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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft329_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 271 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft329_5a-0001 ID=EsuBft329_5a-0001|Name=EsuBft329_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2715bp|location=Sequence derived from alignment at Scaffold_604:212918..216370+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCCAGGGGCTTCTCGGGGAACGGACCGCCGCCGTCTGGACAGCCCGG ACCCGGGCAGCAGCACCACCAGCAGCACCACCAACATCACCCTTACGGGC AGCCCCCGTACGGCCAAAACCAGCACCACGGGCAGCAGCAGCCGCCGCAG CAGCACCAGCAGCACCAGCAATCTGGTTACCCGGTGGGGCACTCGCAGCA GCAGCAGCAGCCGCAGCAGCACCAGCAGCGTCCCCCATACGGTCAGCAGC AACAGCAACAGCAACAGCAGCCGCGGTACGGCGGCGGCGGCGGCAGCGGC CACGCTGCTGTGGACTCGTCGACCCAGAACCCCTCCAGCTCTTCGTCCTC TGCAGGGCCATCCTCTTCGGCGACCCCGACGGCGACCGGCAGCGGCAGCG GCGCCGGCTACGCTGGTGCCGGCGGGTACGGCGGGTACGGCAGCACTGCC CCAGCCCCCGCCGGCGGCGGGGCGCCGTCGTCTTCCTCTTCTGCCACCGC TCCGGGACAGCAGCAGCAGCAGCCGCCGCCGCAAGCGTCTTCTTCTGCCG GTGGCGCCGGTTACGGCGGCCGCTCCAACCCCGCCGGCGCCGGCGCCTAC GGGCACCCCGGGACTCAGGCGGCGGCCACCGCTACGCCGTCGGCGGCGTC TTCTTCCACCGCTCACCACGGCGGGTACGGCGGCGCTGCTGCTGCTGCCG GCGGGTACGGGTCTTCTGCCCAGCAGCAGCAGCAGCACGGGAGTAGTGCT GCTGCCCCCGCGGCGGCGGCTACCCCTGCGCCGGTTGCTGCTGCGGCTGC CACTCCGGCGGCGGCAGCAGCGAGCACCACTGCTACGGCGGCCACGACGG CTGCAAGCACGGGCGGCTGGGTGTACGACCCCGTGAAGGGCTGGGTGATG GCCCCCGCGCCGGCTCCTGCGGCAGCTACGCCGGCCGCAGCCACTCCGGC GGCGGCGGTGGCGGGAGCAACGACGAAAGCGGCTTCCCCGACGACGACGA CGACGCTATCGGCGGGTTCTTCCAGGGCTAACGGCCCGGCAGTTGCGGCC ACGGCCGCCACCCCGGCCGCGACCACCTTCCAGCAGCAGCAGGCGAGTGC CTACGGCGCCTACTCCTCGTCAGGCGGGTACGCCCAGAGCGGCACGCCAG TGGCCGCGGCGGCGGCCACCGGATACGGGCAGCAGGCTAGCGCGGCCGGC TCGAACGGCGCCGCCGCTACCGCTAGCGCCCCCGGCGCTGCTGCTTCGTC TTCCGCCGCCCCCGCCGCGTCCGCTTCCCAGCCGGCGCCGGCGCCGGCGC CTTCTCCGAACGCCGCTTCTGCCGCGGCCCCCGGCGGATACTACGGGCAG CAGTACCCGCCGCAGCAGCAGCCAGGAGCGGCAGCGGCGCCTATTGCCCC AGGGCAGTACAACCCTGCCACGGGCCAGTACGCTGGCTACGGCACGACCA CCTCTGCCGCCCCTGCTCCCGCTAGCACCACAGCCGCCAGCCAGCAGCAG CAGCAGCAGACCCCCGCAGCAGTGGCCGGAAGCACCGCCCCAGCCTCCGC CTCTCCCTATGCTGCCGCGGGAGCTTCCACCACCCCGTCCGCGGCTGCCA CCCCTGGCGTTTACGGCGCGCAGCCGGCGTATGCGGGGCAGCAGCAGCAG CAGCAGCAGCAGCCTTACGGAGATCCGGCCTCCTCTCAGCAAACGACGGC GGCCCCGGGCACAGCAGTAGCGACCCCCGGTGCCACCGCCCCATCGCCGT ATACCGGGTATGGCGTAACGGCGCCGGCGCCTGTAGGGGCCCCGGCTGCT GCCACGCCGACCGGTTACGGAGCAGCGGTGACGGCTGGTGTTACCGCCAC CGACCCTGCGACGGGATACGGCACCTCGCAGCAGCAGCAGCAGCAGCAGT ACCCGGGTTACGGCGGCTACGGCGGTGCTGCCCCTACCGCCGCCGCTTCC GGGGCTTCGTCGGCGACCGGCTATGGCGCGGCGACGTCTGCATACGGGAG CTACGGAAGCTCGGCGGCTACGTCTCGAGTTGGGCAGCAGCCCGCGACGA CGACGGACGCCTCTGGACGCGGCGGAACCAGCAACAACCCGGCCGCGACC TCCTCCTCCTCCTCCTCGACCCCCGGTAGCGCCAATGGCCCCGGGTCCTC CGGAGCGGCGGCCAGCGGCGGCCGGTCCAGCCGCTTCTCGTCCTCGTCGT CGACTCCCTCCTCCTCCTCCGCCACCCAGGCCAAGTCTACCTCTGCCGCC GGTGGCGCATCGGGGTACAAGCCTAGCGCCGCTGGGAGCACCCCCGGCAG CAGCGGCGGCGGTGCGACGAAGGCCGGCTCTTCTGCTCGCGGGGGCAGCG GCGCTACGGCAACAACCCCTGCTACTGGTGCGACGGCGGCCCCCGCGTCC TCCTCGGGCAACGCCAGCGGTGGGAGCAGCGGCGGCCTTGGCAAGACCGC GGACCCACTCGCGTCGGCGGCGGCGGCGTATGCCGCTCAGCAGGCCGCTG CCTCTGCGGCCCCGTCTTCGGCGCTCGTGTCGTCGTCGTCGTCGTCCATG AACCCGCCTCCCGCTACCGGGGGTTACATGCAGCAGCCGGGCGGCGGCGC CGGCGGCGGTGGGTACGGGATGCCCACCACGGCGCCGGCGGCGGTGCCGG GGGCGCAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAGCCGTATGGG CAGGTGGGAATGTGA back to topprotein sequence of EsuBft329_5a-0001 >EsuBft329_5 ID=EsuBft329_5|Name=EsuBft329_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=904bp
MSRGFSGNGPPPSGQPGPGQQHHQQHHQHHPYGQPPYGQNQHHGQQQPPQ QHQQHQQSGYPVGHSQQQQQPQQHQQRPPYGQQQQQQQQQPRYGGGGGSG HAAVDSSTQNPSSSSSSAGPSSSATPTATGSGSGAGYAGAGGYGGYGSTA PAPAGGGAPSSSSSATAPGQQQQQPPPQASSSAGGAGYGGRSNPAGAGAY GHPGTQAAATATPSAASSSTAHHGGYGGAAAAAGGYGSSAQQQQQHGSSA AAPAAAATPAPVAAAAATPAAAAASTTATAATTAASTGGWVYDPVKGWVM APAPAPAAATPAAATPAAAVAGATTKAASPTTTTTLSAGSSRANGPAVAA TAATPAATTFQQQQASAYGAYSSSGGYAQSGTPVAAAAATGYGQQASAAG SNGAAATASAPGAAASSSAAPAASASQPAPAPAPSPNAASAAAPGGYYGQ QYPPQQQPGAAAAPIAPGQYNPATGQYAGYGTTTSAAPAPASTTAASQQQ QQQTPAAVAGSTAPASASPYAAAGASTTPSAAATPGVYGAQPAYAGQQQQ QQQQPYGDPASSQQTTAAPGTAVATPGATAPSPYTGYGVTAPAPVGAPAA ATPTGYGAAVTAGVTATDPATGYGTSQQQQQQQYPGYGGYGGAAPTAAAS GASSATGYGAATSAYGSYGSSAATSRVGQQPATTTDASGRGGTSNNPAAT SSSSSSTPGSANGPGSSGAAASGGRSSRFSSSSSTPSSSSATQAKSTSAA GGASGYKPSAAGSTPGSSGGGATKAGSSARGGSGATATTPATGATAAPAS SSGNASGGSSGGLGKTADPLASAAAAYAAQQAAASAAPSSALVSSSSSSM NPPPATGGYMQQPGGGAGGGGYGMPTTAPAAVPGAQQQQQQQQQQQQPYG QVGM back to topmRNA from alignment at Scaffold_604:212918..216370+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft329_5a-0001 ID=EsuBft329_5a-0001|Name=EsuBft329_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3453bp|location=Sequence derived from alignment at Scaffold_604:212918..216370+ (Ectocarpus subulatus male Bft15b) ATGTCCAGGGGCTTCTCGGGGAACGGACCGCCGCCGTCTGGACAGCCCGG
ACCCGGGCAGCAGCACCACCAGCAGCACCACCAACATCACCCTTACGGGC
AGCCCCCGTACGGCCAAAACCAGCACCACGGGCAGCAGCAGCCGCCGCAG
CAGCACCAGCAGCACCAGCAATCTGGTTACCCGGTGGGGCACTCGCAGCA
GCAGCAGCAGCCGCAGCAGCACCAGCAGCGTCCCCCATACGGTCAGCAGC
AACAGCAACAGCAACAGCAGCCGCGGTACGGCGGCGGCGGCGGCAGCGGC
CACGCTGCTGTGGACTCGTCGACCCAGAACCCCTCCAGCTCTTCGTCCTC
TGCAGGGCCATCCTCTTCGGCGACCCCGACGGCGACCGGCAGCGGCAGCG
GCGCCGGCTACGCTGGTGCCGGCGGGTACGGCGGGTACGGCAGCACTGCC
CCAGCCCCCGCCGGCGGCGGGGCGCCGTCGTCTTCCTCTTCTGCCACCGC
TCCGGGACAGCAGCAGCAGCAGCCGCCGCCGCAAGCGTCTTCTTCTGCCG
GTGGCGCCGGTTACGGCGGCCGCTCCAACCCCGCCGGCGCCGGCGCCTAC
GGGCACCCCGGGACTCAGGCGGCGGCCACCGCTACGCCGTCGGCGGCGTC
TTCTTCCACCGCTCACCACGGCGGGTACGGCGGCGCTGCTGCTGCTGCCG
GCGGGTACGGGTCTTCTGCCCAGCAGCAGCAGCAGCACGGGAGTAGTGCT
GCTGCCCCCGCGGCGGCGGCTACCCCTGCGCCGGTTGCTGCTGCGGCTGC
CACTCCGGCGGCGGCAGCAGCGAGCACCACTGCTACGGCGGCCACGACGG
CTGCAAGCACGGGCGGCTGGGTGTACGACCCCGTGAAGGGCTGGGTGATG
GCCCCCGCGCCGGCTCCTGCGGCAGCTACGCCGGCCGCAGCCACTCCGGC
GGCGGCGGTGGCGGGAGCAACGACGAAAGCGGCTTCCCCGACGACGACGA
CGACGCTATCGGCGGGTTCTTCCAGGGCTAACGGCCCGGCAGTTGCGGCC
ACGGCCGCCACCCCGGCCGCGACCACCTTCCAGCAGCAGCAGGCGAGTGC
CTACGGCGCCTACTCCTCGTCAGGCGGGTACGCCCAGAGCGGCACGCCAG
TGGCCGCGGCGGCGGCCACCGGATACGGGCAGCAGGCTAGCGCGGCCGGC
TCGAACGGCGCCGCCGCTACCGCTAGCGCCCCCGGCGCTGCTGCTTCGTC
TTCCGCCGCCCCCGCCGCGTCCGCTTCCCAGCCGGCGCCGGCGCCGGCGC
CTTCTCCGAACGCCGCTTCTGCCGCGGCCCCCGGCGGATACTACGGGCAG
CAGTACCCGCCGCAGCAGCAGCCAGGAGCGGCAGCGGCGCCTATTGCCCC
AGGGCAGTACAACCCTGCCACGGGCCAGTACGCTGGCTACGGCACGACCA
CCTCTGCCGCCCCTGCTCCCGCTAGCACCACAGCCGCCAGCCAGCAGCAG
CAGCAGCAGACCCCCGCAGCAGTGGCCGGAAGCACCGCCCCAGCCTCCGC
CTCTCCCTATGCTGCCGCGGGAGCTTCCACCACCCCGTCCGCGGCTGCCA
CCCCTGGCGTTTACGGCGCGCAGCCGGCGTATGCGGGGCAGCAGCAGCAG
CAGCAGCAGCAGCCTTACGGAGATCCGGCCTCCTCTCAGCAAACGACGGC
GGCCCCGGGCACAGCAGTAGCGACCCCCGGTGCCACCGCCCCATCGCCGT
ATACCGGGTATGGCGTAACGGCGCCGGCGCCTGTAGGGGCCCCGGCTGCT
GCCACGCCGACCGGTTACGGAGCAGCGGTGACGGCTGGTGTTACCGCCAC
CGACCCTGCGACGGGATACGGCACCTCGCAGCAGCAGCAGCAGCAGCAGT
ACCCGGGTTACGGCGGCTACGGCGGTGCTGCCCCTACCGCCGCCGCTTCC
GGGGCTTCGTCGGCGACCGGCTATGGCGCGGCGACGTCTGCATACGGGAG
CTACGGAAGCTCGGCGGCTACGTCTCGAGTTGGGCAGCAGGTGAGCACGC
CCTTGCTGTCTTTGGTTGTCGATCTGACGCCCGATCCGAAGTGGTAACAC
CGGACTTGCATGTATATTCCTTTCTGGAGAGGAAACCCGCTAGCGCCAGC
GCCCTGTTGATTTCTTGGTTCTTTCGTGTGGATCGTAGCCTGGGCCGGCG
AGAACCCGCTACATTCCGGCATGGTGGTGATTCGAGGTCTATGGTCTAGC
GACTACAAGGCGTGCGTTTTCATGAGACCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCCCCCCCTCCCACCGCCGTCATCTGTGTGTTTTGTGTCTCTTGG
ATCGACCGCGCTGACGGCCTGACCAATGCATGTGCGTGTTTTTCTATCTT
TCACGTCGACAGTGCTTACCGGCTGACCAATGTGTGTTTGTGTGTGTGTT
GATTATTTGTAACGACCCCGCGAACCGGCCTGCGTATGCATACGTGTGAC
TTTTATCTCATTATTTACATCGATGGCGCTAACCGGCTGACCGATGAGCG
TGTGTGTGTTTTTTTTTTCCATCGCGGACGTGCTGTGCTGCCGCGACCAA
AAAAAAAAAAATCAGCCCGCGACGACGACGGACGCCTCTGGACGCGGCGG
AACCAGCAACAACCCGGCCGCGACCTCCTCCTCCTCCTCCTCGACCCCCG
GTAGCGCCAATGGCCCCGGGTCCTCCGGAGCGGCGGCCAGCGGCGGCCGG
TCCAGCCGCTTCTCGTCCTCGTCGTCGACTCCCTCCTCCTCCTCCGCCAC
CCAGGCCAAGTCTACCTCTGCCGGTGGCGCATCGGGGTACAAGCCTGGTG
CCAGCAGCAGCAGCAACAGCAACAGCAGCAGGGGAGCCGGTGGCGCATCG
GGGTACAAGCCTAGCGCCGCTGGGAGCACCCCCGGCAGCAGCGGCGGCGG
TGCGACGAAGGCCGGCTCTTCTGCTCGCGGGGGCAGCGGCGCTACGGCAA
CAACCCCTGCTACTGGTGCGACGGCGGCCCCCGCGTCCTCCTCGGGCAAC
GCCAGCGGTGGGAGCAGCGGCGGCCTTGGCAAGACCGCGGACCCACTCGC
GTCGGCGGCGGCGGCGTATGCCGCTCAGCAGGCCGCTGCCTCTGCGGCCC
CGTCTTCGGCGCTCGTGTCGTCGTCGTCGTCGTCCATGAACCCGCCTCCC
GCTACCGGGGGTTACATGCAGCAGCCGGGCGGCGGCGCCGGCGGCGGTGG
GTACGGGATGCCCACCACGGCGCCGGCGGCGGTGCCGGGGGCGCAGCAGC
AACAGCAGCAACAGCAGCAACAGCAGCAGCCGTATGGGCAGGTGGGAATG
TGA back to topCoding sequence (CDS) from alignment at Scaffold_604:212918..216370+ >EsuBft329_5a-0001 ID=EsuBft329_5a-0001|Name=EsuBft329_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2715bp|location=Sequence derived from alignment at Scaffold_604:212918..216370+ (Ectocarpus subulatus male Bft15b) ATGTCCAGGGGCTTCTCGGGGAACGGACCGCCGCCGTCTGGACAGCCCGG ACCCGGGCAGCAGCACCACCAGCAGCACCACCAACATCACCCTTACGGGC AGCCCCCGTACGGCCAAAACCAGCACCACGGGCAGCAGCAGCCGCCGCAG CAGCACCAGCAGCACCAGCAATCTGGTTACCCGGTGGGGCACTCGCAGCA GCAGCAGCAGCCGCAGCAGCACCAGCAGCGTCCCCCATACGGTCAGCAGC AACAGCAACAGCAACAGCAGCCGCGGTACGGCGGCGGCGGCGGCAGCGGC CACGCTGCTGTGGACTCGTCGACCCAGAACCCCTCCAGCTCTTCGTCCTC TGCAGGGCCATCCTCTTCGGCGACCCCGACGGCGACCGGCAGCGGCAGCG GCGCCGGCTACGCTGGTGCCGGCGGGTACGGCGGGTACGGCAGCACTGCC CCAGCCCCCGCCGGCGGCGGGGCGCCGTCGTCTTCCTCTTCTGCCACCGC TCCGGGACAGCAGCAGCAGCAGCCGCCGCCGCAAGCGTCTTCTTCTGCCG GTGGCGCCGGTTACGGCGGCCGCTCCAACCCCGCCGGCGCCGGCGCCTAC GGGCACCCCGGGACTCAGGCGGCGGCCACCGCTACGCCGTCGGCGGCGTC TTCTTCCACCGCTCACCACGGCGGGTACGGCGGCGCTGCTGCTGCTGCCG GCGGGTACGGGTCTTCTGCCCAGCAGCAGCAGCAGCACGGGAGTAGTGCT GCTGCCCCCGCGGCGGCGGCTACCCCTGCGCCGGTTGCTGCTGCGGCTGC CACTCCGGCGGCGGCAGCAGCGAGCACCACTGCTACGGCGGCCACGACGG CTGCAAGCACGGGCGGCTGGGTGTACGACCCCGTGAAGGGCTGGGTGATG GCCCCCGCGCCGGCTCCTGCGGCAGCTACGCCGGCCGCAGCCACTCCGGC GGCGGCGGTGGCGGGAGCAACGACGAAAGCGGCTTCCCCGACGACGACGA CGACGCTATCGGCGGGTTCTTCCAGGGCTAACGGCCCGGCAGTTGCGGCC ACGGCCGCCACCCCGGCCGCGACCACCTTCCAGCAGCAGCAGGCGAGTGC CTACGGCGCCTACTCCTCGTCAGGCGGGTACGCCCAGAGCGGCACGCCAG TGGCCGCGGCGGCGGCCACCGGATACGGGCAGCAGGCTAGCGCGGCCGGC TCGAACGGCGCCGCCGCTACCGCTAGCGCCCCCGGCGCTGCTGCTTCGTC TTCCGCCGCCCCCGCCGCGTCCGCTTCCCAGCCGGCGCCGGCGCCGGCGC CTTCTCCGAACGCCGCTTCTGCCGCGGCCCCCGGCGGATACTACGGGCAG CAGTACCCGCCGCAGCAGCAGCCAGGAGCGGCAGCGGCGCCTATTGCCCC AGGGCAGTACAACCCTGCCACGGGCCAGTACGCTGGCTACGGCACGACCA CCTCTGCCGCCCCTGCTCCCGCTAGCACCACAGCCGCCAGCCAGCAGCAG CAGCAGCAGACCCCCGCAGCAGTGGCCGGAAGCACCGCCCCAGCCTCCGC CTCTCCCTATGCTGCCGCGGGAGCTTCCACCACCCCGTCCGCGGCTGCCA CCCCTGGCGTTTACGGCGCGCAGCCGGCGTATGCGGGGCAGCAGCAGCAG CAGCAGCAGCAGCCTTACGGAGATCCGGCCTCCTCTCAGCAAACGACGGC GGCCCCGGGCACAGCAGTAGCGACCCCCGGTGCCACCGCCCCATCGCCGT ATACCGGGTATGGCGTAACGGCGCCGGCGCCTGTAGGGGCCCCGGCTGCT GCCACGCCGACCGGTTACGGAGCAGCGGTGACGGCTGGTGTTACCGCCAC CGACCCTGCGACGGGATACGGCACCTCGCAGCAGCAGCAGCAGCAGCAGT ACCCGGGTTACGGCGGCTACGGCGGTGCTGCCCCTACCGCCGCCGCTTCC GGGGCTTCGTCGGCGACCGGCTATGGCGCGGCGACGTCTGCATACGGGAG CTACGGAAGCTCGGCGGCTACGTCTCGAGTTGGGCAGCAGCCCGCGACGA CGACGGACGCCTCTGGACGCGGCGGAACCAGCAACAACCCGGCCGCGACC TCCTCCTCCTCCTCCTCGACCCCCGGTAGCGCCAATGGCCCCGGGTCCTC CGGAGCGGCGGCCAGCGGCGGCCGGTCCAGCCGCTTCTCGTCCTCGTCGT CGACTCCCTCCTCCTCCTCCGCCACCCAGGCCAAGTCTACCTCTGCCGCC GGTGGCGCATCGGGGTACAAGCCTAGCGCCGCTGGGAGCACCCCCGGCAG CAGCGGCGGCGGTGCGACGAAGGCCGGCTCTTCTGCTCGCGGGGGCAGCG GCGCTACGGCAACAACCCCTGCTACTGGTGCGACGGCGGCCCCCGCGTCC TCCTCGGGCAACGCCAGCGGTGGGAGCAGCGGCGGCCTTGGCAAGACCGC GGACCCACTCGCGTCGGCGGCGGCGGCGTATGCCGCTCAGCAGGCCGCTG CCTCTGCGGCCCCGTCTTCGGCGCTCGTGTCGTCGTCGTCGTCGTCCATG AACCCGCCTCCCGCTACCGGGGGTTACATGCAGCAGCCGGGCGGCGGCGC CGGCGGCGGTGGGTACGGGATGCCCACCACGGCGCCGGCGGCGGTGCCGG GGGCGCAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAGCCGTATGGG CAGGTGGGAATGTGA back to top
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