Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1944_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 67 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1944_8a-0001 ID=EsuBft1944_8a-0001|Name=EsuBft1944_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=678bp|location=Sequence derived from alignment at Scaffold_68:163435..164379+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACGTGTCTATTGAAGGCCACACTTGATGGCGAGATAAAGTGTAGTGA
AGCCTTGGACACTTTCGCCCCAAACCACCGCCAGTGGGTACTCGCACATC
TGCTCGGCCGTGAACTGACTTCCATGGTTGGGATTACGTCCGGCCTAGCT
GATCTTTCCGGCTGTCCGTAATCGTGCTCACCAGGTATTCTGGTACTGGG
TTGTACTGGGGTTGTCGGCCGTGGGCCGTGACCGATCTACATGTCCCCCC
TGTTTTCAAGGAGGCGTCCACCCGCCGAATAAAAGCGGCGGAACGTACAT
TCATAGAACATAGCACATATTCAGTTCAGCAGTCCCATCTGGTTGAGTTC
AGCAAGGAGCACATTCACCGTGCTCTAGCTCACCTTAAAGAGAGGATCCA
CACGACGAGAGCGGTGCCGTAAAAAGAGGGAACGACAGGGTCCAGCTGTT
CCCCACTTACTACCGCGCTTGCAGAAAACTGCAAAGAAAAGGCCCCCTAG
ACTACACGATGACGCAGACGGACCGCAAGGCTCTGGTTGCCCTATACAAC
GCGACCGGTGGGGCCAAGTGGGAAGACACGCGAAACTGGAACACTAGTGC
CGTCCTCTCGCAATGGTACGGAGTCGAAGTCAACTCCCAGGGCCGCGTGG
TGAAGTTATCTCTGGGGGTCAACAACCT back to topprotein sequence of EsuBft1944_8a-0001 >EsuBft1944_8 ID=EsuBft1944_8|Name=EsuBft1944_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=56bp
MTCLLKATLDGEIKCSEALDTFAPNHRQWVLAHLLGRELTSMVGITSGLA
DLSGCP back to topmRNA from alignment at Scaffold_68:163435..164379+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1944_8a-0001 ID=EsuBft1944_8a-0001|Name=EsuBft1944_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=945bp|location=Sequence derived from alignment at Scaffold_68:163435..164379+ (Ectocarpus subulatus male Bft15b)
ATGACGTGTCTATTGAAGGCCACACTTGATGGCGAGATAAAGTGTAGTGA
AGCCTTGGACACTTTCGCCCCAAACCACCGCCAGTGGGTACTCGCACATC
TGCTCGGCCGTGAACTGACTTCCATGGTTGGGATTACGTCCGGCCTAGCT
GATCTTTCCGGCTGTCCGTAATCGTGCTCACCAGGTATTCTGGTACTGGG
TTGTACTGGGGTTGTCGGCCGTGGGCCGTGACCGATCTACATGTCCCCCC
TGTTTTCAAGGAGGCGTCCACCCGCCGAATAAAAGCGGCGGAACGTACAT
TCATAGAACATAGCACATATTCAGTTCAGCAGTCCCATCTGGTTGAGTTC
AGCAAGGAGCACATTCACCGTGCTCTAGCTCACCTTAAAGAGAGGATCCA
CACGACGAGAGCGGTGCCGTAAAAAGAGGGAACGACAGGGTCCAGCTGTT
CCCCACTTACTACCGCGCTTGCAGAAAACTGCAAAGAAAAGGTGGCTCTA
TTCTGTTCCTCTCTCCTCTCTTTCAGAAACTGGGTTGTTGATCCAGCTGC
AAAGTGTGGCATCGTTCATCATTCACATCGCCGAGATTGTTCGCGCTCGA
AGACATTGTTGTGGTTCTTTGATGCAATCATCCTCTTGTGATGCTGGTGT
GATTCACCACTTCAGTCGCGAGAGACGACCAACAGAAATCGATGGTACGT
GTGCTCGTTGAACGAGCGTTTGTCTTCGCGAACGTCCCGCAAACTTTCGC
GTGTCCAGGCCCCCTAGACTACACGATGACGCAGACGGACCGCAAGGCTC
TGGTTGCCCTATACAACGCGACCGGTGGGGCCAAGTGGGAAGACACGCGA
AACTGGAACACTAGTGCCGTCCTCTCGCAATGGTACGGAGTCGAAGTCAA
CTCCCAGGGCCGCGTGGTGAAGTTATCTCTGGGGGTCAACAACCT back to topCoding sequence (CDS) from alignment at Scaffold_68:163435..164379+ >EsuBft1944_8a-0001 ID=EsuBft1944_8a-0001|Name=EsuBft1944_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=171bp|location=Sequence derived from alignment at Scaffold_68:163435..164379+ (Ectocarpus subulatus male Bft15b)
ATGACGTGTCTATTGAAGGCCACACTTGATGGCGAGATAAAGTGTAGTGA
AGCCTTGGACACTTTCGCCCCAAACCACCGCCAGTGGGTACTCGCACATC
TGCTCGGCCGTGAACTGACTTCCATGGTTGGGATTACGTCCGGCCTAGCT
GATCTTTCCGGCTGTCCGTAA back to top
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