EsuBft1074_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1074_3a-0001 ID=EsuBft1074_3a-0001|Name=EsuBft1074_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2033bp|location=Sequence derived from alignment at Scaffold_70:69641..75539+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GTGGAATACCTTGCGATGAGCGCTACGCGGACGCTTCGTGCTGCTACTGC
TGCTGGAAGGGGTTCCGCCCGAAGATGTCATTGCATAAGCGCAGCCTGGC
CTCAGACGGGTGCAGTCATGGCGTCAAGGCGGGCTGCCTCGACGGGTGTG
GGCATTGTGAGGACCAGGCTGAGAACAGCAGCACCACCGGATGAGGGAAG
CAATGGGTCGGCGCTAGCGGCAGCGGCGGCGACATTAGCTGCCGCTTCGG
CAGCAGCCGCAGCGTTGAACTCTTTCGGAGGCGGTAGCACCTCCGTGGTC
GGGTGTTCCTTGGCGGATGGCGTCGACGCCCCCTACGAGCCCGGCCAGGC
CGTTGGCGTGGGCATTAAGGCCGAGATGTGGAAGACCAAGCATCCGAACC
TGACGATCCTTGAGACCATCGAGGACTCGCCGGTGCTGGGGTTGATGAGC
GTCGTCCGGAACGTCGAGACCGATGGGGGCGCCTTCCTGTCTGCGGCCAA
CAGGCTCATGCGCCAGCTGCTGGACTTCGCCGATATGGGGTTTCCCAACG
ACGATGAGGCGGTGTTTGCCACCCCTGCGAGAGTTATGATGGCGGGCGTT
CTGCCGGAAGATGACGTGAATGTGTGCGCCATTTCCCTGTACCTGGAGAA
CGAGCCGTGCGGGGTATTCGACATGGAGCTGGACGCGGCGTTCCCGTCCT
TCGAGAGGGGTTCCCTCCGAGTGAGGGGCCTCACACGGGGTTCTTCTAGG
GAGCTTCCGCGGGACATGCAGGGGAAGCAGATATTGCTGCTAGCTCCCGT
GGTCGGTTACGCCCAACCGGTATTGGCGGCCCTGGAGAGGCTGGAGCAGG
CCGGTGTTGAAGACGAGAACGTTACTCTGGTTAGCGTTGTCATCAGCAAG
GATGCCCTCGAGACGCTCACGGAGGAAGTGGAGGACATGAGAGTGGTGTG
CTCAGCAATGGATGGCGAGACCCGAGGATCTGACCACCAGGTCGTCCCGG
GAGTGGGAGATTTTTCGCGGCGCTACTTCGAAGCGAAAGCCATAGTGGAG
GCGGAGGCGGCAGCGAGAGCCGCGGAACGATCCGCGGAATCTTCCTCAAA
CGGAAAACGCCGCTGGTGGCGGCTGTGGTAGAGGAGCCGCCTGCCTTGTT
ACTTGAAGCTGGGTTGGGTCAATAATAGGTTGCCGTTGGTCACGGCTGCT
TTCCGAATTATTATTATATTTCTGTTTTTCATTCATCTCCCCAAGGAAAC
GCAGGTAGGGTCGGGAGAACGTGGCAGTCCTTACTACTCCTAAGGAGCCA
CGGGGCGAGAGGCACGTATGTGATTCTCGTGGCGCATGCTGAGTTGGGCT
AGTAATACCTCGGTCGTATTGGTGATGACCTTCTGACCACAGCCGTGCTT
TTGTGCGTGGTGTGCCTGCGTGTTGCGTCTTGTTTCGGAGTGTTCTCGGG
TAACGATCCATAGAACGGACGTCAAGAAGTTTCGAGGAACGTTCCTCGTA
ATTAACCGGGAAAGCGGGGTTTCGATTTCGGCGGTGGAGGTGCGTGGCTT
GGGGGGGATAGATCGTTGGTGGTGGCAACACTTGAAATTCGTAGGGACGT
GGGGAGTAGTGGGCTTGGTGCAATGGAACTCTGCGGACATTTGGTGTCGC
TTGGGTTTTGTTTTTTTTACGTTCAAAGGGGTGTGTTCCTTTGCGTTGTT
CAACACTGACGGCGCCCTTCCTTTTTCTGTCTCAGCGCTGTTTCATTTTC
GAGAATAGAGTAGACGGTGGCCGACAAAGAGGACGGGACCTGCTAAATGT
GGCGGGAAAAGAGAGACAAATATGTCGTGTCGAGAGCAACATGGAGGAGA
ACCAAGCCATCGATAAGACTTAGGCGTGAGTACGTATTTTTTTTTTTTTT
ATCGATGTGTGTCGTTATTCATCGGTCTACTTGGAACCAGGTGTTGTAGT
GGAGAAGGGGGGTATTGGCGTGTGAACACGTTGAACCACAAAGTGATACT
AGAAACCAATCCTCGCTTATGTTTTCTTCCCAG
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protein sequence of EsuBft1074_3a-0001

>EsuBft1074_3 ID=EsuBft1074_3|Name=EsuBft1074_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=371bp
MSATRTLRAATAAGRGSARRCHCISAAWPQTGAVMASRRAASTGVGIVRT
RLRTAAPPDEGSNGSALAAAAATLAAASAAAAALNSFGGGSTSVVGCSLA
DGVDAPYEPGQAVGVGIKAEMWKTKHPNLTILETIEDSPVLGLMSVVRNV
ETDGGAFLSAANRLMRQLLDFADMGFPNDDEAVFATPARVMMAGVLPEDD
VNVCAISLYLENEPCGVFDMELDAAFPSFERGSLRVRGLTRGSSRELPRD
MQGKQILLLAPVVGYAQPVLAALERLEQAGVEDENVTLVSVVISKDALET
LTEEVEDMRVVCSAMDGETRGSDHQVVPGVGDFSRRYFEAKAIVEAEAAA
RAAERSAESSSNGKRRWWRLW
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mRNA from alignment at Scaffold_70:69641..75539+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1074_3a-0001 ID=EsuBft1074_3a-0001|Name=EsuBft1074_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5899bp|location=Sequence derived from alignment at Scaffold_70:69641..75539+ (Ectocarpus subulatus male Bft15b)
GTGGAATACCTTGCGATGAGCGCTACGCGGACGCTTCGTGCTGCTACTGC
TGCTGGAAGGGGTTCCGCCCGAAGATGTCATTGCATGTGAGGGGTTGAGC
AACAAGAGAGGGTTGTGAATCTCTGTCTCTTTGTGGTCGTATCTCGTAAC
TTTAGTTCCACCGCCATTTCCATACAACGTGCAACAACAGGCGATACACG
CGCATTGGGAACGTGCAATCGATGCAGGTAAGCGGCGCACACAGCTGGTA
AACTCGTAATGTTTCCTAGTAGAGGTCGCTGAGTGTCTTTTGGGAATCAA
AACACAGCAGGTACTATTCTAGCGCAGGCATCTCTTGCCTGCGTTCGTCA
TGAACCGCAGCAACCGAGACGCAAACGAGATCTGTACAGCGGGTTCCTCT
CCTTCCACATTTTCTGATGTGATGTGTTTGCATGGTTGTGCGCGAGACAA
CGAGGCGGTAGTAAGGTCCTCTGATTGTTGCTACTTTTGTCTCCAATGTA
TTGACTGCGGAATCGTCGCGATTGGTGCCCCTTCAACTCTACTCCTTGCC
GCCGCAATGAATGTCAACCAACCGTCTGTGCTGTCTGTCTTCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACCGCTGCT
GTTGTGCGTGTGTCGTTAGAAGCGCAGCCTGGCCTCAGACGGGTGCAGTC
ATGGCGTCAAGGCGGGCTGCCTCGACGGGTGTGGGCATTGTGAGGACCAG
GCTGAGAACAGCAGCACCACCGGATGAGGGAAGCAATGGGTCGGCGCTAG
CGGCAGCGGCGGCGACATTAGCTGCCGCTTCGGCAGCAGCCGCAGCGGTA
TGTTATCGATGAATCGCGTGTGCTGCGGCTTGTCCTCGAGGCGGCCCTGC
CTTCCATCGCTTGATAGCCGCTGTCTTTGGAAGTGGGGACGCCTCTACGG
CAGTACAGCATCTCGAGACCTAACTAAATCCCTTTTTCATCGTGCCTGCC
CTGCTGCTGTTGCCGCCTTCACCGCCGTTCACTTCAGTTGAACTCTTTCG
GAGGCGGTAGCACCTCCGTGGTCGGGTGTTCCTTGGCGGATGGCGTCGAC
GCCCCCTACGAGCCCGGCCAGGCCGTTGGCGTGGGCATTAAGGCCGAGAT
GTGGAAGACCAAGCATCCGAACCTGACGATCCTTGAGACCATCGAGGACT
CGCCGGTGCTGGTGCGTCATCGTTCTGCTGGGTCGGCGTGTATTGACTGT
GTGGGTTTAGACTGTGGACTGCCTTGTGTGTGTTGGTGTGTATTCTTTTG
TGTTTGCGACAAAGTTGGTGCCGGGGTTTCTTGCTCTCGAGAACGGCGTC
CGGAGACAAGAGAGCCAAGTCTGACATCGGAAGGAGTGAACGGTGTTCGT
ATGCATGATCCATAGGGAGGGACGTGCCAGCGCTAGTATGTCTATCGGTT
GGCCTATGTTAAATATTGTGCTTGTACCTTGTGTTCTGTAGAAAGAAAAA
ATGCCTCCGCGGGTGTTGCATTTTTTAGTGTCTCACAACACGTTTAAATT
CCTGGGCAAAGATAAGCAAGGGTTGAATGCCAGAATTATGTAAGAAAAGA
AAATGACAACACCAACAGCCACACCAACAACCACAACCACGTGAGACTCG
TGTTACTGCTGTACCCGCAAGCCATGGCGCTTGCAACCGTGCAAAAGTGA
TTTTTTTTAAATCTGTTTTTCCAACACATTGCTGGCTTGTCTGGATGATG
CAACAGGGGTTGATGAGCGTCGTCCGGAACGTCGAGACCGATGGGGGCGC
CTTCCTGTCTGCGGCCAACAGGCTCATGCGCCAGCTGCTGGACTTCGCCG
ATATGGGGTTTCCCAACGACGATGAGGCGGTGTTTGCCACCCCTGCGAGA
GTTATGATGGCGGTAAGCAGTCAGCAGAGAGAGAGAGAGAGAGATCAGTG
AGGGAATAGAGAGAAGAGAGGGAGAGAGGGAGAGAGGGAGGGACAACGAG
AAAAAGAGAGAAACAGACAGCCAGCCAAGACACACACAGAGGCAGAGAGA
GACCAGTGGGAGACAGGGAGAGAGAAACAGAGTGCAAGGCGAAAAACGCT
CATGTTTAAATGTACAGTACTTAAGGCAACAAAGGAAGCAACGAACGGTG
TTACTTGTTTGTATTTTTTTTCCTGCAGAACATTATTTTCCCTTCAACAC
TCCCGCTATCATATCACGGCGTGTGTATCGGTTGGTGTGTTGGTATCACG
CAAGTGTCTTGTTTCTTGCATCGCCGTTGAACATGATCGTACCCGCTGGC
GTATGCTGACGTCACCTTAACCTGACGGTAACAAGAAGCATACGCAGACG
CTTTTCGTTTAAGTGAGCGCAGCCAGTGTGTCACTTGGTAAGATACGACT
ACGAGCATGCTTGCACCCGAGACTGGGGGCATAGTGACTCATCCAGCGTT
TTTTCTTGTTGCCGTAAGCGTGGCGTTACATGTCTGGGGGGGCGTAACTA
CTTCACACATGAGTGCAACCCCCATGTGTGCCGACCACCAGCGGCGGTTA
CCTACTTACCGACGGCTCAGCCCGTCCAACTCGAAACGTCCACAATTATA
TTACATCGCATCTACGCATATCTGCCGTTTTGCAGAGCTTTAAGCTTCCC
TACGGCGCAGTCGGCCCAACTCGAAACGTTAACACTTACGCCGCACATCT
GCATATTTGCAGGGCGTTTAATCCCTGCTCGCCTCCTACGGTTCAGTCCG
TGCAACTCGAAACGTGAACAATTATACCGCAAATTTTGGCAGGGCGTTCT
GCCGGAAGATGACGTGAATGTGTGCGCCATTTCCCTGTACCTGGAGAACG
AGCCGTGCGGGGTATTCGACATGGAGCTGGACGCGGCGTTCCCGTCCTTC
GAGAGGGGTTCCCTCCGAGTGAGGGGCCTCACACGGGGTTCTTCTAGGGA
GCTTCCGCGGGACATGCAGGGGAAGCAGATATTGCTGCTAGCTCCCGTGG
TGAGCTTGCGGCTTGTTTCTTCGTTCTCTTGCTGAAGGCTGTGTGTTTTG
GTTGCTTTTGTGGTGGTTGTTCTCTGCTGGAGATTGCAGGTGCTACTTAC
CATAGATAGCTCCCGAGGTAGCGGTTTGGTTCCGCCTGTCCTCCAGATTA
GGGTTCCGGCGTTATTCTGCCGGGATTCGTTTGTACTGTGCTAATTTTTT
GTTGAGTGCCTGGTGTACGCTATATGTCGCACCTTCCGTGGCTGTTGACG
ACCGTCCCCACCTCTGGTGGTGTTGTCGATTTCAGTTGTACCTCAAGTGA
CACAAGATACCGCACCCCCTGGACCGTTTTCAACGCAAGACTGCTCCACG
ACGAAGAGGGTGCCAAAATCAAATGATACATTCCGGAAATATCTCGACGA
GACGGTTACAACGCCTCCCGCCATCATCTTCGGCGCCGCCATCGGTCTTT
GAAAATCGGTGCAGGGGGTGTGGTGTCTTATGTCATGTCACCTACGTACT
ACAAGGGTTGGTGACACGCTTCACCTTCCGGCGTCGAAATGTCGGGAGCT
AAACTACCGAACTATTCGTCCCGAAATAGTCGTTGTTGTTGTCATGATCA
AATGAAGAGCCGTTCCCAGGCCCCTTGCTCGGTACCTTGAAACATGCTCA
CGAACCGGTTCAACTGACGCGGGCGCCTTCAAATGACACGTTGATGTTTA
TTATGTTTGGAAAAGGTCGGTTACGCCCAACCGGTATTGGCGGCCCTGGA
GAGGCTGGAGCAGGCCGGTGTTGAAGACGAGAACGTTACTCTGGTTAGCG
TTGTCATCAGCAAGGATGCCCTCGAGACGCTCACGGAGGAAGTGGAGGAC
ATGAGAGTGGTGTGTAATTACATTGTAAATGTGTCGTGACGATAGTCTCC
ACTGAAGACGTGTTGAGAATCTTCAGACACGTGAAGGGCGGCCAGTTTTT
TTTTCTATCTGCAAGTGTTTTCAGAACACGGAGTAACACTCGATGGGGTG
TGGAATTCGTAGTGAATGGATGCCAAGAACGGGGGATGGGGTACTTGTGG
GTTAAGCTTGCCAGGATGAAAGCTTAAGCTACCATTTCGACCGATGCCTA
TTAACGTACGAACGCCGGACTTACATCATTAACCTCCCATATCGACCGAT
ACCTATCTACCATACGAACGCCGAACTTACGTTATTTCCGCTGTGAACGC
TACGGTTTAATTGCTGTTACTCGTTTTTCGCGACAGGTGTGCTCAGCAAT
GGATGGCGAGACCCGAGGATCTGACCACCAGGTATACGTGACTAAAAAAA
ACTTTTCTTCTTTTCTTTTTTGTGCCACATTTTCATGTCTTGGCGAAAAC
GAGCTGTATTTAAGAAATTGTACATATAAAATCAAAGAGAGCGTAGTGTA
CCTTGTTTCGGCGTGCGGTGTGTACCCTACTTGTCAATCTGCGTGTTTGC
CGGGTCATGTCCCGGTGACGCCTTCATGTGTAGGTGCGAGTTGGTGCCAC
CTAGCCCACAAAACGTGGTTTAGCTCTGTTGCTTCTGGCTTTCTTCTTTC
GCTGGCTTTACTCTCAAGCACGCCGAAAACGACCATCCACCTGTGACACG
AGATTCGGGCACATGAAGTGGGTGCGAATGTCATCAAACGACCGGTTCTC
ATCCCATTTGTGGGTCGATTGTGAAATTGCTATTAGCAATTTGCCAAACA
AGAGACCTTTCTAATTGTGCTGGTTACTCTTGTACATTTTTTTTTTTTTG
TTGAAGGTCGTCCCGGGAGTGGGAGATTTTTCGCGGCGCTACTTCGAAGC
GAAAGCCATAGTGGAGGCGGAGGCGGCAGCGAGAGCCGCGGAACGATCCG
CGGAATCTTCCTCAAACGGAAAACGCCGCTGGTGGCGGCTGTGGTAGAGG
AGCCGCCTGCCTTGTTACTTGAAGCTGGGTTGGGTCAATAATAGGTTGCC
GTTGGTCACGGCTGCTTTCCGAATTATTATTATATTTCTGTTTTTCATTC
ATCTCCCCAAGGAAACGCAGGTAGGGTCGGGAGAACGTGGCAGTCCTTAC
TACTCCTAAGGAGCCACGGGGCGAGAGGCACGTATGTGATTCTCGTGGCG
CATGCTGAGTTGGGCTAGTAATACCTCGGTCGTATTGGTGATGACCTTCT
GACCACAGCCGTGCTTTTGTGCGTGGTGTGCCTGCGTGTTGCGTCTTGTT
TCGGAGTGTTCTCGGGTAACGATCCATAGAACGGACGTCAAGAAGTTTCG
AGGAACGTTCCTCGTAATTAACCGGGAAAGCGGGGTTTCGATTTCGGCGG
TGGAGGTGCGTGGCTTGGGGGGGATAGATCGTTGGTGGTGGCAACACTTG
AAATTCGTAGGGACGTGGGGAGTAGTGGGCTTGGTGCAATGGAACTCTGC
GGACATTTGGTGTCGCTTGGGTTTTGTTTTTTTTACGTTCAAAGGGGTGT
GTTCCTTTGCGTTGTTCAACACTGACGGCGCCCTTCCTTTTTCTGTCTCA
GCGCTGTTTCATTTTCGAGAATAGAGTAGACGGTGGCCGACAAAGAGGAC
GGGACCTGCTAAATGTGGCGGGAAAAGAGAGACAAATATGTCGTGTCGAG
AGCAACATGGAGGAGAACCAAGCCATCGATAAGACTTAGGCGTGAGTACG
TATTTTTTTTTTTTTTATCGATGTGTGTCGTTATTCATCGGTCTACTTGG
AACCAGGTGTTGTAGTGGAGAAGGGGGGTATTGGCGTGTGAACACGTTGA
ACCACAAAGTGATACTAGAAACCAATCCTCGCTTATGTTTTCTTCCCAG
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Coding sequence (CDS) from alignment at Scaffold_70:69641..75539+

>EsuBft1074_3a-0001 ID=EsuBft1074_3a-0001|Name=EsuBft1074_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1116bp|location=Sequence derived from alignment at Scaffold_70:69641..75539+ (Ectocarpus subulatus male Bft15b)
ATGAGCGCTACGCGGACGCTTCGTGCTGCTACTGCTGCTGGAAGGGGTTC
CGCCCGAAGATGTCATTGCATAAGCGCAGCCTGGCCTCAGACGGGTGCAG
TCATGGCGTCAAGGCGGGCTGCCTCGACGGGTGTGGGCATTGTGAGGACC
AGGCTGAGAACAGCAGCACCACCGGATGAGGGAAGCAATGGGTCGGCGCT
AGCGGCAGCGGCGGCGACATTAGCTGCCGCTTCGGCAGCAGCCGCAGCGT
TGAACTCTTTCGGAGGCGGTAGCACCTCCGTGGTCGGGTGTTCCTTGGCG
GATGGCGTCGACGCCCCCTACGAGCCCGGCCAGGCCGTTGGCGTGGGCAT
TAAGGCCGAGATGTGGAAGACCAAGCATCCGAACCTGACGATCCTTGAGA
CCATCGAGGACTCGCCGGTGCTGGGGTTGATGAGCGTCGTCCGGAACGTC
GAGACCGATGGGGGCGCCTTCCTGTCTGCGGCCAACAGGCTCATGCGCCA
GCTGCTGGACTTCGCCGATATGGGGTTTCCCAACGACGATGAGGCGGTGT
TTGCCACCCCTGCGAGAGTTATGATGGCGGGCGTTCTGCCGGAAGATGAC
GTGAATGTGTGCGCCATTTCCCTGTACCTGGAGAACGAGCCGTGCGGGGT
ATTCGACATGGAGCTGGACGCGGCGTTCCCGTCCTTCGAGAGGGGTTCCC
TCCGAGTGAGGGGCCTCACACGGGGTTCTTCTAGGGAGCTTCCGCGGGAC
ATGCAGGGGAAGCAGATATTGCTGCTAGCTCCCGTGGTCGGTTACGCCCA
ACCGGTATTGGCGGCCCTGGAGAGGCTGGAGCAGGCCGGTGTTGAAGACG
AGAACGTTACTCTGGTTAGCGTTGTCATCAGCAAGGATGCCCTCGAGACG
CTCACGGAGGAAGTGGAGGACATGAGAGTGGTGTGCTCAGCAATGGATGG
CGAGACCCGAGGATCTGACCACCAGGTCGTCCCGGGAGTGGGAGATTTTT
CGCGGCGCTACTTCGAAGCGAAAGCCATAGTGGAGGCGGAGGCGGCAGCG
AGAGCCGCGGAACGATCCGCGGAATCTTCCTCAAACGGAAAACGCCGCTG
GTGGCGGCTGTGGTAG
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