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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Seed ortholog | 2880.D7G873 |
| ProteomeId | EsuBft1011_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 127 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.92e-105 |
| EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
| KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
| KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
| KEGG Module | M00089 |
| EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
| Description | acetylation-dependent protein binding |
| COG category | BK |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1011_6a-0001 ID=EsuBft1011_6a-0001|Name=EsuBft1011_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1271bp|location=Sequence derived from alignment at Scaffold_644:358643..361257+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CTCAAGAGAGTGCGAGTTTCTAGTGCTAACAAAGAGCGCAAGCGAAGGCA
CCGGCAGCCGTTGCCGGAACAGCAGCAGAAGCCTCGAGCACAACAACAGG
AGCCCGATCAACGCGTGGAGGAGATCGAGACCAAGCCATCTATCAAGCAA
CCAGCTCTTCGTTCCGCGAACATTAGCCACGCGTAGATCCGGGGCACGGC
GTTGCTACCCCCTCAGTGTCACGCTTTTCTCTCTCCCTCTCTCACTTTTT
TGTCGGTATGTCGGATACCCCTGAGGGACTGCAACTGCAAATTGACGCGG
CGAAGAAGTTTACTGATAAGTGGAGATTGTCTGCCAACGTTAAGAAGAGT
GCCGTCACGGTATGCAACGAGAACAAGGAGGAACCAGTAGAACATAGATG
GAAGTGGGGGATCGAGGAAATTGCAGTAGTGGACCAGTACACATACCTCG
GAGTAGAGATCGCAAAAGACTGCTCGTGGAATGCACACATGTCCAAGGAA
ACGGAAAAGGAGAAAGCACGAGCAGGGAAGCTGCACCCAATACTCGCAAA
CCGGCACCTCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTAATCG
TACCGAGGCTAGAGTACGCCGGAGAATTATGGGAAGGAAATAAGAAGGTA
GTGAAAGAACTCGAGGCGGCGCAGATGAAAGCAGCGAAAATCATCCAAGG
ATGCTCCAAGCGCACAAGTAATGCAGCCGTGAGGGCAGAATTGGGGATCC
AATCCCTACGGTCGGGAAGAGACGCGAGAAAGCTGACATGGCAGTATAGC
ATGTGCGGGATGGGAGAGGAGAGACAACCCACGGAATGGGTCAAGGTTGT
AGAGGGCGTATGGAAGGGGCTCGACATCGACGAAGATGAAACGCTGGAGA
CGGAGGGTCTACAGGGCTTCAAGGAGATATCTGTTGCTTGTGCCGAGAGA
GAAGACAAGAATCTAAGGAAAGAAACCAAGGATAAGGAGGGTCTAGAAGT
GTATGGAATGTTGAAGGAAGGCATAGGGTTCAAGGATTACCTACATGGAC
CAATGGATGCAGGAACAAAGCTTAAGGTCAAATTCAGGACCGGGGACATA
GGCGTTCGAGAACGTCGACGAAGACGTAGGACGGTAGACGAGGAAGACGA
CGAGTTCAAATGTGATTGCGGCTTCGAATGCGAAGACCGTGTTCATGTAG
TCGCGGAATGTCCGTTGTACAAGAAGGAGAGGGAAGTGGAAGACATTTCT
GAGCCACCTTTGGCAAAGTAG back to topprotein sequence of EsuBft1011_6a-0001 >EsuBft1011_6 ID=EsuBft1011_6|Name=EsuBft1011_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=337bp
MSDTPEGLQLQIDAAKKFTDKWRLSANVKKSAVTVCNENKEEPVEHRWKW
GIEEIAVVDQYTYLGVEIAKDCSWNAHMSKETEKEKARAGKLHPILANRH
LDTRIKLTVLKSVIVPRLEYAGELWEGNKKVVKELEAAQMKAAKIIQGCS
KRTSNAAVRAELGIQSLRSGRDARKLTWQYSMCGMGEERQPTEWVKVVEG
VWKGLDIDEDETLETEGLQGFKEISVACAEREDKNLRKETKDKEGLEVYG
MLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGVRERRRRRRTVDEEDDEF
KCDCGFECEDRVHVVAECPLYKKEREVEDISEPPLAK back to topmRNA from alignment at Scaffold_644:358643..361257+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1011_6a-0001 ID=EsuBft1011_6a-0001|Name=EsuBft1011_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2615bp|location=Sequence derived from alignment at Scaffold_644:358643..361257+ (Ectocarpus subulatus male Bft15b)
CTCAAGAGAGTGCGAGTTTCTAGTGCTAACAAAGAGCGCAAGCGAAGGCA
CCGGCAGCCGTTGCCGGAACAGCAGCAGAAGCCTCGAGCACAACAACAGG
AGCCCGATCAACGCGTGGAGGAGATCGAGACCAAGCCATCTATCAAGCAA
CCAGCTCTTCGTTCCGCGAACATTAGCCACGCGTAGATCCGGGGCACGGC
GTTGCTACCCCCTCAGTGTCACGCGTCAGTGGATGGGGATGAGTTTTCCA
TTTCCCAGATTTCAGGATTCATGGGTGTTAAGCTAGGTAGCCAGGCCGGG
CAGGTGGGGAGAAGGATGAAGGCTCTGTACACCGCTCGGTGTGGCGCGGT
TGCAGGCGATAAAATCCCGAACAGGACCGCGGGGTACAACGGATAAAAAA
TATTCAGCGAGAACGTGTACGACGCACGTGACCGTGGTATCATGGAGTAG
GCGATCCGTAAGGTAGCTCAGACTTGATCAGTTTTTTGTTTTGGGGTTTT
TGTCGCACTCTGGCGTAAGTGGTATATGGTGCCACGCGGGCAAGCATGAA
ACCATTTGTCAATAAACTAAACAACGTAACGCATCAGAACATATATTTAC
GTGGCATGGTTGAGAAGGTGGTGCACATGGCTTCCCTTCGAGCCATCCGT
CGGCGTCAAATCGGGTCCATCATCGAGCAACCGTACAGTTAACGCTACAA
TCGGCACGGAGTGTGGAATCTGTCGTCCTTTGCGGTACTCTTCTACTACA
TGTGGATAAAACCGGCGGGGCTTGCTCCCTTCTATTCGCACTTCGCTCTC
TCCCCCTCGCCGATGGAAACAACGGCGGTTTGGAAAACGAACGGAGGATA
GGCGCTCCTTGCGCTCGTGACTCATCGTCGGAACATCATGGCTGTTTGAA
CTTTGTTCTCTCCCTCTCTCCGATCGGAGAAATGCTGGTTGGGAGAACGA
GAGCGCGATCAGTGTTCATCACGTGCGCGACACATCGTCGAACATCATGA
CTGTTTGAACATTATTTCTTGCGCGCGCGACCACGCGTCGGGCATATCAT
GGGTGTTTAAATCACTGTAGAAGAAGATGCTGCGGAACAGAGGGTCGATG
CCTCCTTGCGCACGTGACCAAGCGTCTGACACATCACGGCTGCTCGAACT
TTGCTCTCTCCCTGTCCCCCCGAGTGCAAAAAATGTCGGCGATGGAACGA
GAGCACGACCGGTGCTCTCGCGTGCGAGACAAACCGTTTGAAACATCATG
GCTATTTGAACGATGTTTTTTTCTTCTCGCAAATTTGACAATTGCTGGTT
TGTGGAACGAACGGAGAATCGATGCCTCCTTTCACGCGAGATAAAGCGTG
GGACACGTAATGGTGTGCCAAGTTTTCTCTCTCCCTCTCTCACTTTTTTG
TCGGTATGTCGGATACCCCTGAGGGACTGCAACTGCAAATTGACGCGGCG
AAGAAGTTTACTGATAAGTGGAGATTGTCTGCCAACGTTAAGAAGAGTGC
CGTCACGGTATGCAACGAGAACAAGGAGGAACCAGTAGAACATAGATGGA
AGTGGGGGATCGAGGAAATTGCAGTAGTGGACCAGTACACATACCTCGGA
GTAGAGATCGCAAAAGACTGCTCGTGGAATGCACACATGTCCAAGGAAAC
GGAAAAGGAGAAAGCACGAGCAGGGAAGCTGCACCCAATACTCGCAAACC
GGCACCTCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTAATCGTA
CCGAGGCTAGAGTACGCCGGAGAATTATGGGAAGGAAATAAGAAGGTAGT
GAAAGAACTCGAGGCGGCGCAGATGAAAGCAGCGAAAATCATCCAAGGAT
GCTCCAAGCGCACAAGTAATGCAGCCGTGAGGGCAGAATTGGGGATCCAA
TCCCTACGGTCGGGAAGAGACGCGAGAAAGCTGACATGGCAGTATAGCAT
GTGCGGGATGGGAGAGGAGAGGTTGCCGAGAATTGTATGGGAGGCGAAGT
GGGCAAACAAAAAGAGGGTAGACAACCCACGGAATGGGTCAAGGTTGTAG
AGGGCGTATGGAAGGGGCTCGACATCGACGAAGATGAAACGCTGGAGACG
GAGGGTCTACAGGGCTTCAAGGAGATATCTGTTGCTTGTGCCGAGAGAGA
AGACAAGAATCTAAGGAAAGAAACCAAGGATAAGGAGGGTCTAGAAGTGT
ATGGAATGTTGAAGGAAGGCATAGGGTTCAAGGATTACCTACATGGACCA
ATGGATGCAGGAACAAAGCTTAAGGTCAAATTCAGGACCGGGGACATAGG
CGTTCGAGAACGTCGACGAAGACGTAGGACGGTAGACGAGGAAGACGACG
AGTTCAAATGTGATTGCGGCTTCGAATGCGAAGACCGTGTTCATGTAGTC
GCGGAATGTCCGTTGTACAAGAAGGAGAGGGAAGTGTACGTGACTGAGCT
GGGAACAATAGATAGGATGTACAGGGAAATGTTTGAGGCATGGAATAGAG
AGGAAAGGACGGTAGCTGTACTGGGGTATAGGAGTTGGGTCGATAAGGCG
GGAAGGGATATCGTTAGGATAGACAGACTAGGGAAGACATTTCTGAGCCA
CCTTTGGCAAAGTAG back to topCoding sequence (CDS) from alignment at Scaffold_644:358643..361257+ >EsuBft1011_6a-0001 ID=EsuBft1011_6a-0001|Name=EsuBft1011_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1014bp|location=Sequence derived from alignment at Scaffold_644:358643..361257+ (Ectocarpus subulatus male Bft15b)
ATGTCGGATACCCCTGAGGGACTGCAACTGCAAATTGACGCGGCGAAGAA
GTTTACTGATAAGTGGAGATTGTCTGCCAACGTTAAGAAGAGTGCCGTCA
CGGTATGCAACGAGAACAAGGAGGAACCAGTAGAACATAGATGGAAGTGG
GGGATCGAGGAAATTGCAGTAGTGGACCAGTACACATACCTCGGAGTAGA
GATCGCAAAAGACTGCTCGTGGAATGCACACATGTCCAAGGAAACGGAAA
AGGAGAAAGCACGAGCAGGGAAGCTGCACCCAATACTCGCAAACCGGCAC
CTCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTAATCGTACCGAG
GCTAGAGTACGCCGGAGAATTATGGGAAGGAAATAAGAAGGTAGTGAAAG
AACTCGAGGCGGCGCAGATGAAAGCAGCGAAAATCATCCAAGGATGCTCC
AAGCGCACAAGTAATGCAGCCGTGAGGGCAGAATTGGGGATCCAATCCCT
ACGGTCGGGAAGAGACGCGAGAAAGCTGACATGGCAGTATAGCATGTGCG
GGATGGGAGAGGAGAGACAACCCACGGAATGGGTCAAGGTTGTAGAGGGC
GTATGGAAGGGGCTCGACATCGACGAAGATGAAACGCTGGAGACGGAGGG
TCTACAGGGCTTCAAGGAGATATCTGTTGCTTGTGCCGAGAGAGAAGACA
AGAATCTAAGGAAAGAAACCAAGGATAAGGAGGGTCTAGAAGTGTATGGA
ATGTTGAAGGAAGGCATAGGGTTCAAGGATTACCTACATGGACCAATGGA
TGCAGGAACAAAGCTTAAGGTCAAATTCAGGACCGGGGACATAGGCGTTC
GAGAACGTCGACGAAGACGTAGGACGGTAGACGAGGAAGACGACGAGTTC
AAATGTGATTGCGGCTTCGAATGCGAAGACCGTGTTCATGTAGTCGCGGA
ATGTCCGTTGTACAAGAAGGAGAGGGAAGTGGAAGACATTTCTGAGCCAC
CTTTGGCAAAGTAG back to top
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