Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft101_10 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 78 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft101_10a-0001 ID=EsuBft101_10a-0001|Name=EsuBft101_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=780bp|location=Sequence derived from alignment at Scaffold_627:566347..567126+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
AGGAGCGATGGCGGGGAGCGTGGGATACCGGGGCGGATAGAGAGCGACTG
GGTGTCTCGTGTAGGAGAGGACCTCGTGGCCTTCAACATGGAAGACGAAG
AGGAAGGGGGTCAATGGAAAGAGAGCGCCAAGGATCCGGAGGTGTGGTAC
AACAAGGTCGAGGACGGGGCGGCATGGTTCATGAGGAACTGGCACAGGCA
GGAAGCGGAAGCGTTCGCGAAGCGCCAGCGCGCGAGGGAAGCAGAAAGAA
GCAGAGAGTACGGCCTCAGGACCGAAGAGAAAGAGAGCCGGGGAAGCGGC
GGTGGGGGGGAAGAAACGGCGACCGGGCACTGCTGTAGAAGCGAGTAGGG
CGGCCGAGGCAGCACTTGTGGCGAACTATGTACCCGGCTGATGTTGTTGC
GCCCTGTTCCCCTCCCTGCTGTATGCTATACTCCTTTATGTATGTCCTTT
GTATTGCCTTCGGCCTCTGTGCTGTGTTCCTGTGTTTCTTTTTTTATTAC
CTCCCTGCCTACTCTGCTGTGTTGGGTACCGTGATCTCGCTTTGCTGTTG
CCTTTGTTTTTGTACGTCTGGCTGTCTGCCCATTTGCCGCCTCTTTGTCC
TGTTTGCTCCGTTACTCCCATGCCCTGGTGCGTAGGGCCTGGTGCTGGCA
CGTTACCCTTTGATTTTTTCTTTGGGCGGATGTGGAAAGCGTCCTCCTTT
ATTTTCGTTTTTGTTTTATTTTGATCGGTTTCCGAGGGCTCTTTTCTCGA
ACGGTCGGTGCGATACCTGTTCTTTTCTTT back to topprotein sequence of EsuBft101_10a-0001 >EsuBft101_10 ID=EsuBft101_10|Name=EsuBft101_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=86bp
MEDEEEGGQWKESAKDPEVWYNKVEDGAAWFMRNWHRQEAEAFAKRQRAR
EAERSREYGLRTEEKESRGSGGGGEETATGHCCRSE back to topmRNA from alignment at Scaffold_627:566347..567126+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft101_10a-0001 ID=EsuBft101_10a-0001|Name=EsuBft101_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=780bp|location=Sequence derived from alignment at Scaffold_627:566347..567126+ (Ectocarpus subulatus male Bft15b)
AGGAGCGATGGCGGGGAGCGTGGGATACCGGGGCGGATAGAGAGCGACTG
GGTGTCTCGTGTAGGAGAGGACCTCGTGGCCTTCAACATGGAAGACGAAG
AGGAAGGGGGTCAATGGAAAGAGAGCGCCAAGGATCCGGAGGTGTGGTAC
AACAAGGTCGAGGACGGGGCGGCATGGTTCATGAGGAACTGGCACAGGCA
GGAAGCGGAAGCGTTCGCGAAGCGCCAGCGCGCGAGGGAAGCAGAAAGAA
GCAGAGAGTACGGCCTCAGGACCGAAGAGAAAGAGAGCCGGGGAAGCGGC
GGTGGGGGGGAAGAAACGGCGACCGGGCACTGCTGTAGAAGCGAGTAGGG
CGGCCGAGGCAGCACTTGTGGCGAACTATGTACCCGGCTGATGTTGTTGC
GCCCTGTTCCCCTCCCTGCTGTATGCTATACTCCTTTATGTATGTCCTTT
GTATTGCCTTCGGCCTCTGTGCTGTGTTCCTGTGTTTCTTTTTTTATTAC
CTCCCTGCCTACTCTGCTGTGTTGGGTACCGTGATCTCGCTTTGCTGTTG
CCTTTGTTTTTGTACGTCTGGCTGTCTGCCCATTTGCCGCCTCTTTGTCC
TGTTTGCTCCGTTACTCCCATGCCCTGGTGCGTAGGGCCTGGTGCTGGCA
CGTTACCCTTTGATTTTTTCTTTGGGCGGATGTGGAAAGCGTCCTCCTTT
ATTTTCGTTTTTGTTTTATTTTGATCGGTTTCCGAGGGCTCTTTTCTCGA
ACGGTCGGTGCGATACCTGTTCTTTTCTTT back to topCoding sequence (CDS) from alignment at Scaffold_627:566347..567126+ >EsuBft101_10a-0001 ID=EsuBft101_10a-0001|Name=EsuBft101_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=261bp|location=Sequence derived from alignment at Scaffold_627:566347..567126+ (Ectocarpus subulatus male Bft15b)
ATGGAAGACGAAGAGGAAGGGGGTCAATGGAAAGAGAGCGCCAAGGATCC
GGAGGTGTGGTACAACAAGGTCGAGGACGGGGCGGCATGGTTCATGAGGA
ACTGGCACAGGCAGGAAGCGGAAGCGTTCGCGAAGCGCCAGCGCGCGAGG
GAAGCAGAAAGAAGCAGAGAGTACGGCCTCAGGACCGAAGAGAAAGAGAG
CCGGGGAAGCGGCGGTGGGGGGGAAGAAACGGCGACCGGGCACTGCTGTA
GAAGCGAGTAG back to top
|