Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1750_6 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Length | 177 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1750_6a-0001 ID=EsuBft1750_6a-0001|Name=EsuBft1750_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1777bp|location=Sequence derived from alignment at Scaffold_647:653019..655895- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGGACACCACCGCCGCCGACGCAGCCGTAGCTCCCGCCGCCCCCGC
CATCCCCTCCGACATGTTTTTTGCGGAGCTGCACCAGCTTTTTCTGCAGC
AGCGCCAGCAGCAGTGCCAGCAGAGGGAAGAGCGGTACCAGCTACAACAC
CAGCCCGGTCTAGAGCGACGAGACCAGGAGCTGCTCTATCTACAGGAAAA
CGAGGTGCAGCAGCAACACCAGCAGCATCGTCTGGAGAAGCAGCGGCAGC
AAGAGCAGCAGGCGGAGCAAGAGCGTTTTCTGCAGACGAAGCTGCAGAAG
CTGCGACCGAAGGCGGGGGAGGTTTTGTGGAAAACGAGGATGAGCCTGCC
GGTGGAGCCTCGGCCGAAGTCGGAGGGGGCGAGGGTGGAGTCGGAGAGTC
CAAGCCCAAGCAGAGGATGCCGCCGCCGGTGGAGCCTCGGCCGCCGCCGG
AGAGCACGAGGGCGGAGCCGGTCATGCCCAAGCCGAACCAGCGGACCAGG
AGGGGGAGGGCGGGGGGCTGCACGGAGGAGAGGCTCTCGCGGAGGCCCGC
GGCCAGAAGCGTGGTCTACCGGAGGGCTTTTGAAGGTGTGTGGGGCCGGG
ACCGGAGGAGGCTCTGTGGAAATTGGCCCCCCCCAGCCCAAGTCGGAGGG
GGCGAGGGTGGGGTCGGTCAAGCCCGAGCCGAGGATGGGGCGGGCGGTGG
GCAGCATGGAGGAGAGGCTCCCGCTGAGGCCCGTGGCCGAGGAGGGGGCG
GGCGGCGGGCTGCACGGAGGAGGGCTCCTGCGGAGGCCCGCGGCCAGAAT
CGTGATCTACCGGAGGGCTTTTGAAGGTGGGGCCGAGACCGGAGGAGGCT
CTGTGGAAATTGAGAAGGAGGCCACCAGTGGAGCCCCAGCCGAAGTCGGA
GGGGGCGAGGGTGGGTTCGGTCAAGCCCAGGCCGAGGAGGGGGCGGGCGG
CGGGCAGCATGGAGGAGAGGCTCCCGCGGAGGCCCGCGGTCAGAAGCGTA
ACCTACCGGAGGGCTTTTGAAGGCGTGTTTTTGTTTATGTTGTAGCTTTT
ACAGGCAGCTGGCCTTGCCTCCCCGCTCCCGGTTAAGCGGTCGGAAACGC
AGTCTACCAGTGGACTTTTGAAGGTGTGTTTTTGTACGATATCTCATTGC
ACAAACTTAAATCGTAAGGTGGGGCCGGGACCGGAGGAGACTCTGTGGAA
ATGGAGGAGGGGGCGGGCGGCGGGCACATGGCGGAGAGGCTCCCGGGGAG
GCCCGCGGTTAGAAGCATGCTCTACCTGAGGACTTTTGGAGGTGTGTTGT
TGTTTCGACAAATACAGGTGGTGGCTGACTATTTGGCTGACTATTTCAAA
ATGCCTAACACATGAATTAGGGCCTGTGTGTGTGTTTGGTGTCTGTGTGT
GTGTGTGTGTGTGTGTGTGTTTTATCATTAGCATCGACCGCGCTAACCGG
CTGACCAATGAAAAGACGTCGGTCTCAGCGGGTAAAAGTGTGTGTGTGTG
TGCGTGTGTGTGCGTTTACCCCCTTCTATTCTGGCGCCAGTCTGCACAAC
TTTCGGTATATATGTTTGACGTATTCAGCCGGGGTCACACAGGAGTTTTT
TTTTTCCCTCCACTTTCCTTCTTGGTGGCGTGGGTTTTTTCATGGGGTTT
TAGAGGGAAGAGTAAGGACAGCCTGATTCTGGAAGAAACGCGGTGGGGCA
CAACGTTCTGGGCAGGTATTACGCCGTAGAGGATTGTACAGACAACACTC
AATACACAAATCCAGATTCATGAGCGT back to topprotein sequence of EsuBft1750_6a-0001 >EsuBft1750_6 ID=EsuBft1750_6|Name=EsuBft1750_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=339bp
MEDTTAADAAVAPAAPAIPSDMFFAELHQLFLQQRQQQCQQREERYQLQH
QPGLERRDQELLYLQENEVQQQHQQHRLEKQRQQEQQAEQERFLQTKLQK
LRPKAGEVLWKTRMSLPVEPRPKSEGARVESESPSPSRGCRRRWSLGRRR
RARGRSRSCPSRTSGPGGGGRGAARRRGSRGGPRPEAWSTGGLLKVCGAG
TGGGSVEIGPPQPKSEGARVGSVKPEPRMGRAVGSMEERLPLRPVAEEGA
GGGLHGGGLLRRPAARIVIYRRAFEGGAETGGGSVEIEKEATSGAPAEVG
GGEGGFGQAQAEEGAGGGQHGGEAPAEARGQKRNLPEGF back to topmRNA from alignment at Scaffold_647:653019..655895- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1750_6a-0001 ID=EsuBft1750_6a-0001|Name=EsuBft1750_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2877bp|location=Sequence derived from alignment at Scaffold_647:653019..655895- (Ectocarpus subulatus male Bft15b)
ATGGAGGACACCACCGCCGCCGACGCAGCCGTAGCTCCCGCCGCCCCCGC
CATCCCCTCCGACATGTTTTTTGCGGAGCTGCACCAGCTTTTTCTGCAGC
AGCGCCAGCAGCAGTGCCAGCAGAGGGAAGAGCGGTACCAGCTACAACAC
CAGCCCGGTCTAGAGCGACGAGACCAGGAGCTGCTCTATCTACAGGAAAA
CGAGGTGCAGCAGCAACACCAGCAGCATCGTCTGGAGAAGCAGCGGCAGC
AAGAGCAGCAGGCGGAGCAAGAGCGTTTTCTGCAGACGAAGCTGCAGAAG
GTGCGTGGATGATGATCAATTCCCTTTTTGATAGACGTGTAGTTTCTTCC
CGTTGATACCCACAGCTCGTTGACACACTCCCCGAATCTTTCGTCCTCAC
TGTTCAAGCTGCGACCGAAGGCGGGGGAGGTTTTGTGGAAAACGAGGATG
AGCCTGCCGGTGGAGCCTCGGCCGAAGTCGGAGGGGGCGAGGGTGGAGTC
GGAGAGTCCAAGCCCAAGCAGAGGATGCCGCCGCCGGTGGAGCCTCGGCC
GCCGCCGGAGAGCACGAGGGCGGAGCCGGTCATGCCCAAGCCGAACCAGC
GGACCAGGAGGGGGAGGGCGGGGGGCTGCACGGAGGAGAGGCTCTCGCGG
AGGCCCGCGGCCAGAAGCGTGGTCTACCGGAGGGCTTTTGAAGGTGTGTT
TGATGTGTAGTACTGAAGTAGTCTGGCCTCGCTGCCCGCTCCCGGATAAG
CGGTCGGAAACGCAGACTTGTGACGGTGTGTATTTTTACGATATATCATT
GCAGGTGGGGCCGGGACCGGAGGAGGCTCTGTGGAAATTGGCCCCCCCCA
GCCCAAGTCGGAGGGGGCGAGGGTGGGGTCGGTCAAGCCCGAGCCGAGGA
TGGGGCGGGCGGTGGGCAGCATGGAGGAGAGGCTCCCGCTGAGGCCCGTG
GTTAGAAGCGTGGTCTACCGGAGGGCTTTTGAAGGTGTGTTTTTGTTTAT
TTTGAGGCTTCTACAGCCAGCTGGCCTCGCTCCCCGCTCCCGGATAAGCG
GTCGGAAACGCAGTCTACCACCCAACTATTGAAGGTGTTTTTTTACGATA
TATCATTGCACAAACTTAAATTGTAAGGTGGGGCCGGGGCCGGAGGAGGC
TCTGTGGAAATTGAAGAGGCGGCGAGGGTGGGGTTGGTCAAGCCCAGGCC
GAGGAGGGGGCGGGCGGCGGGCTGCACGGAGGAGGGCTCCTGCGGAGGCC
CGCGGCCAGAATCGTGATCTACCGGAGGGCTTTTGAAGGTGTGTTTTGTT
TGATAAATACATGTGTATTTTGTAGCTCTTACAGGCTGCTGGCCTCGCTC
CCCGCTCCAGGATAAGCGGTCGGAAACGCAGTCTACCAGCGGACCTGTGA
CGGTGTGTGTGTCTTACGATATATCATTGCAGGTGGGGCCGAGACCGGAG
GAGGCTCTGTGGAAATTGAGAAGGAGGCCACCAGTGGAGCCCCAGCCGAA
GTCGGAGGGGGCGAGGGTGGGTTCGGTCAAGCCCAGGCCGAGGAGGGGGC
GGGCGGCGGGCAGCATGGAGGAGAGGCTCCCGCGGAGGCCCGCGGTCAGA
AGCGTAACCTACCGGAGGGCTTTTGAAGGCGTGTTTTTGTTTATGTTGTA
GCTTTTACAGGCAGCTGGCCTTGCCTCCCCGCTCCCGGTTAAGCGGTCGG
AAACGCAGTCTACCAGTGGACTTTTGAAGGTGTGTTTTTGTACGATATCT
CATTGCACAAACTTAAATCGTAAGGTGGGGCCGGGACCGGAGGAGACTCT
GTGGAAATGGAGGAGGGGGCGGGCGGCGGGCACATGGCGGAGAGGCTCCC
GGGGAGGCCCGCGGTTAGAAGCATGCTCTACCTGAGGACTTTTGGAGGTG
TGTTGTTGTTTCGACAAATACAGGTTTATATTGTAGCTTCTACAGGCTGC
TGGCCTCGCTCCGCGCTCCCGGATAAGCAGTCGGAAACGCAGTCTACCAC
CGGATTTGTGACGGTGTGTGTTTTTACGATATCTCATTGCACGAACTTCA
ATCGTAATACCCCACCGCCCCCAATATTTCCCGCCGCAGATATATTGCCA
GGCCGGGCTTTCTTCACCCGTTCGTGCGGAGGAAGAAGGGTTGTTCGGCG
TCACCGCTCCCCTCGAGAACAAGGGCGGGAGTGGCACGAGACCTTGGTGG
CAACTGCGCCTGAACGCCAGCTGCATATACTGCAGCGGGGGAAGCACGGG
CGACTAGCTATTTTTTTATGGGGCTTAGGGCCTGCCTGTGGGGGGTTGAA
CGGGGTTATGTGCACGGGCGCCCGGCTATTTGGGCTTAACACATCGTTAT
TTTGGGTATGAAGGCTTGACACATTATTTAGGGCCTGTTTCGTTTCTGTT
CGGGGGTGTACATACAGGTGGTGGCTGACTATTTGGCTGACTATTTCAAA
ATGCCTAACACATGAATTAGGGCCTGTGTGTGTGTTTGGTGTCTGTGTGT
GTGTGTGTGTGTGTGTGTGTTTTATCATTAGCATCGACCGCGCTAACCGG
CTGACCAATGAAAAGACGTCGGTCTCAGCGGGTAAAAGTGTGTGTGTGTG
TGCGTGTGTGTGCGTTTACCCCCTTCTATTCTGGCGCCAGTCTGCACAAC
TTTCGGTATATATGTTTGACGTATTCAGCCGGGGTCACACAGGAGTTTTT
TTTTTCCCTCCACTTTCCTTCTTGGTGGCGTGGGTTTTTTCATGGGGTTT
TAGAGGGAAGAGTAAGGACAGCCTGATTCTGGAAGAAACGCGGTGGGGCA
CAACGTTCTGGGCAGGTATTACGCCGTAGAGGATTGTACAGACAACACTC
AATACACAAATCCAGATTCATGAGCGT back to topCoding sequence (CDS) from alignment at Scaffold_647:653019..655895- >EsuBft1750_6a-0001 ID=EsuBft1750_6a-0001|Name=EsuBft1750_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1020bp|location=Sequence derived from alignment at Scaffold_647:653019..655895- (Ectocarpus subulatus male Bft15b)
ATGGAGGACACCACCGCCGCCGACGCAGCCGTAGCTCCCGCCGCCCCCGC
CATCCCCTCCGACATGTTTTTTGCGGAGCTGCACCAGCTTTTTCTGCAGC
AGCGCCAGCAGCAGTGCCAGCAGAGGGAAGAGCGGTACCAGCTACAACAC
CAGCCCGGTCTAGAGCGACGAGACCAGGAGCTGCTCTATCTACAGGAAAA
CGAGGTGCAGCAGCAACACCAGCAGCATCGTCTGGAGAAGCAGCGGCAGC
AAGAGCAGCAGGCGGAGCAAGAGCGTTTTCTGCAGACGAAGCTGCAGAAG
CTGCGACCGAAGGCGGGGGAGGTTTTGTGGAAAACGAGGATGAGCCTGCC
GGTGGAGCCTCGGCCGAAGTCGGAGGGGGCGAGGGTGGAGTCGGAGAGTC
CAAGCCCAAGCAGAGGATGCCGCCGCCGGTGGAGCCTCGGCCGCCGCCGG
AGAGCACGAGGGCGGAGCCGGTCATGCCCAAGCCGAACCAGCGGACCAGG
AGGGGGAGGGCGGGGGGCTGCACGGAGGAGAGGCTCTCGCGGAGGCCCGC
GGCCAGAAGCGTGGTCTACCGGAGGGCTTTTGAAGGTGTGTGGGGCCGGG
ACCGGAGGAGGCTCTGTGGAAATTGGCCCCCCCCAGCCCAAGTCGGAGGG
GGCGAGGGTGGGGTCGGTCAAGCCCGAGCCGAGGATGGGGCGGGCGGTGG
GCAGCATGGAGGAGAGGCTCCCGCTGAGGCCCGTGGCCGAGGAGGGGGCG
GGCGGCGGGCTGCACGGAGGAGGGCTCCTGCGGAGGCCCGCGGCCAGAAT
CGTGATCTACCGGAGGGCTTTTGAAGGTGGGGCCGAGACCGGAGGAGGCT
CTGTGGAAATTGAGAAGGAGGCCACCAGTGGAGCCCCAGCCGAAGTCGGA
GGGGGCGAGGGTGGGTTCGGTCAAGCCCAGGCCGAGGAGGGGGCGGGCGG
CGGGCAGCATGGAGGAGAGGCTCCCGCGGAGGCCCGCGGTCAGAAGCGTA
ACCTACCGGAGGGCTTTTGA back to top
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