EsuBft957_15a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft957_15a-0001
Unique NameEsuBft957_15a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_68contigScaffold_68:317773..321279 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FZA4
ProteomeIdEsuBft957_15
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsCYTOPLASMIC_DOMAIN
Protein domainsPTHR11055
Protein domainsIPR002891
Protein domainsIPR027417
Protein domainsTRANSMEMBRANE
Ownerapollo_admin@sb-roscoff.fr
Noteadenylyl-sulfate kinase os:aeromonas salmonicida (strain a449) gn:cysc pe:3 sv:1 [Automatic annotation]
Nb exon5
Max annot lvl2759|Eukaryota
Length788
Hectar predicted targeting categoryother localisation
Evalue5.24e-159
EggNOG OGsCOG0529@1|root,KOG0635@2759|Eukaryota
Ec32 ortholog descriptionAdenylylsulfate kinase
Ec32 orthologEc-19_000180.1
Date last modified2016-06-13
Date creation2016-06-13
Preferred nameMET14
KEGG rclassRC00002,RC00078
KEGG koko:K00860
KEGG ReactionR00509,R04928
KEGG Pathwayko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120
KEGG ModuleM00176
GOsGO:0000096,GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019379,GO:0019419,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0055114,GO:0071704,GO:1901564
EC2.7.1.25
Descriptionadenylylsulfate kinase activity
COG categoryF
BiGG ReactioniMM904.YKL001C,iND750.YKL001C
BRITEko00000,ko00001,ko00002,ko01000
Cross References
External references for this mRNA
DatabaseAccession
GO0000103
GO0005524
GO0004020
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft957_15aEsuBft957_15aEctocarpus subulatus male Bft15bgeneScaffold_68 317773..321279 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft957_15a-0001EsuBft957_15Ectocarpus subulatus male Bft15bpolypeptideScaffold_68 317816..321215 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft957_15a-0001-exonagat-exon-32356Ectocarpus subulatus male Bft15bexonScaffold_68 317773..318019 -
EsuBft957_15a-0001-exonagat-exon-32357Ectocarpus subulatus male Bft15bexonScaffold_68 318672..318795 -
EsuBft957_15a-0001-exonagat-exon-32354Ectocarpus subulatus male Bft15bexonScaffold_68 319448..319650 -
EsuBft957_15a-0001-exonEsuBft957_15a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_68 320309..320372 -
EsuBft957_15a-0001-exonagat-exon-32355Ectocarpus subulatus male Bft15bexonScaffold_68 321130..321279 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft957_15a-0001-exonagat-three_prime_utr-23475Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_68 317773..317815 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft957_15a-0001-cdsEsuBft957_15a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_68 317816..318019 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft957_15a-0001-exonagat-five_prime_utr-15280Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_68 321216..321279 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft957_15a-0001 ID=EsuBft957_15a-0001|Name=EsuBft957_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=788bp|location=Sequence derived from alignment at Scaffold_68:317773..321279- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TGTGTACCAGCGTACCAGCAGCGTCACAGCTCGAGAGCACCAGTACCAGC
CACCGAGGTGGAGCATGGCACAGAACACAACAGGCAATCCTGATTGTGCT
GTACATGAAGATGTGGTGTGGCATAGCACACATGTTTCGCGAGAACGAAG
GTGGGAGCTCAAGGGTCAACGAGGGGTCGTGTTGTGGCTAACGGGCCTCA
GTGGTTCAGGAAAGAGCACCGTGGCTAACGCCTTGGATGTCAAGCTTACG
GCAGAGGGCCGGCACACGTACATCCTCGATGGGGACAACGTTCGCCACGG
CCTCAACAGTGGTCTAGGCTTCTCGCCGGAAGACAGGAGAGAAAACGTTC
GAAGGGTGGCGGAGGTGGCCAGATTGATGGTGGATCTCGGAATCATTGTG
CTCGTCCCAGTGATCAGTCCGTACCGCCAAGACCGGGACAGGGCAAGAGG
CAGGTTCAACAGCGGGGAGTTTGTGGAGGTGCACGTGTCTACGTCGCTGC
AGACTTGCGAACAGCGGGACCCGAAAGACCTGTATAAGAAGGCAAGGGCG
GGCGAGATCACCAACATGACTGGCATCGCTGCTGATGCTCCGTACGAGGC
TCCCGAGAACCCCGAGATACAGCTACTGGCGGAAGGGTGTTCGGTCGAAG
CCTGCGCCGACAAGCTTTTGTCGTTCTTGAGAGAGCGGGGCTACCTAAAT
GTACAGCCGCCGACTGCTGGTAGCAGTGGCGGCGGCGATGTGTAGTTTGA
CTCGCCCCCTAGGTGTTTTTTTTTTGTTTTTCTCCCAT
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protein sequence of EsuBft957_15a-0001

>EsuBft957_15 ID=EsuBft957_15|Name=EsuBft957_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=226bp
MAQNTTGNPDCAVHEDVVWHSTHVSRERRWELKGQRGVVLWLTGLSGSGK
STVANALDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRRENVRRVAE
VARLMVDLGIIVLVPVISPYRQDRDRARGRFNSGEFVEVHVSTSLQTCEQ
RDPKDLYKKARAGEITNMTGIAADAPYEAPENPEIQLLAEGCSVEACADK
LLSFLRERGYLNVQPPTAGSSGGGDV
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mRNA from alignment at Scaffold_68:317773..321279-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft957_15a-0001 ID=EsuBft957_15a-0001|Name=EsuBft957_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3507bp|location=Sequence derived from alignment at Scaffold_68:317773..321279- (Ectocarpus subulatus male Bft15b)
TGTGTACCAGCGTACCAGCAGCGTCACAGCTCGAGAGCACCAGTACCAGC
CACCGAGGTGGAGCATGGCACAGAACACAACAGGCAATCCTGATTGTGCT
GTACATGAAGATGTGGTGTGGCATAGCACACATGTTTCGCGAGAACGAAG
GTGAGAAATCCAAGATTGTTCCATTTCATCATTTCAGCTACATGTATGCC
CAGCAGTAGCACCGCATCCCGCGGTAAAGCCGTTACCATGCCATGTCAAG
TCATGTATGGTGTACACTACATAGAACGAGGACGAGAAAGAGGGGCGTAT
CGGCTTGCTCTGTCAACCTATACATGGATGCATGTAGCACGGTTGCCCCC
GTGTTGATCAAGCGAGAACCCACTCGCAGAACAACTTGGCCCGGACAATT
CCCAGCGCACAGCGCACCCACCCCGGGATAGGCCTGTCCTCCATCGGCCG
TTTTGCTTGTATGACGGAGAATAAGAAGGTGGAATTACTTGAAATTAGTA
TGGAAATAAAGTTTGTGTATTTATATCGAAAATAAAACGGCCGATGGAGG
ACAGGCCTACCCCGGGACCCCGGGTAGACTTTGGATCTATTTCGCCGCAC
TCTACCTATTTCGCCGCACTCCTCTGTGCCCTGTATCCAGCAGTTGTTGG
CCCCGGCTTTGAGGGCCCGTTCGACCTCTCCTTCTCTCGATTTCCCTACC
CCGCACTGATATCTAGGGGTAGCCAGGTAAAGTTCGGTCGTCTCTGCGCA
CGTTCGATGCAATTGCACCAAGGACAAAAAATACCATGGTGCTGCTGTAC
AACACCAATGCGGCTCACAGTCCTGGAAGTTATTGGTGCTTTGCATTGTC
GTGATCCCTGGGTGCCGACATCGTGGGCAATTTGCATGTTGGTTTTCCAC
GTTGCAGGTGGGAGCTCAAGGGTCAACGAGGGGTCGTGTTGTGGCTAACG
GGCCTCAGTGGTTCAGGAAAGGTACAGTACGATCGACAAAGGGGCTGAAG
CATCCCACCCTGCTCCCGACACACACCCACACCCGTGCCTTGCTCGCGGT
CTTCAACGTTACCGCAGCAGCAGTATGGTCAATCAAGGCTAGTCCCTTGC
TAGTCCTCACATTTTGTGCAGTCGGAGCCACTATTTTCTCCAGAACAAAA
AAACAATGTATGACTGCGCCTTAATTTAACACGACAAAGCCCGCGTTGGG
ATTGATTCATGGTGTATTTCACGACCATGTTTCATTGCAGCTGTGACGCT
ATTGATCCTCGCATAGTGCAGATGATCGTTCTCATGTCGGTAACAGGCGT
ACCACAGACGGTTGGGTGGGCATCTTGTCTGTTGGATGAGTATTATGGTG
GGAAGAAAAGTCTATGCAGTTATTTTCGCGTGCAGCACGCACGCCTCTTG
CACCCGATGTCCGCCAACTCATTCCGACCGTCCCTGTCACTTCAAAGGAT
GCAAGTAGGAAAACCAACACTTCCCTGTTCAGTACGGACTTACATCGGAA
TAGTCGGTGGACAGCCTGGCTTCATGCCAGTGCCCGAGAGTTTTCACAGT
AGTGCCTGTCACTCGAAAAAAAAAAAAAAACACGCCAAAGTCCGGGCTTG
CTTGTTTTTTCCGTCTTCGATTTCGGCAGAGCACCGTGGCTAACGCCTTG
GATGTCAAGCTTACGGCAGAGGGCCGGCACACGTACATCCTCGATGGGGA
CAACGTTCGCCACGGCCTCAACAGTGGTCTAGGCTTCTCGCCGGAAGACA
GGAGAGAAAACGTTCGAAGGGTGGCGGAGGTGGCCAGATTGATGGTGGAT
CTCGGAATCATTGTGCTCGTCCCAGTGATCAGGTGATCAGGTGGGAGGGA
AAGCAAGGCAGGGGCGGGGCGTGTGCGCGGGCGGTCTGGGTACTGAGGAG
GGTAAAGAAGAGAAGTTTCACCCTCGAACCGAAAGGCGAAAGGTCGGCGG
AAGAGACGAGCGGTGTTTCTGCCGCACAACTAGGGGAAGCAAGTGTTGGG
AGCCCGGCGAGAAGTAGTAGTTCATCTGTAGAATACGAGTAGCATATTGT
ATCACACACAGTTCGCTTTCTATCGCGAGCGTAGGTAGACAATGCTGACT
GACAATGATGTATGCTTGGTACTGGGAAACTTACAGCACCTTCAGCTTGA
TTCCTTCCATCACTGGTCTGGTGTCTGGTGTCTACTGGCTGCTGTCTGCT
GTCTGCTGTGTCATCTCGGTCCTTCGTGGGACAGGATAGCTGGATTGGGA
ATCCATTTCCTTGTGGTTCCGTAGTACACACATGACGGGAAGGAATGACG
GTAAACACCCCGCCAGGTACTGCTTTGTCGACTCTCGTCCCTCTCTCGGC
TCTTCTTTTGTCCTCCTCACCATCCGTAGCTCACGTCTGACAACCCCTCG
TTTCTCTGCTTCCTGTCGCTCTTTCTGCCTCGATTACGTTTATCCTCCTG
CGTTTGACGGATGCCGATTTTGTTGCGTGAGCAGTCCGTACCGCCAAGAC
CGGGACAGGGCAAGAGGCAGGTTCAACAGCGGGGAGTTTGTGGAGGTGCA
CGTGTCTACGTCGCTGCAGACTTGCGAACAGCGGGACCCGAAAGACCTGT
ATAAGAAGGTACGACGGTAACGGTGGTTAGTTATCGTAGTTGCTGTGAAA
GCCGCGTGCCGAGGTTCGATTGTGTAGTGCCCGGCGCGATGCTTTCTTTC
TGGCACAAACAGGCTGATGCGGTGTTGTATTTAAGAATATGGTGTTACGT
GGATATGAGCAACGGTGTTTATGTGTTCTATACACATACATACAGGTCGG
TGGTCGAAGTCGCTGCACTCCATAGGTATCATGCCATAGGTATGTGTTCT
TGTTGGTGGCGATGTGAGACTTGATGGCCGTTCGGGTTGTTGACTGTTGT
GATGACGAGTGCCTCCAAGCGCGCCAGCTTAGATGTTCAATTGACACGAG
AAGTACCCGCGATTGCTTCACGGTGAGCGAGGACGTAACAAACAAACACA
GTCACAACCGGAAAAAAATCGTGGACTATTTCAACAGCACACAACGGGGT
ATGCATGCTGTTGCGTGCCGCCAATCATACCATATCATACCATACCATAC
GACAAGGCTATCGGAGTACCTTATATCCTACGTCTTGGGGTACGAAGAGG
CTATCTTACAGAGGTATTTTATATCTTAATCGGTTGACACAAGAAAGAGA
TCTTTGCATCTCATATCTTAATCTTGTGATATGCAAACGTGATATGATAC
GACGAAACAGGCAAGGGCGGGCGAGATCACCAACATGACTGGCATCGCTG
CTGATGCTCCGTACGAGGCTCCCGAGAACCCCGAGATACAGCTACTGGCG
GAAGGGTGTTCGGTCGAAGCCTGCGCCGACAAGCTTTTGTCGTTCTTGAG
AGAGCGGGGCTACCTAAATGTACAGCCGCCGACTGCTGGTAGCAGTGGCG
GCGGCGATGTGTAGTTTGACTCGCCCCCTAGGTGTTTTTTTTTTGTTTTT
CTCCCAT
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Coding sequence (CDS) from alignment at Scaffold_68:317773..321279-

>EsuBft957_15a-0001 ID=EsuBft957_15a-0001|Name=EsuBft957_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=681bp|location=Sequence derived from alignment at Scaffold_68:317773..321279- (Ectocarpus subulatus male Bft15b)
ATGGCACAGAACACAACAGGCAATCCTGATTGTGCTGTACATGAAGATGT
GGTGTGGCATAGCACACATGTTTCGCGAGAACGAAGGTGGGAGCTCAAGG
GTCAACGAGGGGTCGTGTTGTGGCTAACGGGCCTCAGTGGTTCAGGAAAG
AGCACCGTGGCTAACGCCTTGGATGTCAAGCTTACGGCAGAGGGCCGGCA
CACGTACATCCTCGATGGGGACAACGTTCGCCACGGCCTCAACAGTGGTC
TAGGCTTCTCGCCGGAAGACAGGAGAGAAAACGTTCGAAGGGTGGCGGAG
GTGGCCAGATTGATGGTGGATCTCGGAATCATTGTGCTCGTCCCAGTGAT
CAGTCCGTACCGCCAAGACCGGGACAGGGCAAGAGGCAGGTTCAACAGCG
GGGAGTTTGTGGAGGTGCACGTGTCTACGTCGCTGCAGACTTGCGAACAG
CGGGACCCGAAAGACCTGTATAAGAAGGCAAGGGCGGGCGAGATCACCAA
CATGACTGGCATCGCTGCTGATGCTCCGTACGAGGCTCCCGAGAACCCCG
AGATACAGCTACTGGCGGAAGGGTGTTCGGTCGAAGCCTGCGCCGACAAG
CTTTTGTCGTTCTTGAGAGAGCGGGGCTACCTAAATGTACAGCCGCCGAC
TGCTGGTAGCAGTGGCGGCGGCGATGTGTAG
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