGAGGT
GATGGAGAAGTCGGGAAAAGAGATGGTTGGGAGACGCACGCTTGGGACTC
AATTGACCGGCGTTATTCTTCCGGTCATATCTTCGGACGAGTCCCCAGTG
GCGCCTACGCTTGACGAGAGCATGGGGGAGGAGGAGGAGGAGGAGGGGGA
GGAGGAGGGGGAGCGGGAGGAAGCGCAATACGTAAGCTCAAGAGGTCGCG
TAAGTATCGCGAAGAAGAGGTTCCCGGAGGTGGGCTAG back to topprotein sequence of EsuBft952_3a-0001 >EsuBft952_3 ID=EsuBft952_3|Name=EsuBft952_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=371bp
MMVALVHHSPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGP
KSAATAGSAAPRVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAV
TSHFKGTHDGIGALMKRLLRNAEMHGTRIPDVDVAHEFLLGYAVEADKAR
EGHFTTWSPYRIKSFEVRKFGPKEIPRPPIDLTGIPGSSKLYFFTGTEDE
QEDVQDTFSLVWATSVGVQTDDFVVGAAGDKVLTARKWVVDESRARKWAA
PKKFTRSWKLRVRGASCYCSTCRIGCYGDCMVAKVYPDLVGEVMEKSGKE
MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEEEEEEGEEEGEREE
AQYVSSRGRVSIAKKRFPEVG back to topmRNA from alignment at Scaffold_176:22142..23339+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft952_3a-0001 ID=EsuBft952_3a-0001|Name=EsuBft952_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1198bp|location=Sequence derived from alignment at Scaffold_176:22142..23339+ (Ectocarpus subulatus male Bft15b)
TGCTACCGCACCAACAACGACCATGATGGTGGCCCTTGTACATCACAGCC
CCGACAACCGTGGGGAGCACGAAACAGACGCTTGGATTTTTTTGTCCAGC
GATCCGAACCATGACTTCGACTTCCATCACGCAGCGATGGAGGTCGTTGT
TGCGCACTACACGACGGGACCGAAGTCTGCGGCCACCGCTGGGAGTGCGG
CCCCACGAGTGCACATGTTTACGGACGGGTGCGGCAAGCAGTACAAGGGG
AAGCGGAACTTTCGAGCAGTGGCGCAGAGCCTGAGGAGGCTTGGTGTCCG
CATTTTGCACAACTTCGCCGTCACTTCTCACTTCAAGGGCACGCATGATG
GCATCGGGGCGCTCATGAAGCGCCTACTTCGGAACGCGGAGATGCATGGC
ACGCGTATCCCCGACGTCGACGTCGCGCACGAGTTTCTTCTAGGCTACGC
CGTGGAGGCGGACAAGGCGCGTGAAGGCCACTTCACAACCTGGTCCCCTT
ACCGGATCAAGAGCTTCGAGGTCAGGAAGTTTGGCCCCAAGGAAATTCCT
CGCCCACCGATAGATCTGACGGGGATCCCTGGAAGTTCCAAGCTGTACTT
TTTCACGGGAACAGAGGACGAGCAGGAGGACGTGCAGGATACCTTTAGTC
TTGTGTGGGCTACTAGTGTGGGGGTGCAGACAGACGATTTTGTGGTGGGA
GCGGCCGGAGACAAGGTGTTGACGGCTAGGAAGTGGGTGGTAGACGAGTC
CAGGGCAAGGAAATGGGCCGCCCCCAAGAAGTTCACCAGATCTTGGAAGT
TGCGGGTTCGGGGCGCATCGTGCTACTGCTCGACTTGCCGAATAGGCTGC
TACGGTGACTGCATGGTAGCGAAGGTGTACCCCGACTTGGTTGGCGAGGT
GATGGAGAAGTCGGGAAAAGAGATGGTTGGGAGACGCACGCTTGGGACTC
AATTGACCGGCGTTATTCTTCCGGTCATATCTTCGGACGAGTCCCCAGTG
GCGCCTACGCTTGACGAGAGCATGGGGGAGGTGGGTGGGGGAGGGGAGAA
GGAAGATGAGGGAGAGGAGGAGGACGATGAGGGGGAGGAGGAGGAGGAGG
AGGAGGGGGAGGAGGAGGGGGAGCGGGAGGAAGCGCAATACGTAAGCTCA
AGAGGTCGCGTAAGTATCGCGAAGAAGAGGTTCCCGGAGGTGGGCTAG back to topCoding sequence (CDS) from alignment at Scaffold_176:22142..23339+ >EsuBft952_3a-0001 ID=EsuBft952_3a-0001|Name=EsuBft952_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1116bp|location=Sequence derived from alignment at Scaffold_176:22142..23339+ (Ectocarpus subulatus male Bft15b)
ATGATGGTGGCCCTTGTACATCACAGCCCCGACAACCGTGGGGAGCACGA
AACAGACGCTTGGATTTTTTTGTCCAGCGATCCGAACCATGACTTCGACT
TCCATCACGCAGCGATGGAGGTCGTTGTTGCGCACTACACGACGGGACCG
AAGTCTGCGGCCACCGCTGGGAGTGCGGCCCCACGAGTGCACATGTTTAC
GGACGGGTGCGGCAAGCAGTACAAGGGGAAGCGGAACTTTCGAGCAGTGG
CGCAGAGCCTGAGGAGGCTTGGTGTCCGCATTTTGCACAACTTCGCCGTC
ACTTCTCACTTCAAGGGCACGCATGATGGCATCGGGGCGCTCATGAAGCG
CCTACTTCGGAACGCGGAGATGCATGGCACGCGTATCCCCGACGTCGACG
TCGCGCACGAGTTTCTTCTAGGCTACGCCGTGGAGGCGGACAAGGCGCGT
GAAGGCCACTTCACAACCTGGTCCCCTTACCGGATCAAGAGCTTCGAGGT
CAGGAAGTTTGGCCCCAAGGAAATTCCTCGCCCACCGATAGATCTGACGG
GGATCCCTGGAAGTTCCAAGCTGTACTTTTTCACGGGAACAGAGGACGAG
CAGGAGGACGTGCAGGATACCTTTAGTCTTGTGTGGGCTACTAGTGTGGG
GGTGCAGACAGACGATTTTGTGGTGGGAGCGGCCGGAGACAAGGTGTTGA
CGGCTAGGAAGTGGGTGGTAGACGAGTCCAGGGCAAGGAAATGGGCCGCC
CCCAAGAAGTTCACCAGATCTTGGAAGTTGCGGGTTCGGGGCGCATCGTG
CTACTGCTCGACTTGCCGAATAGGCTGCTACGGTGACTGCATGGTAGCGA
AGGTGTACCCCGACTTGGTTGGCGAGGTGATGGAGAAGTCGGGAAAAGAG
ATGGTTGGGAGACGCACGCTTGGGACTCAATTGACCGGCGTTATTCTTCC
GGTCATATCTTCGGACGAGTCCCCAGTGGCGCCTACGCTTGACGAGAGCA
TGGGGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGGGGAGCGGGAGGAA
GCGCAATACGTAAGCTCAAGAGGTCGCGTAAGTATCGCGAAGAAGAGGTT
CCCGGAGGTGGGCTAG back to top
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