EsuBft1397_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1397_3a-0001
Unique NameEsuBft1397_3a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_68contigScaffold_68:13697..26385 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G180
ProteomeIdEsuBft1397_3
Protein domainsPTHR19959
Protein domainsSSF48452
Protein domainsIPR013026
Protein domainsPF13374
Protein domainsIPR019734
Protein domainsIPR002151
Protein domainsPF13424
Protein domainsIPR011990
Ownerapollo_admin@sb-roscoff.fr
Notenephrocystin-3 os:danio rerio gn:nphp3 pe:3 sv:1 [Automatic annotation]
Nb exon11
Max annot lvl2759|Eukaryota
Length2051
Hectar predicted targeting categoryother localisation
Evalue4.06e-19
EggNOG OGsCOG0457@1|root,KOG1840@2759|Eukaryota
Ec32 ortholog descriptionNB-ARC and TPR repeat-containing protein - likely pseudogene
Ec32 orthologEc-08_001220.3
Date last modified2016-06-13
Date creation2016-06-13
Descriptiondetermination of stomach left/right asymmetry
COG categoryC
Cross References
External references for this mRNA
DatabaseAccession
GO0031227
GO0051649
GO0044463
GO0003143
GO0030111
GO0005871
GO0007018
GO0003777
GO0001822
GO0060026
GO1902578
GO0016020
GO0005929
GO0016043
GO0061371
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1397_3aEsuBft1397_3aEctocarpus subulatus male Bft15bgeneScaffold_68 13697..26385 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1397_3a-0001-exonagat-exon-38102Ectocarpus subulatus male Bft15bexonScaffold_68 13697..13818 +
EsuBft1397_3a-0001-exonagat-exon-38101Ectocarpus subulatus male Bft15bexonScaffold_68 14027..14152 +
EsuBft1397_3a-0001-exonagat-exon-38097Ectocarpus subulatus male Bft15bexonScaffold_68 14378..14554 +
EsuBft1397_3a-0001-exonagat-exon-38098Ectocarpus subulatus male Bft15bexonScaffold_68 15016..15075 +
EsuBft1397_3a-0001-exonagat-exon-38093Ectocarpus subulatus male Bft15bexonScaffold_68 16512..16580 +
EsuBft1397_3a-0001-exonagat-exon-38096Ectocarpus subulatus male Bft15bexonScaffold_68 18617..18742 +
EsuBft1397_3a-0001-exonagat-exon-38094Ectocarpus subulatus male Bft15bexonScaffold_68 19156..19281 +
EsuBft1397_3a-0001-exonagat-exon-38095Ectocarpus subulatus male Bft15bexonScaffold_68 19785..19910 +
EsuBft1397_3a-0001-exonEsuBft1397_3a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_68 20199..20324 +
EsuBft1397_3a-0001-exonagat-exon-38100Ectocarpus subulatus male Bft15bexonScaffold_68 20686..20811 +
EsuBft1397_3a-0001-exonagat-exon-38099Ectocarpus subulatus male Bft15bexonScaffold_68 25519..26385 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1397_3a-0001-exonagat-five_prime_utr-2355Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_68 13697..13755 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1397_3a-0001-cdsEsuBft1397_3a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_68 13756..13818 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1397_3a-0001-exonagat-three_prime_utr-3572Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_68 25672..26385 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1397_3a-0001EsuBft1397_3Ectocarpus subulatus male Bft15bpolypeptideScaffold_68 13756..25671 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1397_3a-0001 ID=EsuBft1397_3a-0001|Name=EsuBft1397_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2051bp|location=Sequence derived from alignment at Scaffold_68:13697..26385+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CTTGGCGGGCTTGTTGCAGAGCCAGGTGACGGCAGTCAAAGTCGTCCACA
GTGGTTGGTATGTCTGACGTACAGTTGTGTGACCAACCCCTAGCATGGCG
AGCTTCGAGGGTGGGGTTTCAGGGCAAATACACTGAAGCTGGGCCGCTCT
ATGCGCGATGTCAGGCGATACAAGAGGCAGTTCTAGGCCCCGATCACCCA
CGCCTGGCCACAACGCTCGGTAACTGGGCAGCATTGTTGTACGAACAGGA
TGTTCCGACTTTCGCCATGACGTCATCCCGTCTTCCCGTCACGTTCCAGG
GCAAGCCTGAAGAGGCCGGGGCGTTGTTTAACCGTTCCCTTGCCATCCGC
GAGAAGGCTCTTGGACCTGATCACCCTGACGTGGCTACATCGCTCAACAA
CCTGTCATGCTTGTTAGAGAGCCAGGGCAAGTATGGGCAGGCCGGACCGT
TGTACGAACGTTCCCTTGCCATCCGCGAGAAAGCTGCTCTTGGACCTGAT
CACCCTGACGTGGCTACGTCGCTCAACAACCTGGCATGCTTGTTAGAGAG
CCAGGGCAAGTACGCTGAGGCTGAGTCGCTCTATGCGCGGTGTCAGGCGA
TAGAAGCAAAGGTTCTAGGCCCTGAACACCGACGCCTGGCCACAACGCTT
TACAACTGGGCGGCGCTGTTACACAAGCAGGGAAAATACGCTGAAGCTGA
GTCGGTCTATACGCGGTGTCAGGAGATAGAAGAGAAGGCTCTGGGCCCTG
AGCACCCAAGCCTGGCCACAACACTCAATAGCAGGGCGAAGTTGTTGACG
ACGCAGGGCAACTATACTGAGGCTGAGGCCCTCTATGCACAGTGTCAGGC
GATACAAGAGAAGATTCTGGGTCCTGAGCACCCAAGCCTGGCCACAACGC
TCGACAAATTGGCAGTAGCGTTGTACAAGCAGGGCAAGTTTGGGCAGGCC
AGGCCGTTGTTTGAACGTTCCCTTGCCATCGTGGAAAAAGTTCGAGGATC
TGATCACCCTGACGTGTGGTCATTGCTCGGCAATTGGGCGTGCTTGTTGA
AGAGCCAGGGCCAATTCGCTGAGGCTGAGCCGCTATATGCGCGGTGTCAG
GCGATAGAAGAGAAGGTTCGAGGTCCTGAGCACCCAAGCCTGGCTACGAC
CCTCAACAACCGGGCGAGCGTGTTGTTTAGCCAGGGCAAGAATGAGGAAG
CCGCGCCGCTGTTGGAACGCTCCCTTGCCGTCACCGAGAAAGCGTTAGGA
CCTGATCACCCTGATGTGGCAACAATACGCAACAACTTGGTCAATTTGTC
GCAGAAGCAGGAAAGAGCCGTGGGCACCATCCATTAAGACTCCTTGGGTT
CCCTATCGAGTCATACGGTCTGTTCCTGGTGATGATAAGTTGTACGGGAG
GAGCTTAAAGCTGACGCAGTTGTGCCTAGATGACCGCTAGTCACCGACTC
GTCACGGTTATAAAAGAACAAACCGCCTGTCGACCCTGTCCGCAGATTTC
TGCGAAGGACTACAGGAGAGAAAGAGATTGGAGTGACGTCCGACATGAGC
TAGCGAAGCACGTTGTCTGTGCAGTGTTTTACGCGATCACGAGGCAATCT
TAAGCAGAGTGTCGCACAGCCAGTGTGCCACATGCAGTCCAGTCAGGGGT
AACACCAACACGAAGCCAGCTCATCATTGGTTCAAAAGGGGTGCAGTCCA
CCTCGGGTATTTCGATTCCGCAAGAATCAATGCAGGTTGCCATTTTTCTG
TACCGAAGTTCTGCTTTTCCGGGCCGAACAGCCTCATCATCGTGGTTTAC
CCTGTTGACCAATCACCATATTTTGCTGCCCAGTACCCCCTGCCAACCTA
GGTTGCAAGGCCTCTATTCGGGTGACAATTTGAAGTGCTACAACAGGCCC
TGAGTAGTGGTCCACGGTGGGGGGGAAGCCGTCTTTGGATATCTGCATTT
CTAAGATATCGTAGATTGGGTTTCTGGCTGGCTGGGATACCTTTTTTGCA
GGAGAGAGGGAGAGAAAGATATAGAGAGGGAGAGAGAGACTGACGGGGGG
G
back to top

protein sequence of EsuBft1397_3a-0001

>EsuBft1397_3 ID=EsuBft1397_3|Name=EsuBft1397_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=425bp
MSDVQLCDQPLAWRASRVGFQGKYTEAGPLYARCQAIQEAVLGPDHPRLA
TTLGNWAALLYEQDVPTFAMTSSRLPVTFQGKPEEAGALFNRSLAIREKA
LGPDHPDVATSLNNLSCLLESQGKYGQAGPLYERSLAIREKAALGPDHPD
VATSLNNLACLLESQGKYAEAESLYARCQAIEAKVLGPEHRRLATTLYNW
AALLHKQGKYAEAESVYTRCQEIEEKALGPEHPSLATTLNSRAKLLTTQG
NYTEAEALYAQCQAIQEKILGPEHPSLATTLDKLAVALYKQGKFGQARPL
FERSLAIVEKVRGSDHPDVWSLLGNWACLLKSQGQFAEAEPLYARCQAIE
EKVRGPEHPSLATTLNNRASVLFSQGKNEEAAPLLERSLAVTEKALGPDH
PDVATIRNNLVNLSQKQERAVGTIH
back to top

mRNA from alignment at Scaffold_68:13697..26385+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1397_3a-0001 ID=EsuBft1397_3a-0001|Name=EsuBft1397_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=12689bp|location=Sequence derived from alignment at Scaffold_68:13697..26385+ (Ectocarpus subulatus male Bft15b)
CTTGGCGGGCTTGTTGCAGAGCCAGGTGACGGCAGTCAAAGTCGTCCACA GTGGTTGGTATGTCTGACGTACAGTTGTGTGACCAACCCCTAGCATGGCG AGCTTCGAGGGTGGGGTTTCAGGTAGGTATCTGACATACGTATCATCGCC TGAAGGAGGCACTTCTGGTGATTTCCCTCTTCCGTTGTTTGAAATTGATA CACGAACATGTGTAGGGATCTTCTCAGAGCCGCCTTTTTCGTTGAACTGG TTTAGTTGGTTTTGGTCGACCACCGACGCACGACATCCGACCGAAATACG CCTCTGCCGCGCTGTTGCACCGCACCTCAGGGCAAATACACTGAAGCTGG GCCGCTCTATGCGCGATGTCAGGCGATACAAGAGGCAGTTCTAGGCCCCG ATCACCCACGCCTGGCCACAACGCTCGGTAACTGGGCAGCATTGTTGTAC GAACAGGTATCGAACAACGACACTTTTCTCCCTTAGAACCATTCGTGTAG ATTTAAGCGCTTGTTCGGGTTGGTTAGCAGACCGCTGGCTCATATCCTGC CGCTTTCTACACACATAACCGTAACGAAGATTTCGATCGTAATTCGGTGG AAGTGTAAGGTATTGGGCCCTGACCGCCCCGGTTGACCGCTACTCCTGAA ACGTTGTTCAGCGCTTGTTCCTCCGCGGTAGGATGTTCCGACTTTCGCCA TGACGTCATCCCGTCTTCCCGTCACGTTCCAGGGCAAGCCTGAAGAGGCC GGGGCGTTGTTTAACCGTTCCCTTGCCATCCGCGAGAAGGCTCTTGGACC TGATCACCCTGACGTGGCTACATCGCTCAACAACCTGTCATGCTTGTTAG AGAGCCAGGTAAGAGCGGTGGAAGTTGTCCACGAGTCGGGAGATTTTTAT GGCTCTCCCTGTGATGAGATGATTTGGCTGCCCCAAGCAATACAAACACC CTGAATGTGGTGGTTTGGCACGCGTCTCGCGTCGTATCATCGCCTGAAGG AAGCACTTCGAGGTGGGTTCTTTATTTATTATCTTGAACTCGGAGACAGA CGTTTCCAGGAGCCTCTTAGCGCCGTTATGTGATTGCGTTACTTGGAAAG TTCTAGCTGGGCCGGTCCCTCAAAAGCCTCTGCTGCGTGCTACACGTGTT TTGTACGAAGCGGCGGATCCGCTGTACCTTCGAGTCTCTCAAGATCGGGA AGAAAACTCTTGAACCCGACTTGCAGGAAGTTCGGCAAACTTGTCGATCA TGTGTTTCACCGCCGTGGGATCTACCGTCCTGTATCATGACACGTCCCCG TCTCTCCCTCACATTTCAGGGCAAGTATGGGCAGGCCGGACCGTTGTACG AACGTTCCCTTGCCATCCGCGAGAAAGCTGTTGGACCTGATCATCCCGAC GTGGCCGCAACGCTCATCAACCTGGCGGAATCGTTTCAGAGAGAGGTGAG GGCGGTCAAAATCGTTCACGAAACCGAGCGGTATGTATGACCCTCACTCT GGTGAGGGGGTTAACTGCTTCAAGCACGACACTCTTTGCACTGCAATCAT CTGGCTTACCTTTGATGGCTTGAATGAAGCACCTTCAGTGATTTCTCTCT TCATCACTTTGAATTCGTAGACAGGCTTTCAGCGACGCCCTCAAAAGACG CTGCTGCTTGGGAGGCTTCGTCAGCATTGTTGGTCTGGTTCTTATCCGCC TGGGACCTCAAAAAATCAATCCCGTCTCTCCCCNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNCCCCCCCCCCCCCCTCCCCGTCTCTCCCTCACAC TCCAGGGCAAGAATGAGGAAGCCGCGCCGCTGTTGGAACGCTCTCTTGCC ATCACCGAGCAAGCTCTAGGACCTCACCACCCTGACGTGGCCGTAGTGCT CAACAACTGGGGGGGAGTGTTGGAGAACCAGGTGAGAGCGTCTATTGCCG TATACGAAACGGGCGGGACTCTCCTTTGTGTTGTTTTACTGGCCCAAGCA TCGTCTTAGAGGAAGTAGGGTTTTTTGGCACGCATCTGGCTGACGTTTCA TCGCCTGAAGGAGGCACTCCTAGTGATTTCCCTTTTGAATGTTTGAAACT CGCATATTGAAACGTGCAGGGATCTTATCAGGGCCGTCACGTGATTGAGG TGTTGAAGTGTTTCGTACAACCATTTTTGATCGACTTCCTTGGTGGTTCG ATCTAGATCTGACCTCGGCTGCAATACGCCTCTGCCGCCCTTTTTCGCTG CACACTAGGGCAAGCCTGAGGAGGCCGAGGCGTTGTTTGAGCGTTCTCTT CTCATCCGCGAGAAGGCTCTTGGACCTGATCACCCTGACGTGGCTACGTC GCTCAACAACCTGGCATGCTTGTTAGAGAGCCAGGTAAGAGCGGTCAAAG TTGTCCACGAATCGGGAGATGTTCATGCCTCTCCCGGTGGTGAGATGATT TGGCTTCCCCAAGCAATACAAACACCTGAATGTGGTGGTTTAGCACGCGT CTCGCGTCGTATCATCGCCTGAAGGAAGCACTTCGAGGCGGGTTCTTTTT TTATTGTTTTAAACTCGCAGACAGGCATGTCCAGGAGCCTCAGCGCCGTC ATGTGATTGCGTTACTTGCAAAGTTCTAGCTGGGCCGCTCCCTCAAAAGC CCCTGCTGCTTGCTACACGTTCAGTAGAGGTCCCTGTTGAGTGCCGGGGT GTGCACCGAGATTTCACCGGCGCTAAACCGGACCGGCACTATTCAGAATA TTGAAAATGGCTTTGAAATTCAGTGTGTGTGCCCGCCGAAAACACCGGCA ATAGACCAGCGACCGATACTATATTCAACCGGCACCAAACAGCGACCTCT ACTGTGTCAAGTACGAAAAGGCGTATCCGCTGTACCTTCGAGCCTTTCAG GATCAGGAAGAAGACTCTTGACCCCGACTTGCAGAAGGTTCGGCAACCTC GTCGACCATGTGCTTAACCGCCGTGGGATCTACCGTCCTGTTCCATGTCA CATTCCCGTCTCTCCCGCACATCTCAGGACAAACACGAGGAGGCTGGATC GTTGCACGAGCGTTCCCTTGCCATCCGCGAGAAGGTTCTTGGACCTGATC ACCCCGACGTAGCCGAATCGCTCAACAACCTGGCATGCTTGTTCGAGAGC CAGGTGAGGGCGGACAAGCCCGTTCACGAAACCGAGCGGTATGTATGACC CTCATTCTGGGTGGGTGGTTTGCCGGCCCAAGCCTGACACCAGGCACTTG GAGTGATTTCGCTCCTGGTTGTTTAAAACTTGTGAAAAAATGAGTAGAAA TCTGATCAGAACGGGTATTTGGTTGAATTGGTACAAATGTTTTTCATCGA CCACTGCCTCACGTCAGCCGGGCGTGGTTTCTGTCATCGTTCCCCCCCGC TGTTCGAGCTGTGCTGATTTGACCTCGACTGAAATACGCTCCTCTTGTAT GTTCGCCTCTTCCGCTCTGCCCCACTACATTTTAGGGCAAGTACGCCGAG GCTGAGCCTCTCTATGCACGGTGTCAGGCGCTAGAAGAGAAGGTTCTAGG TCCTGAGCACCCAAGCCTGGCCACGACACTCCATAACATGGCGGGCTTGT TGCAGAGACTGGTGAGAGTGGTCAAAACCGGTCACGAAATGGGAGAGTGG CGGTTTTGCTGAGGACATAGGTGCCTTTTCGTGTACGTACGTATGTATTT TTGGTGGGGTGTTTGGGGGACCGCTGGCACATATTATCCCGCTGTATGGT CTGCCATACACGAGGCAGGTACGACAACGCCGACTTATTTGGCCTGAGAG CTTTGAGATTTGGTCGAAGATGGTGGACCCTGCGTTTGCAGAAGTTCCAC CAATCCTGTTGAGCAATCGTTCCTCCGCTGTACATCTGCAATCCTCAACC TAACCTTGACCAATATTCCTCTCTTCCCCCTCACATTTCAGGACAAACAT GAGGAGGCCGTGTCGTTGTACGAACGTTCCCTTGCCATCGTGGAGAAAGC CTTTGGTCCTGATCACCTAAACGTAGCCACATCGCTCAACAACCTGGCGG GCTTGTTGAATAGCCAGGTGAGAGTGGTCAACACCGTTGATGGAGCGGGA GGCATGCGTGATTCACATTTGTGTGTTGTGGTTGCCGCATCAGGCAAAAT TAGTTTTTTTAGGCGGGGCTTCAGATATCTGGCTTGAGTATCACCGCCTG ATGGAGGCACTTTTCATGTGTTACCTCTTGATCGTCTGAACCTTGTAAAC CGAAATGCGGAGAAACACTATCAGGGCGGCAATTTGGTTGAATTGATCCA GTCATTTTTAATCGAGCGCCTCCCATCAACCGGTAGCTGAAAGCATGTTC CCCATCACTTTGATCATCACCCGACCTCTACTGCAATACGTCTCTGCTGC GCTGTCCCACTGCACTGAAGGGCAAGTACGCTGAGGCTGAGTCGCTCTAT GCGCGGTGTCAGGCGATAGAAGCAAAGGTTCTAGGCCCTGAACACCGACG CCTGGCCACAACGCTTTACAACTGGGCGGCGCTGTTACACAAGCAGGTAC ATACGAGCGATAAGCTTTCCCGCGAAACTCGTTGCCAGGCAATGCGAATG CGCAGTGCTTTAGCGGCGGGCGAATCCGTTGAGAAAATTGAAATAAGATT TTTTGGACAAAATGCGAGTGCGTGTTTTACTTCGATTGTTCGTAACTCCA CACCAAGATTTTTTTGTCTTCTTCGGTGGTTTTGGTCTTGGATGTGTGAT ATCACCGCCCAGACACGTGTTTGAGCTTCCTGGAGCCGCCATTTTTGGTT GGTGGGTTCGTTGAAATGCTCGGCTCAAGCGTTCTTTATTGACCACTGCC TTACGATAACCTGGCGAGGTAGCTTATCACATGCTCCCGAGCGCAGTTCG ATCTAGAGTCAAGCTCGCCTGAAGTACCCCCTGTGCCACGCTGTCCCTCT GAAATGAAGGGAAAATACGCTGAAGCTGAGTCGGTCTATACGCGGTGTCA GGAGATAGAAGAGAAGGCTCTGGGCCCTGAGCACCCAAGCCTGGCCACAA CACTCAATAGCAGGGCGAAGTTGTTGACGACGCAGGTGAGAGCATTGAGT GGTACATATCATAGACATACAAGTGCTTGAAGACCGGTTGAGTATTTACT CCTTCCGAAACCTTTTGTACTAGCCGTGAGTACACCCCTGTCGGGTTTCC TGCTTGAATCCCAGAGGATGGTGTCGAGGCTGACCTTTTCTGCCTTTTGA GCCGCTGGCATTTGGATAGATTACGCTCGATCCTGAACGCCCGAAGGTGC CCTTGGGATTCAAGAATATGGCATGGTGGTGGAGCGGTTGTTCCTCTGTT TTTGCTCTCTTGATCGCCCTCCTGCTTCGTTTTCTTCGCCACCTTCCAGG GCAAGTATGAGGACGTCGGGCCGTTGTACGAACGTTCCCTTACCATCCGC GAGTTACTCTTGGCCCTGATCACCCTGACGTGGCCTCACCTGGCGCGGAA GCTGATAGCATATTCCCCAGCATCCGATCTTGACCCGACATCAACTGAAT AATTTACACCTCTGCCGCGCTGCCCCATGGCACTTCAGGGCAACTATACT GAGGCTGAGGCCCTCTATGCACAGTGTCAGGCGATACAAGAGAAGATTCT GGGTCCTGAGCACCCAAGCCTGGCCACAACGCTCGACAAATTGGCAGTAG CGTTGTACAAGCAGGTAAGATCGGTCACAAATTCCCCTGTAGTAGTATCA CTCCTGTAGAATTGCGCATGTTCGGGTTTCTTAGCAGCGTGCTGTCTATC ATCCCGCTGTTTCCTACCACACACAACAGAAACGAAGATGTCGATCCTAT GCATATTTGCGAAGACGGCAGAAGTAGAAGATGCTGGCCCGCCCCGGTTG ACAACAGCCCTAGCGACCCTGTTCAGCACTGTTCATCGGCAGTAGGTAGG ATGTACGATTCTCTACCCAAAACATTTGTCCTGTGATTCCGTGACATTTC AGGGCAAGTTTGGGCAGGCCAGGCCGTTGTTTGAACGTTCCCTTGCCATC GTGGAAAAAGTTCGAGGATCTGATCACCCTGACGTGTGGTCATTGCTCGG CAATTGGGCGTGCTTGTTGAAGAGCCAGGTGAGAGCGGTCCAAACCGTTC ACGAGACATGAAGGACCCAGGGTTACACGTATGTTATTTGGTGTGGTTGG CTGCCCCAAGCAGAATACGCTTGGATTTTTGGGTGTCATGCTGGTATCTG GCTTACGCATCACCTCTAGAGGTGCTTTGAGCGACCTCTTGATTATTTGA AACTCGTAAACCGAAATGTGGCGGGATCGTCTCGGGGGCACCGGATGGGT AAAGTTGCTTCAAGCGATTACGATCGACCACTGCCTCACGGCAATTGGGC TGGTAGCTGATATGCTGTTCCCATGCAATTCGATCTAGATCTAACCTCGA CTGAAGTGCGTCTCTGCCGCGCTGCCCCACTGCACTTAGGGCCAATTCGC TGAGGCTGAGCCGCTATATGCGCGGTGTCAGGCGATAGAAGAGAAGGTTC GAGGTCCTGAGCACCCAAGCCTGGCTACGACCCTCAACAACCGGGCGAGC GTGTTGTTTAGCCAGGTACATGTTCGAATTTTCCGAGAAATCTCTTGACG TGCTCGGCGGATTTGCTGAGAATACAGACGAGGAAATATCATATTTTTTC TGACCTGATGTTTGGCCGTGTTTGATGTCGTGTATTCCTCCGCAGTAGCC CGGACCCCGCCTCACTCGCCATGCGCTTTTCCCCATATTCCAGGGCAAGA GTAAGGAAGCCGCGCCGCTGGTGGAACGCTCGCTTGCCATCCGCAAGAAA GCTCTTGGACCTGAACACCCTGACCTAGCCACACCGCTCAAAGACCTTGC GGTCTTGTTGGATAGCCAGGTGAGAGCGTTTAGTACCGTTCACGGAACGG GAGGAATGCACGTCTCAAACCCCAAGCATCGGTTTTGTGGACGTGGAGGT TTTGGTGGTGTCTGGCTTACATTTCATCGCCTGAAAGACGCACTCACTTG TAGTGATTCCCCTCTTGGCTCGTTGAAACGCGTTAATCGAAACGTGCAAG GGATCTTGTCAGGGCCACCATTTGGTTGAGCTGGCGCAATTGTTTTCGTC GACCACTGGCTTACGTTGACCTGGCGTGATAGCTGGTAGCATGTTCCCCA TCAGGTCGATCTACTTTTTCCCTCGACTGAGGTGCAAGCCTCTTCCCCGC TGCCCCGCTGCATATTAGGGCAATGACGCTGAGGCTGAGCTGCTCTATGC GCGGTGTCAGGCGATAGAAGAGAAGGTTCTAGGCCCTGAGCACTCAAGCC TGGCCACAACGCTCAACAACCGGGCGAATTTGCTACACAAGCAGGTGAGA TAATGTTTTCAGGGTAAATAATGTCTAGACTATGTTACTTGCACTGTGTT TCGTGGGGTTCTTGTGGTGGACCGCTGGGATAACGATTCCGCTGCCTTGG CCTGCGAAAGGCAAGGCGGGCACGATAACCCCCACTCGTTTGGCCTGAGA GCGTTTGAGATTTGGTCGAGAAGCTGGGCCCTGACCACCTCCGTTTGCAA AAACTCCGGCGATCCTGTTCATCATGTGTTCCTCCGCAGTTGTTAATGTT TTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTGATGTCGCAGCAATAATCCGGTCACCATA ACGTACCTTCGAATGTCCGAATCTTTTTCCGTGGTCACGGGCTACCCATC AGGGTACTCAAAAAAATGCAAATATATATAAGCGAAATAGTTATCAAACA TACACTCACGTTTGTGTCGCAGCTTCACCTGGTGCATAATCACTTGCATA TGGACTGGGCAAAGCATCCACGGCCACATCTGTACTTGCCCAGGTTTCCG TCGGCCATTCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCCCCCC CCCCCGCTCTTGGCTCTTCATGAAAAGTCAAGGCAGCAGTTGGGGGGAAA ACTATGACAATACAAACAACGTGTGAACACACAAGACGAAGGCGAGACGA ACAATACAAGGCAGGAGGCGGCGGAATGTGTGTGTGGTAGAACAGCTGAC GCCGCAGACACATTACATTTTCCTTTATGTTGAGGTAACACCGACGCAAG AGGCATGGACCAGGAATGTCCCCCCTCCTCCGAATTCTTTCCTCCATATC CTTTTGCGGTGGTTTTATTTGGTTCCCGATCTCTCGAAATCTGTCAAAGT CGGCTGTCCTCGTTTTCTTTTTCTCGCGGGCCTCCTCTTTTTCTCGTGCC ACGCCGCCATGAACCTCTCCCCTCCCTTCTTCACCCCCGTGTATCATGCC GCCCCACCATCCTTCCGGGCAGCTAGCAGACGGCGTGATCGACTTCGAAA GTCAACCGCACATCGTCTGTTGAGCCAGCAGTGGCCTCCAGCGCCTTACC ATTGTCCGCCAGTGACTTCCCCCAGGGCTGCGCCCGTCGGCCTGGACGCG GCTTCTCCTCCCCCACTTTTGCCCCGAACATCAGACGTTTTGGAAGTTTC CCGTGTGCCTGTCTCGCCATACCTGCCGCGAACAGGAGTTGCCGCTGGCG GGTGATCGCCTCCACACTCTGGCTTTAGGTCAGCTTCAAGGCTTTGCCAT ACGACAGCTGCCGATATGTGCCTTGGACGCGGCGGTACCCGATGACTCGC AGGAAGAGTACGTAGTTTGTTTTTCTCAACTCCCCGATGTGGTCGATGCG TGGTGCCGGCGTCATGCATCCGCGCATCCGTAAAGCAGAGCCTCCACCGC TTCCGCGTTCAGCAGGCGCACCAGGGTACTGTTCATCGGTTGAACAGCTA ACGGAAGAGCTGCTTGACGCCCCCCCACGCAGCTTCGGTCCTGCGGCGAA TCTTGGGCATGAGCTCGCGTCTTTGGTGATCAGGCCGCCCACATATATCG GAACTCAGTTGGTTAGAGAGTACGTTTTGACCTGCTGCATAGTCTACCTA TCATTGGCGGACGGGGCGGCGGCGGCGGTGGCGATGGCTACCCCACTGCA ACCGGTATGATCCACTAAGCCTGTTTATCCCTCTCTTGCCCTCTTGCCCT GATTTCAGGGCAATAATGAGGAGGCCGGGCCATTGTACGAACGTTCCCTT GCCATCGTGGAGAAAGCTTTAGGTCCTGACCACCCTCACGTAGCCACAGC GCTCAAGAACCTGGGGGGCTTGTTGGAGAGTCAGGTGAGAGCGGTTAAAC CCGTCCATGAACGAGAGGCATATATGACTCTCATTTATATTGTGCAGGTT GGCCGCCCCGAGCAGAATAAGCTTGTACTGGGGCGGGTTCAAGCAGATAT CTAGCCTGAGTATTCCCTCTTGATGGAGGCATTTCCAGTGATTTTCCTCT TGATTTTTTGAAATTGGAAATCGAAATACGGAGGAACGTGATCAGGGCCG CCAATGGCCATTTGGTCGAGTTGGCTGAAGTGTTTCGTGCAAGTGTTTGC GATCGACCACCGTCTCATGTCAACCGGGCGTGTTAGCTGAAAGCGTGCTC CTCGGCGAATCGATGTTGATCCGACCTCGACCTCGACTGTAATACGCCCC TGTTGCGCTGTATCGTTGACCTTTAGGGCCAGTACGCTGAGGCTGAGCCG TTCTATGCGCGGTGTCAGCTGATAGAAGAGAAAGTTCTAGGCCCTGAGCA CCTAAGCCTGGCGTTGACGCTCCACAACCGGGCGGCGCTGTTACACAATC AGGTTTGTGGGAGTGATACGAATTTCCTTGAAACTTCTTGCCGTGCTCTG CCGGTGCGTGGTGGTTACCGCGCGGGCGAATTTACCAATAGTGGAGGTGA GAGAAATCAGATTGTTCGACCATTCGGGCGTGTATGTTGCGTGTTCGTTC CTCCGCACTAGCCCTGACTCCGCCTCGCTCGCCATGCGCTTTCCCCCGAT ATTCCAGGGCAAGAGTAAGGAAGCTGCGCCGCTGCTGGAGCGCTCTCTTG CCATCCGCGAAAGAGCTCTCGGACCTGACCACCCTGACGTGGCCTTAGTG CTGAACAACCTGGCGGGCTTGTTGAAGAGCGAGGTGAGAGCGTTCAAAAC GGTTCACGCCACGGGAGACATGTACGACTGAAAACTCACGAGATGTTTTG ACCGCCCCAATCATCGTCTGAGAAGACAAGGGTACACATGAAAAAAATCC GGACACGTTGGCCACCCCCCCACGCTCCCCCCCCCCGGGGAGGGCAATTT CGATTTAGATTTTACATAGTATTAGTATGAGGAACTTCGTTCACAATGAG CCATTGCCCTCACTACTGCAGAGGGGTTTTATCCACGGTGCTCCTTTCGA AATTATTAGGAAATTAGAGCCCCCCGCCCCCCCGGGCCCCCCCCCCTCGG TGTTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAGA CAAGCCGCCCCCCCCGGTGTTTGCCATCGGGGTTGTGTTTTCGTCGCTTG GCAACGACGTTGTAAAACAAGCCAATTCACTTCGTAAACTCGGCAACCAG GTTACCGTTTTTTTTTTTTTTACCTCCGGTTTTTTTTTTGGCGGTAACCA TAATGGTGGTCGAGTAGATCATGTTGTGCGGGGTCGAGAAACCTCACTCC GCGCAAGGGGGATGATCGCACCACGTTGTGTTAAAATGGTCAAGCACCCT CGAGGCAGTTACACAGTGCTTACAACTGTCTCTGGAAGTGAAAGCACCAG AAAATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCC CCCCCCCCCCGGGCCCAGACTTCGACCTGTTGGCCTTTCTGTCTTGAGAT TGTTTTTCCGCGTGTACCCAGGAGGTGTTGGTTTTTGGCGCGCATCTGTA TCATCGCCTGAACGAGGCAACTCTAGTGATTCCCTCTTGATTTTGTATTA AGTCGTAAATGGAAATGTGCAGGGGTCTCATCAGATCAGGGCCGCCATTT GATTGAGCCCTTTTGTCTAGACATTCCGTCACACTTGGGCGTGTTTGTCG TCGTTATCCTCGGTTCCTCCGAACTAGCGCTGACCCGGCCGCACTCGTCA TGCGTTGTTTCCCACGTTCCAGGGCAAGAATGAGGAAGCCGCGCCGCTGT TGGAACGCTCCCTTGCCGTCACCGAGAAAGCGTTAGGACCTGATCACCCT GATGTGGCAACAATACGCAACAACTTGGTCAATTTGTCGCAGAAGCAGGA AAGAGCCGTGGGCACCATCCATTAAGACTCCTTGGGTTCCCTATCGAGTC ATACGGTCTGTTCCTGGTGATGATAAGTTGTACGGGAGGAGCTTAAAGCT GACGCAGTTGTGCCTAGATGACCGCTAGTCACCGACTCGTCACGGTTATA AAAGAACAAACCGCCTGTCGACCCTGTCCGCAGATTTCTGCGAAGGACTA CAGGAGAGAAAGAGATTGGAGTGACGTCCGACATGAGCTAGCGAAGCACG TTGTCTGTGCAGTGTTTTACGCGATCACGAGGCAATCTTAAGCAGAGTGT CGCACAGCCAGTGTGCCACATGCAGTCCAGTCAGGGGTAACACCAACACG AAGCCAGCTCATCATTGGTTCAAAAGGGGTGCAGTCCACCTCGGGTATTT CGATTCCGCAAGAATCAATGCAGGTTGCCATTTTTCTGTACCGAAGTTCT GCTTTTCCGGGCCGAACAGCCTCATCATCGTGGTTTACCCTGTTGACCAA TCACCATATTTTGCTGCCCAGTACCCCCTGCCAACCTAGGTTGCAAGGCC TCTATTCGGGTGACAATTTGAAGTGCTACAACAGGCCCTGAGTAGTGGTC CACGGTGGGGGGGAAGCCGTCTTTGGATATCTGCATTTCTAAGATATCGT AGATTGGGTTTCTGGCTGGCTGGGATACCTTTTTTGCAGGAGAGAGGGAG AGAAAGATATAGAGAGGGAGAGAGAGACTGACGGGGGGG
back to top

Coding sequence (CDS) from alignment at Scaffold_68:13697..26385+

>EsuBft1397_3a-0001 ID=EsuBft1397_3a-0001|Name=EsuBft1397_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1278bp|location=Sequence derived from alignment at Scaffold_68:13697..26385+ (Ectocarpus subulatus male Bft15b)
ATGTCTGACGTACAGTTGTGTGACCAACCCCTAGCATGGCGAGCTTCGAG
GGTGGGGTTTCAGGGCAAATACACTGAAGCTGGGCCGCTCTATGCGCGAT
GTCAGGCGATACAAGAGGCAGTTCTAGGCCCCGATCACCCACGCCTGGCC
ACAACGCTCGGTAACTGGGCAGCATTGTTGTACGAACAGGATGTTCCGAC
TTTCGCCATGACGTCATCCCGTCTTCCCGTCACGTTCCAGGGCAAGCCTG
AAGAGGCCGGGGCGTTGTTTAACCGTTCCCTTGCCATCCGCGAGAAGGCT
CTTGGACCTGATCACCCTGACGTGGCTACATCGCTCAACAACCTGTCATG
CTTGTTAGAGAGCCAGGGCAAGTATGGGCAGGCCGGACCGTTGTACGAAC
GTTCCCTTGCCATCCGCGAGAAAGCTGCTCTTGGACCTGATCACCCTGAC
GTGGCTACGTCGCTCAACAACCTGGCATGCTTGTTAGAGAGCCAGGGCAA
GTACGCTGAGGCTGAGTCGCTCTATGCGCGGTGTCAGGCGATAGAAGCAA
AGGTTCTAGGCCCTGAACACCGACGCCTGGCCACAACGCTTTACAACTGG
GCGGCGCTGTTACACAAGCAGGGAAAATACGCTGAAGCTGAGTCGGTCTA
TACGCGGTGTCAGGAGATAGAAGAGAAGGCTCTGGGCCCTGAGCACCCAA
GCCTGGCCACAACACTCAATAGCAGGGCGAAGTTGTTGACGACGCAGGGC
AACTATACTGAGGCTGAGGCCCTCTATGCACAGTGTCAGGCGATACAAGA
GAAGATTCTGGGTCCTGAGCACCCAAGCCTGGCCACAACGCTCGACAAAT
TGGCAGTAGCGTTGTACAAGCAGGGCAAGTTTGGGCAGGCCAGGCCGTTG
TTTGAACGTTCCCTTGCCATCGTGGAAAAAGTTCGAGGATCTGATCACCC
TGACGTGTGGTCATTGCTCGGCAATTGGGCGTGCTTGTTGAAGAGCCAGG
GCCAATTCGCTGAGGCTGAGCCGCTATATGCGCGGTGTCAGGCGATAGAA
GAGAAGGTTCGAGGTCCTGAGCACCCAAGCCTGGCTACGACCCTCAACAA
CCGGGCGAGCGTGTTGTTTAGCCAGGGCAAGAATGAGGAAGCCGCGCCGC
TGTTGGAACGCTCCCTTGCCGTCACCGAGAAAGCGTTAGGACCTGATCAC
CCTGATGTGGCAACAATACGCAACAACTTGGTCAATTTGTCGCAGAAGCA
GGAAAGAGCCGTGGGCACCATCCATTAA
back to top