Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft957_11 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 116 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft957_11a-0001 ID=EsuBft957_11a-0001|Name=EsuBft957_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1168bp|location=Sequence derived from alignment at Scaffold_68:278039..279473- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTGCATTTCTCGGCTTCCGGTCCGGTCGTTTGCATGAGGTGCTGCTT
GGGCACGCCGGAGTGCAATTCCACCAGCAATCCTTGTGCCGAGCTTCCCA
TAGCTTGCACCAACAAGATCACGCCTCATCTCCATCGCGATTATGACATG
ATCCCGAAACTATTCGCCGCCATCCAACCGCACATGGCCGTCGATTGCGG
ACTGCACACGAAGGACGGCATACAAATCCCATCCGCTATGTCCATCGGAA
CGAAGCAAAACATCGCCATGTACTTCTACTCCTTCCATCGCGTCTGCTCT
TCCACTCCTTCCATTTCCTTCGCCGCCCTGTTCTTGCACAACGCGACGCG
AGGTGTACCGAACGGGCTGCTCAAGAGGAGCTTTTTTGTGACAGTAAGGA
ACTCGTCGATCTCGACGGCCATGACCAAGAACGTCCGCGCCAGCTACATC
CTCGGCATCACCTTCATCGCCGCTGTCGAGAAGAAGAAATGGGGGCACCA
GAACTGTTGGGGCTACCACATCGCCGCCCTCTCCAACGACGTCACCATCA
TCGAACGCCTATCAAAGACGCCCACCGTAGAAGCGAATGATCTCGCCTCT
CGCCCTACCGCCGGTGCCGGCGCCTCTTCCAACTGCCCCGGCACGAACGA
AAAACGGAAGGTTCCCTCAGGCGCGCGACGAAAGCGTAAAACCGCAAGGT
CCGATCCCCATTCCGTCCCCGCGCCGACTCTTCTGGAGAAGAACCCGAAG
AAGAGGAAACCAACGACGACTACCCCAACGACGAACAGGACCCCGGCTTT
CCCCCCGGCGACGAAGGAGACGACAAAGAAGACAAAGACGTAGACGACGA
CGACACTGACAATGGCGACAACCGCGGCAACGACGACAACGACGATGCCG
ACTCCGATGACGCCGCCTCCGACGACGGCTATGACACCGAATGGTGTCTC
CGTTTATCTGCCTTCCTTTGTTCGTTTTTTTGCCCTGAAGTCGGCCACCC
CTCTGCATCACAGTGTCCGCTTCGGTCTTTCCCGGCGTATGTTTTGCGTG
TTTGTTCGCTGTTGCTTTCGCGTGTCTTCGGCTGTCCTTTCTTGAGTACT
TTTTGATTGTGTCCATCTTGAGTGCTTTTCTACGAATCTTCATTCCAAAC
GATCGTTGAGAGTACTTT back to topprotein sequence of EsuBft957_11a-0001 >EsuBft957_11 ID=EsuBft957_11|Name=EsuBft957_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=280bp
MVHFSASGPVVCMRCCLGTPECNSTSNPCAELPIACTNKITPHLHRDYDM
IPKLFAAIQPHMAVDCGLHTKDGIQIPSAMSIGTKQNIAMYFYSFHRVCS
STPSISFAALFLHNATRGVPNGLLKRSFFVTVRNSSISTAMTKNVRASYI
LGITFIAAVEKKKWGHQNCWGYHIAALSNDVTIIERLSKTPTVEANDLAS
RPTAGAGASSNCPGTNEKRKVPSGARRKRKTARSDPHSVPAPTLLEKNPK
KRKPTTTTPTTNRTPAFPPATKETTKKTKT back to topmRNA from alignment at Scaffold_68:278039..279473- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft957_11a-0001 ID=EsuBft957_11a-0001|Name=EsuBft957_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1435bp|location=Sequence derived from alignment at Scaffold_68:278039..279473- (Ectocarpus subulatus male Bft15b)
ATGGTGCATTTCTCGGCTTCCGGTCCGGTCGTTTGCATGAGGTGCTGCTT
GGGCACGCCGGAGTGCAATTCCACCAGCAATCCTTGTGCCGAGCTTCCCA
TAGCTTGCACCAACAAGATCACGCCTCATCTCCATCGCGATTATGACATG
ATCCCGAAACTATTCGCCGCCATCCAACCGCACATGGCCGTCGATTGCGG
ACTGCACACGAAGGACGGCATACAAATCCCATCCGCTATGTCCATCGGAA
CGAAGGTATGTGTTTTTTTTGGGTCCGAATTTTCGACGCCATAAGTTCGT
TTCCATGAACATTTAACTTGCTCCCTGTTCCCCACTAGGTAACAGCAAAA
CATCGCCATGTACTTCTACTCCTTCCATCGCGTCTGCTCTTCCACTCCTT
CCATTTCCTTCGCCGCCCTGTTCTTGCACAACGCGACGCGAGGTGTACCG
AACGGGTATTTGCGTCACATATTTTGGCATTCATGGTGTCGTGTATTTTC
AACCGTACGTTCTGCCGCCTGTGCGATCATTCTGACTCATACACACCTGT
ACGATTTGCTTGACACGACCTGTTGGTCATTTTCGACCCTCCGCAACTTT
CCTATCTCTCTTCCTCTTTGCCCTTTCCTCAGGCTGCTCAAGAGGAGCTT
TTTTGTGACAGTAAGGAACTCGTCGATCTCGACGGCCATGACCAAGAACG
TCCGCGCCAGCTACATCCTCGGCATCACCTTCATCGCCGCTGTCGAGAAG
AAGAAATGGGGGCACCAGAACTGTTGGGGCTACCACATCGCCGCCCTCTC
CAACGACGTCACCATCATCGAACGCCTATCAAAGACGCCCACCGTAGAAG
CGAATGATCTCGCCTCTCGCCCTACCGCCGGTGCCGGCGCCTCTTCCAAC
TGCCCCGGCACGAACGAAAAACGGAAGGTTCCCTCAGGCGCGCGACGAAA
GCGTAAAACCGCAAGGTCCGATCCCCATTCCGTCCCCGCGCCGACTCTTC
TGGAGAAGAACCCGAAGAAGAGGAAACCAACGACGACTACCCCAACGACG
AACAGGACCCCGGCTTTCCCCCCGGCGACGAAGGAGACGACAAAGAAGAC
AAAGACGTAGACGACGACGACACTGACAATGGCGACAACCGCGGCAACGA
CGACAACGACGATGCCGACTCCGATGACGCCGCCTCCGACGACGGCTATG
ACACCGAATGGTGTCTCCGTTTATCTGCCTTCCTTTGTTCGTTTTTTTGC
CCTGAAGTCGGCCACCCCTCTGCATCACAGTGTCCGCTTCGGTCTTTCCC
GGCGTATGTTTTGCGTGTTTGTTCGCTGTTGCTTTCGCGTGTCTTCGGCT
GTCCTTTCTTGAGTACTTTTTGATTGTGTCCATCTTGAGTGCTTTTCTAC
GAATCTTCATTCCAAACGATCGTTGAGAGTACTTT back to topCoding sequence (CDS) from alignment at Scaffold_68:278039..279473- >EsuBft957_11a-0001 ID=EsuBft957_11a-0001|Name=EsuBft957_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=843bp|location=Sequence derived from alignment at Scaffold_68:278039..279473- (Ectocarpus subulatus male Bft15b)
ATGGTGCATTTCTCGGCTTCCGGTCCGGTCGTTTGCATGAGGTGCTGCTT
GGGCACGCCGGAGTGCAATTCCACCAGCAATCCTTGTGCCGAGCTTCCCA
TAGCTTGCACCAACAAGATCACGCCTCATCTCCATCGCGATTATGACATG
ATCCCGAAACTATTCGCCGCCATCCAACCGCACATGGCCGTCGATTGCGG
ACTGCACACGAAGGACGGCATACAAATCCCATCCGCTATGTCCATCGGAA
CGAAGCAAAACATCGCCATGTACTTCTACTCCTTCCATCGCGTCTGCTCT
TCCACTCCTTCCATTTCCTTCGCCGCCCTGTTCTTGCACAACGCGACGCG
AGGTGTACCGAACGGGCTGCTCAAGAGGAGCTTTTTTGTGACAGTAAGGA
ACTCGTCGATCTCGACGGCCATGACCAAGAACGTCCGCGCCAGCTACATC
CTCGGCATCACCTTCATCGCCGCTGTCGAGAAGAAGAAATGGGGGCACCA
GAACTGTTGGGGCTACCACATCGCCGCCCTCTCCAACGACGTCACCATCA
TCGAACGCCTATCAAAGACGCCCACCGTAGAAGCGAATGATCTCGCCTCT
CGCCCTACCGCCGGTGCCGGCGCCTCTTCCAACTGCCCCGGCACGAACGA
AAAACGGAAGGTTCCCTCAGGCGCGCGACGAAAGCGTAAAACCGCAAGGT
CCGATCCCCATTCCGTCCCCGCGCCGACTCTTCTGGAGAAGAACCCGAAG
AAGAGGAAACCAACGACGACTACCCCAACGACGAACAGGACCCCGGCTTT
CCCCCCGGCGACGAAGGAGACGACAAAGAAGACAAAGACGTAG back to top
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