Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2314_2 |
| Protein domains | TMhelix |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | TRANSMEMBRANE |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 35 |
| Hectar predicted targeting category | signal anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2314_2a-0001 ID=EsuBft2314_2a-0001|Name=EsuBft2314_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=351bp|location=Sequence derived from alignment at Scaffold_68:101229..101863- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTCGAAAGGGGCGGTGTTGCCGCCGCACAGAAAGCGCTGACAGAAAAGGA
GCATGAGTTGGTCGAAAGTAAACAGCGCGAGGCGGCAAGCACCGCTGAGT
GCAGCATGGCTCAGGAGCTCGCGCGCGAGAGCACCGAGGCGCTAAAGGAG
GAGAAGGCTAAGAGAGCAGAGGCAGAGCGGTTGCGGACGGCGCTAGGGTG
TTTTTTGGTTCTGGCGGGGTTCTTCGGAGCGTTCGATTTGATTTTATTGG
CTCGAGCGATTTTCCATCTGGAAGATCCAGGACACTTGTCGAAAATTTTT
CCTGTAGGAAATTTGACCGATTGGCACCCCTCCGTGGCATGTGTGCCATA
G back to topprotein sequence of EsuBft2314_2a-0001 >EsuBft2314_2 ID=EsuBft2314_2|Name=EsuBft2314_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=81bp
MAQELARESTEALKEEKAKRAEAERLRTALGCFLVLAGFFGAFDLILLAR
AIFHLEDPGHLSKIFPVGNLTDWHPSVACVP back to topmRNA from alignment at Scaffold_68:101229..101863- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2314_2a-0001 ID=EsuBft2314_2a-0001|Name=EsuBft2314_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=635bp|location=Sequence derived from alignment at Scaffold_68:101229..101863- (Ectocarpus subulatus male Bft15b)
GTCGAAAGGGGCGGTGTTGCCGCCGCACAGAAAGCGCTGACAGAAAAGGA
GCATGAGTTGGTCGAAAGTAAACAGCGCGAGGCGGCAAGCACCGCTGAGT
GCAGCATGGCTCAGGAGCTCGCGCGCGAGAGCACCGAGGCGCTAAAGGAG
GAGAAGGCTAAGAGAGCAGAGGCAGAGCGGTCGCAGCAAGAGGCAGAGCG
GAGGAAGCAAGAGGCTGAACGAGACAAGGCGAAGGCGGAGGCGGTGGGCG
TAGATGATGGGTGCTTCCTCGCTGCTGCTGTTTTTTTCGCCAGCAGCAGG
AGGAGCACTGCTTCCTCCAGCAGGAGTCCGCGCGGTCCCACCGCCCGGCG
GCTGTTCGAGTGAGCCACCAGGCATGTTTGCTAGGTTGCGGACGGCGCTA
GGGTGCCGCTAGGGTGCCGTGTGCAACCTCCACGGCACGGCGGAACGCGT
TCACACACGCTTCGCGGTCGCGGGGCGTCAGGTGTTTTTTGGTTCTGGCG
GGGTTCTTCGGAGCGTTCGATTTGATTTTATTGGCTCGAGCGATTTTCCA
TCTGGAAGATCCAGGACACTTGTCGAAAATTTTTCCTGTAGGAAATTTGA
CCGATTGGCACCCCTCCGTGGCATGTGTGCCATAG back to topCoding sequence (CDS) from alignment at Scaffold_68:101229..101863- >EsuBft2314_2a-0001 ID=EsuBft2314_2a-0001|Name=EsuBft2314_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=246bp|location=Sequence derived from alignment at Scaffold_68:101229..101863- (Ectocarpus subulatus male Bft15b)
ATGGCTCAGGAGCTCGCGCGCGAGAGCACCGAGGCGCTAAAGGAGGAGAA
GGCTAAGAGAGCAGAGGCAGAGCGGTTGCGGACGGCGCTAGGGTGTTTTT
TGGTTCTGGCGGGGTTCTTCGGAGCGTTCGATTTGATTTTATTGGCTCGA
GCGATTTTCCATCTGGAAGATCCAGGACACTTGTCGAAAATTTTTCCTGT
AGGAAATTTGACCGATTGGCACCCCTCCGTGGCATGTGTGCCATAG back to top
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