Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft101_5 |
| Protein domains | IPR000048 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Length | 181 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0031227 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft101_5a-0001 ID=EsuBft101_5a-0001|Name=EsuBft101_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1818bp|location=Sequence derived from alignment at Scaffold_627:490172..493559+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTGGGAGAGGTGAGCCTAGATCAGAAAGTCACCGATGGCTGCAGACG
ACGGGTGGGTAACCATCGACAGACTCCAATCGCTGCTTTCGCCAAGCGGG
TCCACCGATGTGCTCCGTTAGGGCTTATGGTCGTCGAGCCAGACTACGTG
GAAGGTTTTTTACCTGCACCCTTGAGACCAAAAAGGCCACGGCGATCACT
TGCTGCCAAGCTCAAGGTCCAACCGATCCCGTTCGACGGGAGCCCCAATT
CCCTACAGCCTGCAACCGAACCTGGAGCCGGACGCGCCTCCTGTCAAAGT
ATTGTGGAATCAATGCAACAGCGGCAAGGCGCTTGCGATGATCGTGGTGA
GAGGCTTGGCGACGAGTCAAGCGGGTGCGGCATCAATGGTTCCCCTCACG
GCACTGCCATTTGTAGCCCATCCCTCGACATACTGACGTACGAGTACCGA
GGACCAACGTCGTCAATACCGGAAAATCAGCCGTTACAGTCAACACCGTC
AGCCATGGACGTCAGAACTCTTGCTTCCCCTTCGTTGGAGCCGATAGGTG
GGACGAAAGTGGCGAAAGGGCATGGTGACTTGGAAATGACATCGGCGACC
CTTGGTAGCTCAAGCCGAGGTAAGCAAGTGACCGATGGGGGGACTGCGAT
GGCGTCGTTCGAAGGTGAAGGCGGGAAGGCCCCAACAAGAAGCAACGAGG
GAGCGATATTTCAAAGGAACACAACACACATGCGCGAAACTACGGGAGGT
GCTGCTATTGGGTCTGGCAGAGGGTCAGAGGCGGAGGAGGAAAACGAAGG
AGAAAACGACCCGCATATAGCGGACGGTAGCGATGCTGGGGGACGCTTTG
CTACATGGCCAGCGTCAGAAATGATCAAAGGGGCTAAAACGACATCGACG
ATGACAAAGCAGGACTTCAGGGACGTGGTCATACCGATGGCCCTTCCCGG
GGAGGCACATCAGATGGACTTTGGAGCCGCCGCGAAAGCTGTCGTTCTAG
CTTCAGGATCATCCCGGTTCAACGTTTCCAGCGCCCCATTCGTTATTTTG
CTGCACTTTTTCGAGACCTATGCGTATTCCCTGATGACTTTTCAGGTGGA
ACATTTCCGGAGATTCGGTACTGCGCGGAAAAAAACAGCGATCGGGATGA
GAAGAACTGGCTTTAACACTCGGAGGCTTACGAGTGGGATCATTTACCCC
CTTGCCGTCCTTTTCCCGAAAGGGGTTAAACAGGGTTTCACGCGAACGAT
ACGCTATACATCATTAGTCAGACCTGGAAAACCTACAGTACCTGAAAACC
CCAACTTGTCGCACAGTAATCGCGACTGTCGTAATATCAAACTTTTGATG
TCGCAGATTCAACGCGCGTGGCGGGGATACCTCGCTCGGACGGCGTTCTG
GACAGAAGGTGGCGTCGGGCTCCACGCGGTTGCCACCAGGATTCAACGGA
TCTTTCGGGGCTGGCGTGGGAAGGTCCGTGCCGTGCAAGCCTTATTGGAG
AAGAGAGCACGAGCAGCTACGGTGATTACGGCTTTGGGTCGAGGGTTCCA
AGGTCGGCAGAAGGCCAGGCGACTACGCGTGAACTGGCACAACGCGGCAG
CGGCGAAGATCCAGGGCCACTTCCGAGCACGTGCAGCAAGGAGGTGGATG
GAGCAGCTTCATCTCGTAGCGGCCATTCGGGGGGCGACGCGAGTCCAAGC
TGTCTGGAGAGGTTCTTCCGCCAGGAGACGATTCCGCGTGCTCCACTTAG
ACCAAAGCATGGAAGAGAAGTTTCTCAAAGGTGTGGGGTGGCAGGTTAAA
CTCCATTGGTCTAGCTAG back to topprotein sequence of EsuBft101_5a-0001 >EsuBft101_5 ID=EsuBft101_5|Name=EsuBft101_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=605bp
MVGEVSLDQKVTDGCRRRVGNHRQTPIAAFAKRVHRCAPLGLMVVEPDYV
EGFLPAPLRPKRPRRSLAAKLKVQPIPFDGSPNSLQPATEPGAGRASCQS
IVESMQQRQGACDDRGERLGDESSGCGINGSPHGTAICSPSLDILTYEYR
GPTSSIPENQPLQSTPSAMDVRTLASPSLEPIGGTKVAKGHGDLEMTSAT
LGSSSRGKQVTDGGTAMASFEGEGGKAPTRSNEGAIFQRNTTHMRETTGG
AAIGSGRGSEAEEENEGENDPHIADGSDAGGRFATWPASEMIKGAKTTST
MTKQDFRDVVIPMALPGEAHQMDFGAAAKAVVLASGSSRFNVSSAPFVIL
LHFFETYAYSLMTFQVEHFRRFGTARKKTAIGMRRTGFNTRRLTSGIIYP
LAVLFPKGVKQGFTRTIRYTSLVRPGKPTVPENPNLSHSNRDCRNIKLLM
SQIQRAWRGYLARTAFWTEGGVGLHAVATRIQRIFRGWRGKVRAVQALLE
KRARAATVITALGRGFQGRQKARRLRVNWHNAAAAKIQGHFRARAARRWM
EQLHLVAAIRGATRVQAVWRGSSARRRFRVLHLDQSMEEKFLKGVGWQVK
LHWSS back to topmRNA from alignment at Scaffold_627:490172..493559+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft101_5a-0001 ID=EsuBft101_5a-0001|Name=EsuBft101_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3388bp|location=Sequence derived from alignment at Scaffold_627:490172..493559+ (Ectocarpus subulatus male Bft15b)
ATGGTGGGAGAGGTGAGCCTAGATCAGAAAGTCACCGATGGCTGCAGACG
ACGGGTGGGTAACCATCGACAGACTCCAATCGCTGCTTTCGCCAAGCGGG
TCCACCGATGTGCTCCGTTAGGGCTTATGGTCGTCGAGCCAGACTACGTG
GAAGGTTTTTTACCTGCACCCTTGAGACCAAAAAGGTGAACGTTCGAGTA
CCTGGAAATCATGCCCACATTAATACAGTTTTTTTATTATCTGGTTGTGA
GAAGGTAAGTGTCCGTACATCTGGCTGGTATGAAGTGGCGTTGGGCCGTC
AAAGCCAAACTAACGGGGGGAGGGGAGAACAGCTCACAACCTACTTGCAC
GAACTACCTCGACCGCTCCCCCACATGACAGGCCACGGCGATCACTTGCT
GCCAAGCTCAAGGTCCAACCGATCCCGTTCGACGGGAGCCCCAATTCCCT
ACAGCCTGCAACCGAACCTGGAGCCGGACGCGCCTCCTGTCAAAGTATTG
TGGAATCAATGCAACAGCGGCAAGGCGCTTGCGATGATCGTGGTGAGAGG
CTTGGCGACGAGTCAAGCGGGTGCGGCATCAATGGTTCCCCTCACGGCAC
TGCCATTTGTAGCCCATCCCTCGACATACTGACGTACGAGTACCGAGGAC
CAACGTCGTCAATACCGGAAAATCAGCCGTTACAGTCAACACCGTCAGCC
ATGGACGTCAGAACTCTTGCTTCCCCTTCGTTGGAGCCGATAGGTGGGAC
GAAAGTGGCGAAAGGGCATGGTGACTTGGAAATGACATCGGCGACCCTTG
GTAGCTCAAGCCGAGGTAAGCAAGTGACCGATGGGGGGACTGCGATGGCG
TCGTTCGAAGGTGAAGGCGGGAAGGCCCCAACAAGAAGCAACGAGGGAGC
GATATTTCAAAGGAACACAACACACATGCGCGAAACTACGGGAGGTGCTG
CTATTGGGTCTGGCAGAGGGTCAGAGGCGGAGGAGGAAAACGAAGGAGAA
AACGACCCGCATATAGCGGACGGTAGCGATGCTGGGGGACGCTTTGCTAC
ATGGCCAGCGTCAGAAATGATCAAAGGGGCTAAAACGACATCGACGATGA
CAAAGCAGGACTTCAGGGACGTGGTCATACCGATGGCCCTTCCCGGGGAG
GCACATCAGATGGACTTTGGAGCCGCCGCGAAAGCTGTCGTTCTAGCTTC
AGGATCATCCCGGTTCAACGTTTCCAGGTACAACTTGGCTCGGCTAATCT
ACAATTCTTGGCAGCATCTTTCACCACGACGCCGATACTCGTATACTAAA
CACCGGAATGCTGTCGGGGAAAGGTTGGATTAGACTGCTCTTCGCTCGTC
AGGTACACCAGATGTTGTAGATGAAGGCTGTTGGCAAAATGAACGCGGTC
GGCACAACGGTAACTAGGGAACGTGCAGCAACACAGTCATGCTGGACCGA
CCTGCGGGGATATACTCACTTGGTCAGCATTACCGGGCGCAATGTTTTCT
CAAGAAAATCCTGACGCTCGTTTTATTCCGTGCCTAGCCAGCGGTTCAAA
CAACTCAACCCCCCTTGCGGCTCCGTCCCTGGCATACTCTGACCCCCACG
TGGCGCGCTTGGTGGAGGTGGACACACACGAACTACAAAAGAGAGCCCAA
CGGACCAAGTACAATAACCCCTCTCGTTGTCATGTCCCTGTTCTCAACTT
GAACGTAGACGACAGTGTGTCGCGCATTGTGTAGCGCCCCATTCGTTATT
TTGCTGCACTTTTTCGAGACCTATGCGTATTCCCTGATGACTTTTCAGGT
ATGCTCGAGGGAAGGTTTTACCATCGAGAGTTGAGCTCCCTTGGAGGCTC
CCGCTGAAACCGCCTTGGCGCACGAAGGATGGCGTCACGTTAGAGGAACA
GCGGCCGGATCGATCGGGGGAGAGGCAAGCATGGCAACGATATCGCCATC
AGCAACAGCAGCACTGGGACCTACACCACGCGGCCCTTGAGGTGAAACTA
TCATCAGGTGGAACATTTCCGGAGATTCGGTACTGCGCGGAAAAAAACAG
CGATCGGGATGAGAAGAACTGGCTTTAACACTCGGAGGCTTACGAGTGGG
ATCATTTACCCCCTTGCCGTCCTTTTCCCGAAAGGGGTTAAACAGGGTTT
CACGCGAACGATACGCTATACATCATTAGTCAGACCTGGAAAACCTACAG
TACCTGAAAACCCCAACTTGTCGCACAGTAATCGCGACTGTCGTAATATC
AAACTTTTGATGTCGCAGATTCAACGCGCGTGGCGGGGATACCTCGCTCG
GACGGCGTTCTGGACAGAAGGTGGCGTCGGGCTCCACGCGGTTGCCACCA
GGATTCAACGGATCTTTCGGGGCTGGCGTGGGAAGGTGCTGCTGGGACTT
TCGCCATGCGTTTTTTCCAAGCGGTCTTTGAAACCGAGACCTCAGAGTGC
TCCCCATCGTCACGGCTTCCCCTAGTTCGCCTGCTTTGCTTTCTGGAAAC
CCCTCCAACATTTGTGTCCGTGAGCTGAAGGTCTTCATTGGCATGAACCC
GTGGTGCGAACCGCACGAGAGTGGACTAGTTCTAGGTGAAAAGGGCGGGG
TTGTTTTTGGTACAACCTCCCCAATAGCACCGGGCGGCGCCAACGCGCCA
GCCACTTACCATCGCCGTATGGGCATTAACAGGTCCGTGCCGTGCAAGCC
TTATTGGAGAAGAGAGCACGAGCAGCTACGGTGATTACGGCTTTGGGTCG
AGGGTTCCAAGGTCGGCAGAAGGCCAGGCGACTACGCGTGAACTGGCACA
ACGCGGCAGCGGCGAAGATCCAGGGCCACTTCCGAGCACGTGCAGCAAGG
AGGTACTGCAGTAAACTCTGTGCATTCAAGGAATCGGTTGGGGCGATGAA
CTCATATTAATCAATGACATGTGGCACATGTCTCCAACTTTCACTGGTTC
AAAATGAACGAAAATTTGGAGTAGCACTGGCACTCCTGAGCGTGGCATCT
AGGTCGTCTCCTGCGAACATAAGTTACGGGGCAAGTGTGGCAGCGGCCCT
TCAATGAGTGGGGGTACGCGTGCCTGAGCACTGCGTCTCTGATTACCATG
GGTCTCTGCCCACAAAGTAGAATGCGTTCCGTACTCGTCGACATCTGCCA
AGCGGATGGTCCAGGTTCCGGGCAACGTGAAAGCTATGACGAATCACAAC
TAAAAAACGACAGGTGGATGGAGCAGCTTCATCTCGTAGCGGCCATTCGG
GGGGCGACGCGAGTCCAAGCTGTCTGGAGAGGTTCTTCCGCCAGGAGACG
ATTCCGCGTGCTCCACTTAGACCAAAGCATGGAAGAGAAGTTTCTCAAAG
GTGTGGGGTGGCAGGTTAAACTCCATTGGTCTAGCTAG back to topCoding sequence (CDS) from alignment at Scaffold_627:490172..493559+ >EsuBft101_5a-0001 ID=EsuBft101_5a-0001|Name=EsuBft101_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1818bp|location=Sequence derived from alignment at Scaffold_627:490172..493559+ (Ectocarpus subulatus male Bft15b)
ATGGTGGGAGAGGTGAGCCTAGATCAGAAAGTCACCGATGGCTGCAGACG
ACGGGTGGGTAACCATCGACAGACTCCAATCGCTGCTTTCGCCAAGCGGG
TCCACCGATGTGCTCCGTTAGGGCTTATGGTCGTCGAGCCAGACTACGTG
GAAGGTTTTTTACCTGCACCCTTGAGACCAAAAAGGCCACGGCGATCACT
TGCTGCCAAGCTCAAGGTCCAACCGATCCCGTTCGACGGGAGCCCCAATT
CCCTACAGCCTGCAACCGAACCTGGAGCCGGACGCGCCTCCTGTCAAAGT
ATTGTGGAATCAATGCAACAGCGGCAAGGCGCTTGCGATGATCGTGGTGA
GAGGCTTGGCGACGAGTCAAGCGGGTGCGGCATCAATGGTTCCCCTCACG
GCACTGCCATTTGTAGCCCATCCCTCGACATACTGACGTACGAGTACCGA
GGACCAACGTCGTCAATACCGGAAAATCAGCCGTTACAGTCAACACCGTC
AGCCATGGACGTCAGAACTCTTGCTTCCCCTTCGTTGGAGCCGATAGGTG
GGACGAAAGTGGCGAAAGGGCATGGTGACTTGGAAATGACATCGGCGACC
CTTGGTAGCTCAAGCCGAGGTAAGCAAGTGACCGATGGGGGGACTGCGAT
GGCGTCGTTCGAAGGTGAAGGCGGGAAGGCCCCAACAAGAAGCAACGAGG
GAGCGATATTTCAAAGGAACACAACACACATGCGCGAAACTACGGGAGGT
GCTGCTATTGGGTCTGGCAGAGGGTCAGAGGCGGAGGAGGAAAACGAAGG
AGAAAACGACCCGCATATAGCGGACGGTAGCGATGCTGGGGGACGCTTTG
CTACATGGCCAGCGTCAGAAATGATCAAAGGGGCTAAAACGACATCGACG
ATGACAAAGCAGGACTTCAGGGACGTGGTCATACCGATGGCCCTTCCCGG
GGAGGCACATCAGATGGACTTTGGAGCCGCCGCGAAAGCTGTCGTTCTAG
CTTCAGGATCATCCCGGTTCAACGTTTCCAGCGCCCCATTCGTTATTTTG
CTGCACTTTTTCGAGACCTATGCGTATTCCCTGATGACTTTTCAGGTGGA
ACATTTCCGGAGATTCGGTACTGCGCGGAAAAAAACAGCGATCGGGATGA
GAAGAACTGGCTTTAACACTCGGAGGCTTACGAGTGGGATCATTTACCCC
CTTGCCGTCCTTTTCCCGAAAGGGGTTAAACAGGGTTTCACGCGAACGAT
ACGCTATACATCATTAGTCAGACCTGGAAAACCTACAGTACCTGAAAACC
CCAACTTGTCGCACAGTAATCGCGACTGTCGTAATATCAAACTTTTGATG
TCGCAGATTCAACGCGCGTGGCGGGGATACCTCGCTCGGACGGCGTTCTG
GACAGAAGGTGGCGTCGGGCTCCACGCGGTTGCCACCAGGATTCAACGGA
TCTTTCGGGGCTGGCGTGGGAAGGTCCGTGCCGTGCAAGCCTTATTGGAG
AAGAGAGCACGAGCAGCTACGGTGATTACGGCTTTGGGTCGAGGGTTCCA
AGGTCGGCAGAAGGCCAGGCGACTACGCGTGAACTGGCACAACGCGGCAG
CGGCGAAGATCCAGGGCCACTTCCGAGCACGTGCAGCAAGGAGGTGGATG
GAGCAGCTTCATCTCGTAGCGGCCATTCGGGGGGCGACGCGAGTCCAAGC
TGTCTGGAGAGGTTCTTCCGCCAGGAGACGATTCCGCGTGCTCCACTTAG
ACCAAAGCATGGAAGAGAAGTTTCTCAAAGGTGTGGGGTGGCAGGTTAAA
CTCCATTGGTCTAGCTAG back to top
|