Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1011_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 29 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1011_3a-0001 ID=EsuBft1011_3a-0001|Name=EsuBft1011_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=299bp|location=Sequence derived from alignment at Scaffold_644:334028..334969+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGGATGCGGGGCCAGCGTTTTTGCCGCAGCGACGACGTCGTCACCACG
AAGTCCTCAAAAGCTAAAAGCGCAGGGGACGGCCTGGAAGTGTGTGGGCG
TGTAGTTCAGTTGTGAGCACGCAAACGTGCTGCAGGGATTGTAGGTGTAC
CTCGTCGGGCTTGTGTTCCCCTTTCTTGCTAATAGTGTGCGTGTTCTTTA
GATCTTCTGATGGCTCTAGCATTTTTGTGACCACGGACCGAGTCTTTGCT
AGATTTTGGGATTAGCAACTGACACGAGTTTAATGTGAAGAAAACAACA back to topprotein sequence of EsuBft1011_3a-0001 >EsuBft1011_3 ID=EsuBft1011_3|Name=EsuBft1011_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=34bp
MGCGASVFAAATTSSPRSPQKLKAQGTAWKCVGV back to topmRNA from alignment at Scaffold_644:334028..334969+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1011_3a-0001 ID=EsuBft1011_3a-0001|Name=EsuBft1011_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=942bp|location=Sequence derived from alignment at Scaffold_644:334028..334969+ (Ectocarpus subulatus male Bft15b)
ATGGGATGCGGGGCCAGCGTTTTTGCCGCAGCGACGACGTCGTCACCACG
AAGTCCTCAAAAGCTAAAAGCGCAGGGGACGGCCTGGAAGGTACTACTGC
TGTATCGTACAGTCGCAAACTAGACAAGTCGTACATGAATCATCATGCGG
CATGTTATCTCGCGGAAACCTACATGCACGTAACCTGCTGTGTACATTGA
AGCAACTGCGCTGTAGACCATACTCGATGTTGTTGCATTTGTATTTTAGA
CTGGTGGCATACATGGAGTGGACACCGACAACCACACGCAATCGGAGCTG
TTTACGGTCGTGCCGGCCCAACCCAACCGAACCATCTCACCACGGCCAAC
GCGGACGGCATGGTGACCGAGAACGGGGCGAGAACGGGGTGTCGCGTTCT
AAAAAAGAATATCGGAATGCGCAACAGAGAGAGGACACTGGAGAGTAGTT
TAATCGACCGCTCGAACCAACGCTCGACCAATCAAAGGGCGTAAGACCCC
GTACATTGGAAGTTACCGTAAAAAACTGTACTGACCGGTCGATCATCTAA
GGCGGGAAGTCCAACGCTGTTGTACCTACCACCCGTTTTCGGGTCTATCA
ATTTCTGGGGAGCTCTGATGAAGATCGCAAAGAACCCTGCCTTACACTAT
GCTAGACAACTAACGATAATGTGTCGCACGAGGGTTAAGTGCGGGACACG
GGGGGTGATGCTGCTGCTGTAGTCAAATTGTAGTGTGTGGGCGTGTAGTT
CAGTTGTGAGCACGCAAACGTGCTGCAGGGATTGTAGGTGTACCTCGTCG
GGCTTGTGTTCCCCTTTCTTGCTAATAGTGTGCGTGTTCTTTAGATCTTC
TGATGGCTCTAGCATTTTTGTGACCACGGACCGAGTCTTTGCTAGATTTT
GGGATTAGCAACTGACACGAGTTTAATGTGAAGAAAACAACA back to topCoding sequence (CDS) from alignment at Scaffold_644:334028..334969+ >EsuBft1011_3a-0001 ID=EsuBft1011_3a-0001|Name=EsuBft1011_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=105bp|location=Sequence derived from alignment at Scaffold_644:334028..334969+ (Ectocarpus subulatus male Bft15b)
ATGGGATGCGGGGCCAGCGTTTTTGCCGCAGCGACGACGTCGTCACCACG
AAGTCCTCAAAAGCTAAAAGCGCAGGGGACGGCCTGGAAGTGTGTGGGCG
TGTAG back to top
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