EsuBft1178_5a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1178_5a-0001 ID=EsuBft1178_5a-0001|Name=EsuBft1178_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1803bp|location=Sequence derived from alignment at Scaffold_68:135239..138410- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATATTTTAGGCTATGCGAGGAGGACGAGTCACTTTGGTATTTCGTT
TCAGAGAGGTACGGTAGAGGGGTTCAGCTTGCAGGTATACGCTGATGCGG
ACTTTGCAAGCAAGGCAGCAGACCGTAGGTCGGTATCAGGGGGGATCGTG
ACGTGTGGAGGAGGCGCTGTGTCTTGGTTTTCCAGAACGCAAAAGTGCGT
CACACTTTCGACGACAGAAGCAGAGTACGTCGCGCTAGGCGACGTAGTGA
AGGAGATTTTGTTTTTGAGGCAGATTTGGCGTTTCATGTTGCCGCAGGTC
GGCATGCCGTGCATCCCCGTCTTCGAGGACAACCAGGGGGCGATTCAAGT
AGCGCAGAACCCCATCTCAAACTCGAACTCGAAACACATTGATGTAAGGC
ACCATTTTCTCAGGGAACTGGTAGAGAGGAAGGAAAGTTCGGTCATTCAC
GTGCCGTCGCCGTACCAGCGTGCAGACTTTCCTTACGAAGAGTTTGTCGA
AGGATGCATTCGAGTCTCACCGTGATTTTGTGATGAATTTGGCATGAACA
TTTTGTTGTTTTTCTGATAGGTTGTGTTTTGGTTTTGTTTTGCTTCTCGT
TTTGTTNCTGATAGGTTGTGTTTTGTTTTTGTTTTGCTTCTCGTTTTGTT
TCCCGTTTTCTTTCATTTCCCGCGCCAAGTATTTGTTACGAGCGATGCAG
CATTCATATTCCTTTGAATTGTTTTTCTCTCTCTTATGTTATTCTGGTAA
AGTCTTGGTGGCATATCGTCTGGGAAAGACGTCTTTTGGTTGAGATATCG
GGTGTTAGCGAGTTTTCAGTGAGAGAGTGTTGCGAGCAGGGGGGATGTTA
GATATACTCGCAGCAGTATCTGGTCGTGAGGATCCCAAGGGGATACATGT
TCGGAATTCTGTGTGTTGTAGACTAACGCCGGTGCAGTCACGGGGACCCT
TTTGGCGCGGTTGGTACGATGAGGCTTGCGCGTGTGCTGCGCACTTCNCT
TTCACGACAGCTCTCCGTCGTCCATTCACACCCAACCCGGGGCTCGCATT
CTGTCGCGGAATCAGCGGCGGATGAATGACCATCTCCGCGGGAATCCCAG
CCCTGGCCAGCACCTTCCACAGCAGCTCTCGATCCATCGAGTCATAAGCC
TTCTGCAGGTGCACCTACCCATGCGTGAAGGAGGACTGGGAACCACGAGC
AATGTCCTCATTCGATAGACGGCTTTTGTGGCAGGGCTAGCGCTGGTGTT
CTCCAACTCAGTGCAAGCAATGACAGGATACAAAGTTGAGCAATGTCTAC
CCCGGCTTGCCCAGCTACCGACAGGGTTGGCTCTGATTGACTCGCTGAAG
AAGCTAGAGGAAATCATCACCAAAGACAAGCTTGAAAAAGCTGTTGGGCA
GTCATGCAGTGGACTTGCGGGAAAAATGGGAACGTACCCAAAAATGAGAA
TTGGCGTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGCCATGCTCCACATCACGCCTTCTCACGGGCGCAAAAAGCGA
TTCGTGCTGGTTTCGACCTGATTTCTCGCGATGCTGGCTACCTCGGCGAT
GCCGAGGACATACAGCTTGAGCAACAGCTCATTCGAAAGCTGCTGTAATG
ACCTACAGCACTGTCAACTTTTATGGGGGGAGTTGCAAAGGCGTCGTTTG
CTTTCTAAAAACAAACGCCCATTCTCATTTTTGGGTACGTTCCCATTTTT
CCC
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protein sequence of EsuBft1178_5a-0001

>EsuBft1178_5 ID=EsuBft1178_5|Name=EsuBft1178_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=174bp
MDILGYARRTSHFGISFQRGTVEGFSLQVYADADFASKAADRRSVSGGIV
TCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQV
GMPCIPVFEDNQGAIQVAQNPISNSNSKHIDVRHHFLRELVERKESSVIH
VPSPYQRADFPYEEFVEGCIRVSP
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mRNA from alignment at Scaffold_68:135239..138410-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1178_5a-0001 ID=EsuBft1178_5a-0001|Name=EsuBft1178_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3172bp|location=Sequence derived from alignment at Scaffold_68:135239..138410- (Ectocarpus subulatus male Bft15b)
ATGGATATTTTAGGCTATGCGAGGAGGACGAGTCACTTTGGTATTTCGTT
TCAGAGAGGTACGGTAGAGGGGTTCAGCTTGCAGGTATACGCTGATGCGG
ACTTTGCAAGCAAGGCAGCAGACCGTAGGTCGGTATCAGGGGGGATCGTG
ACGTGTGGAGGAGGCGCTGTGTCTTGGTTTTCCAGAACGCAAAAGTGCGT
CACACTTTCGACGACAGAAGCAGAGTACGTCGCGCTAGGCGACGTAGTGA
AGGAGATTTTGTTTTTGAGGCAGATTTGGCGTTTCATGTTGCCGCAGGTC
GGCATGCCGTGCATCCCCGTCTTCGAGGACAACCAGGGGGCGATTCAAGT
AGCGCAGAACCCCATCTCAAACTCGAACTCGAAACACATTGATGTAAGGC
ACCATTTTCTCAGGGAACTGGTAGAGAGGAAGGAAAGTTCGGTCATTCAC
GTGCCGTCGCCGTACCAGCGTGCAGACTTTCCTTACGAAGAGTTTGTCGA
AGGATGCATTCGAGTCTCACCGTGATTTTGTGATGAATTTGGCATGAACA
TTTTGTTGTTTTTCTGATAGGTTGTGTTTTGGTTTTGTTTTGCTTCTCGT
TTTGTTNCTGATAGGTTGTGTTTTGTTTTTGTTTTGCTTCTCGTTTTGTT
TCCCGTTTTCTTTCATTTCCCGCGCCAAGTATTTGTTACGAGCGATGCAG
CATTCATATTCCTTTGAATTGTTTTTCTCTCTCTTATGTTATTCTGGTAA
AGTCTTGGTGGCATATCGTCTGGGAAAGACGTCTTTTGGTTGAGATATCG
GGTGTTAGCGAGTTTTCAGTGAGAGAGTGTTGCGAGCAGGGGGGATGTTA
GATATACTCGCAGCAGTATCTGGTCGTGAGGATCCCAAGGGGATACATGT
TCGGAATTCTGTGTGTTGTAGACTAACGCCGGTGCAGTCACGGGGACCCT
TTTGGCGCGGTTGGTACGATGAGGCTTGCGCGTGTGCTGCGCACTTCNCT
TTCACGACAGCTCTCCGTCGTCCATTCACACCCAACCCGGGGCTCGCATT
CTGTCGCGGAATCAGCGGCGGATGAATGACCATCTCCGCGGGAATCCCAG
CCCTGGCCAGCACCTTCCACAGCAGCTCTCGATCCATCGAGTCATAAGCC
TTCTGCAGGTATATGAAGCACATGTAGAGCGGAATATTTTCCTCGCCGCC
CTTGCTCCTGGAGTCGACGCATGAAAAACAGCATGCCGACGATGGATCGC
CAAGGTCGGAATCCGAATTGCTCCTTGGGTATGATGTTTATTTCGCCAAT
TTTTCCTGCCCTTTTCGTTCAAGGCGGTACTTCGCATTGAGCACGCTTTG
GTCTGGTACTACACAAAGCGCACACACAGCACACCCACCCCGGTGCCGAA
CGCAGATAACACCAGAACTCTACCGCGGCGCTTCTCTCTGGTGGTGCGAC
TGAAGGAGAAGGGACGAAAGAAATATGTGGTGAGCTGCCCAACCATGATT
GTACAGCCCCGGCAGCAGACCGCTTTGTTACCATAATTACATCCGACTTG
ATGCGACAAACGTGTTCCGTCTCTAACGAACGACACGGGTAATTTCTCGC
CCCTTTCTGGCGACGTTTCGCGGACACCATGGGAGCCGGTGGTGATCGTC
TCCAGCAGCAGCAGGCTATCGATGACGTGAGCGGTATGCAAACTTGCATA
CAGCCTACAATCTGCTGTACGTACGTAGACTACAATAGTTTGATGCCATC
ACACACCAAACCCGGGCCGTATCCAACGCGGGCCGTGGCCCACATTTGTG
CATTGGGCAGCAGTCGTTCCTTGTGAGGAGCTGTGGCGAGATGTTGCTGG
ATGTCTCTCTCTAGCCCGACAACAACATCTTGTAGGAGCCTGTTTCTCGA
ACCACTGTCTCCAGAAGCGTGGACCGGAGCTGCGCCATCAACCTTCAATC
CACCATGGTGGATTTTAATACACACACAGAAAGCTACCCGTTAGAGATAG
TCTAGACGATACCCACATTCAAACGGCGTCTCTCCCAACAAGGGATTGAG
CTCAGTCTCCCGAATTCCAAAGCGCTTTCCCGGAGGGTCTTTGCATGTCC
TCTTTCACAGACGACGAACAGCAACAGTTGACGAAAATTGGTCTGTCAGT
TGCTGAAGGTGGCATGCCAGTAGTCGGGATCCCAGTAGGGACAGAAGAGT
TCCAGAGGAATTTCATTTCCAAATTCGCCCGTGGTGACCCGGCGGAATTG
ATACGCCGCCTAAGAAACGCTTGACGACCCTCAAGCCAGCTATCAACTGC
TACGTTTATCTGGTGCGCCACGTTTGTTTCATCTGCTGAGGACGATTGCA
CCGTCTATCACCAACTCTGCCGCAAAAATACATGACAACATGATGATGTG
GGCAATGAGTAAGATCGTCCTTGGCAAGATGGCCGACAGCATGAGAATAC
CAACGGTCAAAGAAGTACGCGCAGACCCGACGAAGAGCGAGGAGGTAGAT
TTCTTCAAAGGAACAGCTCGGGCGCAGGTGCACCTACCCATGCGTGAAGG
AGGACTGGGAACCACGAGCAATGTCCTCATTCGATAGACGGCTTTTGTGG
CAGGGCTAGCGCTGGTGTTCTCCAACTCAGTGCAAGCAATGACAGGATAC
AAAGTTGAGCAATGTCTACCCCGGCTTGCCCAGCTACCGACAGGGTTGGC
TCTGATTGACTCGCTGAAGAAGCTAGAGGAAATCATCACCAAAGACAAGC
TTGAAAAAGCTGTTGGGCAGTCATGCAGTGGACTTGCGGGAAAAATGGGA
ACGTACCCAAAAATGAGAATTGGCGTTTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGCCATGCTCCACATCACGCCTTC
TCACGGGCGCAAAAAGCGATTCGTGCTGGTTTCGACCTGATTTCTCGCGA
TGCTGGCTACCTCGGCGATGCCGAGGACATACAGCTTGAGCAACAGCTCA
TTCGAAAGCTGCTGTAATGACCTACAGCACTGTCAACTTTTATGGGGGGA
GTTGCAAAGGCGTCGTTTGCTTTCTAAAAACAAACGCCCATTCTCATTTT
TGGGTACGTTCCCATTTTTCCC
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Coding sequence (CDS) from alignment at Scaffold_68:135239..138410-

>EsuBft1178_5a-0001 ID=EsuBft1178_5a-0001|Name=EsuBft1178_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=525bp|location=Sequence derived from alignment at Scaffold_68:135239..138410- (Ectocarpus subulatus male Bft15b)
ATGGATATTTTAGGCTATGCGAGGAGGACGAGTCACTTTGGTATTTCGTT
TCAGAGAGGTACGGTAGAGGGGTTCAGCTTGCAGGTATACGCTGATGCGG
ACTTTGCAAGCAAGGCAGCAGACCGTAGGTCGGTATCAGGGGGGATCGTG
ACGTGTGGAGGAGGCGCTGTGTCTTGGTTTTCCAGAACGCAAAAGTGCGT
CACACTTTCGACGACAGAAGCAGAGTACGTCGCGCTAGGCGACGTAGTGA
AGGAGATTTTGTTTTTGAGGCAGATTTGGCGTTTCATGTTGCCGCAGGTC
GGCATGCCGTGCATCCCCGTCTTCGAGGACAACCAGGGGGCGATTCAAGT
AGCGCAGAACCCCATCTCAAACTCGAACTCGAAACACATTGATGTAAGGC
ACCATTTTCTCAGGGAACTGGTAGAGAGGAAGGAAAGTTCGGTCATTCAC
GTGCCGTCGCCGTACCAGCGTGCAGACTTTCCTTACGAAGAGTTTGTCGA
AGGATGCATTCGAGTCTCACCGTGA
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