Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1743_6 |
| Protein domains | IPR014710 |
| Protein domains | IPR018490 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 48 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1743_6a-0001 ID=EsuBft1743_6a-0001|Name=EsuBft1743_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=486bp|location=Sequence derived from alignment at Scaffold_70:261202..263971+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCACTTGCAGGTACTCCTGGTCGAGTCTGGTGAGGCTGTACGATTGGG
AGACCCGCGAGAGAATACCATCAGGAACTACAGCTCGCTGCGAATCAGAG
CAGGGCAGTTGTTTGGAGCTGAAGAGGCCCTCTCCGGGCTACCCAGCTAC
ACCTGCAACCTCACGGCCACGTGCCCACTCCAGTTCTTCGCCATCCCCGC
GGAGGCATTTCTCCGAGCAATAGATGGCGTGTGGACTGAGCCTTTGTACC
GGCTCCGGTCCAGAGTACGTGTGGTCGGCGACGGCTGCAGAGCCGATTCC
GCGGGACAGGCACGCCCTTTGACGGCCGCCGGGATCGACGGAGAGCGCTC
TCTCCCGCGGAACTGGTCAAGCAACGATGCATTGCCGAACCTGACGAAGT
CGAGAACAAGACCGCCACCCGTGATGCTGACACCCATACCCCTGTTCTCC
GGAATCCAGGGGGGATCGGGCTTGGAGGAGAGGTGA back to topprotein sequence of EsuBft1743_6a-0001 >EsuBft1743_6 ID=EsuBft1743_6|Name=EsuBft1743_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=161bp
MHLQVLLVESGEAVRLGDPRENTIRNYSSLRIRAGQLFGAEEALSGLPSY
TCNLTATCPLQFFAIPAEAFLRAIDGVWTEPLYRLRSRVRVVGDGCRADS
AGQARPLTAAGIDGERSLPRNWSSNDALPNLTKSRTRPPPVMLTPIPLFS
GIQGGSGLEER back to topmRNA from alignment at Scaffold_70:261202..263971+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1743_6a-0001 ID=EsuBft1743_6a-0001|Name=EsuBft1743_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2770bp|location=Sequence derived from alignment at Scaffold_70:261202..263971+ (Ectocarpus subulatus male Bft15b)
ATGCACTTGCAGGTACTCCTGGTCGAGTCTGGTGAGGCTGTACGATTGGG
AGACCCGCGAGAGAATACCATCAGGAACTACAGCTCGCTGCGAATCAGAG
CAGGGCAGTTGTTTGGAGCTGAAGAGGTGTGCATGGGAGGCGGCGGGGGG
GGGGCGGGGGGGACTCATAGTCGTGCATTCCGTAGTCGTTATTAGACCAT
TGACCTCGCATCCCTACAAAGCACGCCGGGTTATCACCGGACCAGGCTCT
GACATCATCAAACGCGAAGCGCCGTGAGGTATTCGGTGAATCACATGGAG
GGAGGAACAACGATTGTGCAAGTCGTCGGACGCTCAAGGTTGTATCTATG
TTACCTGTGTAGAACAGGTGTTTGAGAGAGGGCTAGCGAGTTTCGGCTGC
TGGCACACAAGCTAAAAAAAAACTCTCGTTGTGTCTGTCGACTGAAATCA
GACAGTGGCGCAACCCGTACGTCCCTCCCGAGGTTGACATCGGGTTGAGG
GAAAACCTAGCGGCATCACGCCACGCAGCAGTACGCATTCTTCCGTGATG
AGGGGGCTGCTGTACAACACGGTGGTCAGGTAGTCCGCTTGGTCTTAGTT
CACCCCTGTATTCCCCTACTTGAACTCCTCATCTGCACGCCGGGTCACTA
GGTATTTTCGCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCCATCGGGGTTGGGTTTTCGTCGCTTGGCAAC
GACGTCGTAGAACAAGCCAATTCACTCCGTGAACTCGGCCACCAGGTTAC
CGCTTTTTTTCATTCCCTCTGTATTTCTTTTCGGCGGTAACGATAATTGT
GGTCGAGTAGATGACGTTGTGCGGGGTCGAGAATCCTCACTCCGCGCAAG
GGGGATGATCGCACTACGTTGTGTTAAATCGGTCAAGCACCCTCGAGGCA
GCTACACAGTGCTTACAACTGTCTCTGNGGTGATGTGAGAGCCTGGTCCG
GTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAAT
GGTCTAACGACTACGGCATGCATGACTATGAGTACACCCTCCCCTCAATC
GGCGGGAAGTAATACCAATAATTATTGTAGGGGAAGAAGAAGGAACGATT
GGCCATCGATGACCGGTCCTGTGTGAGTAATACTCCGTCCTCTCGAGGGC
GCGTGGTCAATGGTCAAATCGCTGAGGCATTTAGAACATGAGGACCCCTC
CCCGCCATCATTTTTTTCATCCGCAGGCCCTCTCCGGGCTACCCAGCTAC
ACCTGCAACCTCACGGCCACGTGCCCACTCCAGTTCTTCGCCATCCCCGC
GGAGGCATTTCTCCGAGCAATAGATGGCGTGTGGACTGAGCCTTTGTACC
GGCTCCGGTCCAGAGTACGTGTGGTCGGCGACGGCTGCAGAGCCGATTCC
GCGGGACAGGCACGCCCTTTGACGGCCGCCGGGATCGACGGAGAGCGCTC
TCTCCCGCGGAACTGGTCAAGGTACACACGGGCCTCTCTACCGCAAAAAT
TACGCCGGCTGTTGTAGCGCCGTTTGACTCGATTAGCGGTGAGGGCGGCT
CGGCCCGCGCTTGTTTTGGACCTACAGTAGGTCGTGTGACGAGATCATTT
GAGCCCTTGTTATTTCGGTGCGCAGTAAACCCATTTTTGAGGATATGGGT
GGGGAGGAGAGGATGGTGAGACGACCTACTGTATGCACGTCGTACTCCAA
GGGCTCGACTTCGATCCACCGGCCAGTCCCTGATTGAATCGTTTGTTTGC
CTTCCAACAGAAGACCCTGCAGTAGCAGCTCGCTCTCTGTTCGTACATAC
AAGCGAGGTTTTTGTTCAGTCAAGACAGATGTCCGTGCACCCCTTCCGCG
TGCCGCCGCCGCCCAACATGAATGGCCTGCCTTTTCTTCTATACGGAACA
TGCAGCAACGATGCATTGCCGAACCTGACGAAGTCGAGAACAAGACCGCC
ACCCGTGATGCTGACACCCATACCCCTGTTCTCCGGAATCCAGGGGGGAT
CGGGCTTGGAGGAGAGGTGA back to topCoding sequence (CDS) from alignment at Scaffold_70:261202..263971+ >EsuBft1743_6a-0001 ID=EsuBft1743_6a-0001|Name=EsuBft1743_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=486bp|location=Sequence derived from alignment at Scaffold_70:261202..263971+ (Ectocarpus subulatus male Bft15b)
ATGCACTTGCAGGTACTCCTGGTCGAGTCTGGTGAGGCTGTACGATTGGG
AGACCCGCGAGAGAATACCATCAGGAACTACAGCTCGCTGCGAATCAGAG
CAGGGCAGTTGTTTGGAGCTGAAGAGGCCCTCTCCGGGCTACCCAGCTAC
ACCTGCAACCTCACGGCCACGTGCCCACTCCAGTTCTTCGCCATCCCCGC
GGAGGCATTTCTCCGAGCAATAGATGGCGTGTGGACTGAGCCTTTGTACC
GGCTCCGGTCCAGAGTACGTGTGGTCGGCGACGGCTGCAGAGCCGATTCC
GCGGGACAGGCACGCCCTTTGACGGCCGCCGGGATCGACGGAGAGCGCTC
TCTCCCGCGGAACTGGTCAAGCAACGATGCATTGCCGAACCTGACGAAGT
CGAGAACAAGACCGCCACCCGTGATGCTGACACCCATACCCCTGTTCTCC
GGAATCCAGGGGGGATCGGGCTTGGAGGAGAGGTGA back to top
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