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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FZI9 |
| ProteomeId | EsuBft329_22 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Max annot lvl | 2759|Eukaryota |
| Length | 164 |
| Hectar predicted targeting category | other localisation |
| Evalue | 4.56e-57 |
| EggNOG OGs | KOG1166@1|root,KOG1166@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG ko | ko:K02178 |
| KEGG Pathway | ko04110,ko04111,ko04113,ko04114,ko04914,map04110,map04111,map04113,map04114,map04914 |
| EC | 2.7.11.1 |
| Description | meiotic sister chromatid cohesion, centromeric |
| COG category | S |
| BRITE | ko00000,ko00001,ko01000,ko01001,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft329_22a-0001 ID=EsuBft329_22a-0001|Name=EsuBft329_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1641bp|location=Sequence derived from alignment at Scaffold_604:15597..19504- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAACGAGAAGGCCGCGAACGCGGACGAGCGACGGCTTGCGAGGTCCAA
CCAGGAGCTATTGGCCTCTGACCGGGAAGAGAAGGAGGAGGAACATGATG
ATCAGGTGGAAGAGGCCCGCGCAAGATATGTTGCCGAGCAGCAACAAGAA
CCCAATGCCGCCCACACACAAGCCCCCTCCCCCACGGCTGTGGAGATGGA
CATCTGTCCTACCGACTCGGACAATGACGACGACGATGACGGCAGAGGCG
ACGGCGTGAGAGCGGCTTTACGTGCCGGCAAGCTAGCGGAGGAGACGGGT
ATTGCTAGCGGCAGCGGTAGCGGCGGCGGCGGTGCCGGCGGTGGTGGGGT
TGGCGGGAGCGGCTTTAGGCAGCCGGTGTTCGGAGGAGAGGACAACAATA
ACGCCAACGCTGTCGCAGGGTTTAGGAGGCGGTTGTCTCCGTCGCCGCAG
TCGTCGTCGCCGCCGTCGATGCCAGCGGCTGCGGCTGCGGCTGTGGCTGC
GGCGGCAGGGGGTGTCGCTGACGATTTTCCCAGGGACGGCGCCGCTGGGG
GTCGCGTCGATGGGAGCGACGAGCCGGAGCGGGAGGACGACGGCGGCGCC
GGCAGGAGGAGGAAGTTCCGCCAGCCTGTTTTCGACGGTGACGGGGACGA
CAACCACCATCCCGCTGACGCTGCTGGCGCCGCCGCCGCTTTTTCCGCCG
GGTGCTCCGGTCAGTCGGCGGCGGTGGCGACGGCGGCCTTTAGCGGGGAC
AGCAGCGGCGGTGGCGGCGGCGAGAAGATTACCGCGCTGCCGGAGGCGGT
GTCAGACGAGAACGCCGCCCCCGTAGCAGCAGCAGCAGCAGCAGCAGCAG
CGGCACCACCCGCCGCCGCCGGCGCTCGACCGCCACTGGCTGGAGTTCTC
CGGGAGGCCGGTGCTCCCCCCGGCGTTAGCGGCGGTGTCGGCGAAAATGG
AAGGCGTTTCTACGGTGTGGATGGTGATGATGTTCCGAGGGGCAATCCTT
CTGGTCGCGGAAACCTTTCCCCCGATGGCGGCGGCGCCGGCGGGTCGGAG
AACAACGATGGTGTAGTCGGCGGCGGCGGAAGGTACGGAGAGCCTGCTGT
ACCGGCCACTGCTGCTGCTGCTGCTGTTGACGCGGCCGCCGCTGCTGCGG
CGGCGGGAGGAAACCCTAACAACGCCAGCCTGAGCAATGCCTCCGTGATG
TTTGTCAATCCGCGAGAGGCGGAATGCGGAGGAGGAGGAGGGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGCGGAAGAGACTGCTGAGGCAAGGGGAGGGC
TGCAGAGGAGGCTAACGTTCGGTCACGCGGGGGGAGCGGCGGCGGCGCCG
TCCGTCAGAGGGGAGGGAAAGCCTGTTGGTGCTGCTGCTGCTGCTGCTGC
TGTTGTCGCTGCCGGTGGGGGTGGTGAAGACACCGCGGAGGAGGCAAAGG
ACGGAGAGGAGGAAGACATGACGATCAACACCAAGCTCGTGTGGGAAGAG
TTTTCGGCGTGGTTCGGCGAAGACGACGAAGAAGACGGGGGAGACGTCGA
TGGCGCGTTCGGGGAGGAGGGGGGGATGCTGCTACAAGAGCAAGGGTCTA
ACAAGCGCTGTGAGTGTGGGACGGTAGAGGCTCCTGTTTAG back to topprotein sequence of EsuBft329_22a-0001 >EsuBft329_22 ID=EsuBft329_22|Name=EsuBft329_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=546bp
MNEKAANADERRLARSNQELLASDREEKEEEHDDQVEEARARYVAEQQQE
PNAAHTQAPSPTAVEMDICPTDSDNDDDDDGRGDGVRAALRAGKLAEETG
IASGSGSGGGGAGGGGVGGSGFRQPVFGGEDNNNANAVAGFRRRLSPSPQ
SSSPPSMPAAAAAAVAAAAGGVADDFPRDGAAGGRVDGSDEPEREDDGGA
GRRRKFRQPVFDGDGDDNHHPADAAGAAAAFSAGCSGQSAAVATAAFSGD
SSGGGGGEKITALPEAVSDENAAPVAAAAAAAAAAPPAAAGARPPLAGVL
REAGAPPGVSGGVGENGRRFYGVDGDDVPRGNPSGRGNLSPDGGGAGGSE
NNDGVVGGGGRYGEPAVPATAAAAAVDAAAAAAAAGGNPNNASLSNASVM
FVNPREAECGGGGGAAAAAAAAAAEETAEARGGLQRRLTFGHAGGAAAAP
SVRGEGKPVGAAAAAAAVVAAGGGGEDTAEEAKDGEEEDMTINTKLVWEE
FSAWFGEDDEEDGGDVDGAFGEEGGMLLQEQGSNKRCECGTVEAPV back to topmRNA from alignment at Scaffold_604:15597..19504- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft329_22a-0001 ID=EsuBft329_22a-0001|Name=EsuBft329_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3908bp|location=Sequence derived from alignment at Scaffold_604:15597..19504- (Ectocarpus subulatus male Bft15b)
ATGGTAGCTCGCGGAATGTACAACGTTTTGAGGGGTATCAACCTTAAGGA
GTTCCCCGACTTAAGGAAACCTGTTGAAACCACAAATCCTGTGCGTCATT
AGCGGACGGACGATTGTATCCACTCCCAGCTTGTATTTTTTTTTTCGGTG
TTGTCGCCGTTGTGTATTTTCTTTTTTTTACATATATATATATATATTTT
ATTTCCAGAACGAGAAGGCCGCGAACGCGGACGAGCGACGGCTTGCGAGG
TCCAACCAGGAGCTATTGGCCTCTGACCGGGAAGAGAAGGAGGAGGAACA
TGATGATCAGGTGGAAGAGGTGAGACAGCGCAGCGGCTGATGGCGGCTTT
GTTGTTACCGAAAATGACACAAGATAACACACCCCCTGGACCGATTTTCA
AAGCTCGATTACTCCACGACGAAGAGGATGCATAAACGAAACGATACATT
TTTGGAAAGCTCTCGACGAGACGGTTCCAACGCCGCCGTTTTCGGCGCTG
TGACTCTTTCTGTTGTTGAGAAATCGAGATTTGAAAATCGGTCCAGGGGG
TGTGTTATCTTGGGTCATTTACGGTATGCGGTGGGTGGTTGTGCTGAAGG
TGGTGTTCGTGTCTGTGGATGGCTGTGTTGTATTTGGGCGGCGATTCATT
GGTCTTTTGCGGTATTTTGAGAGTCGTCGTTTTGTCAGGAGACATGTACA
TGTATTTAGCCCGGGCGCCTGTGTTGGTGATGACTATATTCCTTGATGTC
AATTTGATCACGTTTTTTTTTTTTGCTTTACTTCCTTGTGGTGACGATTT
CTTCTTTTGTGTCGTTTTTTGATGATTCGTTTTTCTTTTCTCGTTTTGGT
GACGTTTCTTTTTTTTCTTTTTTGTCGTTGTGATGACTGAAGGTGGCGTG
GTGCATGTTGTTGGCCGCGCTATTGCTCTGCGACATTTCCATCAGAAGCG
ATATTTTTTCAGGAGACAGCAGACGCTGGTCTGGTTTGCTCCCTTCGAAG
CAGTGGTATTTGTAATGAAGGCACCATGGTGTCATCGTAAGGTTAGGGGA
TATCAACGCCGGTGTGCTCTCTTTGTTGCCATTCATCGCCTTGGCTGCTT
GACCGAACACTGTCTTTTGTCTTTGGAGCGGTGGTACGGCACGGTTGTGT
TTGTATCGTGTAAGCGTAGGTTGTGCGCTTGCTCTCTGTGGTATTGTTGG
TGGCCGTGGCCGCGTGACGGCCGCGTCCACCACACACCGTTCCATTCGTC
CCAAGTGAACTAACTGCCTTCGCGATGATTTTTTTGTCCATCTGTGAATG
CTGTACATGTAGAGGAAGGAGTGTTGTGCCCCTGTCCCGAACCCCCTAAC
CCCTGTTGAAACCAAGCTATCTATCCACGCGAAGGATACTGTCTTCAGTG
GCGTATTTTGATATTTTACTCCTCGACTCCCCCCCCTCTTTGGAGCTTGG
GCGGGCGAAGGCCCGGGACATCGCTCCGTCCCGGCTTTGTAGGCATGCAA
TGTCATATGGTCTAACGAATATAAAACGGCATGCACGACGATGAGTATCC
TCCCACCCCCCCGCCGTCCTTTTACGCGTCACGCCCCGCTGGTTCAAAAT
AGGCCCGCGCAAGATATGTTGCCGAGCAGCAACAAGAACCCAATGCCGCC
CACACACAAGCCCCCTCCCCCACGGCTGTGGAGATGGACATCTGTCCTAC
CGACTCGGACAATGACGACGACGATGACGGCAGAGGCGACGGCGTGAGAG
CGGCTTTACGTGCCGGCAAGCTAGCGGAGGAGACGGGTATTGCTAGCGGC
AGCGGTAGCGGCGGCGGCGGTGCCGGCGGTGGTGGGGTTGGCGGGAGCGG
CTTTAGGCAGCCGGTGTTCGGAGGAGAGGACAACAATAACGCCAACGCTG
TCGCAGGGTTTAGGAGGCGGTTGTCTCCGTCGCCGCAGTCGTCGTCGCCG
CCGTCGATGCCAGCGGCTGCGGCTGCGGCTGTGGCTGCGGCGGCAGGGGG
TGTCGCTGACGATTTTCCCAGGGACGGCGCCGCTGGGGGTCGCGTCGATG
GGAGCGACGAGCCGGAGCGGGAGGACGACGGCGGCGCCGGCAGGAGGAGG
AAGTTCCGCCAGCCTGTTTTCGACGGTGACGGGGACGACAACCACCATCC
CGCTGACGCTGCTGGCGCCGCCGCCGCTTTTTCCGCCGGGTGCTCCGGTC
AGTCGGCGGCGGTGGCGACGGCGGCCTTTAGCGGGGACAGCAGCGGCGGT
GGCGGCGGCGAGAAGATTACCGCGCTGCCGGAGGCGGTGTCAGACGAGAA
CGCCGCCCCCGTAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCACCACCCG
CCGCCGCCGGCGCTCGACCGCCACTGGCTGGAGTTCTCCGGGAGGCCGGT
GCTCCCCCCGGCGTTAGCGGCGGTGTCGGCGAAAATGGAAGGCGTTTCTA
CGGTGTGGATGGTGATGATGTTCCGAGGGGCAATCCTTCTGGTCGCGGAA
ACCTTTCCCCCGATGGCGGCGGCGCCGGCGGGTCGGAGAACAACGATGGT
GTAGTCGGCGGCGGCGGAAGGTACGGAGAGCCTGCTGTACCGGCCACTGC
TGCTGCTGCTGCTGTTGACGCGGCCGCCGCTGCTGCGGCGGCGGGAGGAA
ACCCTAACAACGCCAGCCTGAGCAATGCCTCCGTGATGTTTGTCAATCCG
CGAGAGGCGGAATGCGGAGGAGGAGGAGGGGCGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGAAGAGACTGCTGAGGCAAGGGGAGGGCTGCAGAGGAGGC
TAACGTTCGGTCACGCGGGGGGAGCGGCGGCGGCGCCGTCCGTCAGAGGG
GAGGGAAAGCCTGTTGGTGCTGCTGCTGCTGCTGCTGCTGTTGTCGCTGC
CGGTGGGGGTGGTGAAGACACCGCGGAGGAGGCAAAGGTTAGCATGTCGT
GTGTTGGAAGACTTGCGTGTTAAGGCGTGTACAATATACGTTTTTTTTGT
CTTGGGCGTTATCACTCTAGTAGCAGTATGCGTATTCGAACTGTTTTTCT
CAAGCGAATGTAGTGTGAGAATAGTTGTGGGTCAGGGAGGCGGGAGATTT
TGTGAAAAAGGCGTAGATAGTACCGTAGGTTGCACGACTCAAGATAACAC
ACCCTCTTTTTTGCCGATGTTCTAAGCTCGACTACGTCGCCCACGAAGAT
GATGATGCCGAAATCAAACGAAACGTTTCGGAAGCATCTCGACGAGACGG
TTCCAACGCCGCCATTTTCGATACCGCCACTGGATTGGATCGAGTCATGA
AGATCGATCCAGGGGGTGTGATATCTTGTGTCATATACGGTATTCATGTC
TGGAAGGTTTCAGTTGGGCCGTCTTGGCGAGAAAATGCGAGTACGGGGAA
ATAGCAGACGCAGGGCGTACGCAGACTCTTCTCCTTATCCCTATCCCGGA
CCCTATCCCAACTTCCCGATTGCCTTCTTTTTTGAACACGTTTGCTTAAT
CGACAAACCTTGCGACTGCTGCTTTTTCAGTCTGGTGGCGGTCGGCCTGC
TTTTTCTCACGCGAAAATATTATTTGGAGGAAGCCACAAACACAACAGAC
AAGCACATCAACAGCTACAACACTGCCACCAGCGGCAACAGCCAATATAC
CACAAAAAACATTACACAATAGAAGCATTTTAAACTAAATCCAGAAACAA
CATTTTTACAACGCAGGACGGAGAGGAGGAAGACATGACGATCAACACCA
AGCTCGTGTGGGAAGAGTTTTCGGCGTGGTTCGGCGAAGACGACGAAGAA
GACGGGGGAGACGTCGATGGCGCGTTCGGGGAGGAGGGGGGGATGCTGCT
ACAAGAGCAAGGGTCTAACAAGCGCTGTGAGTGTGGGACGGTAGAGGCTC
CTGTTTAG back to topCoding sequence (CDS) from alignment at Scaffold_604:15597..19504- >EsuBft329_22a-0001 ID=EsuBft329_22a-0001|Name=EsuBft329_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1641bp|location=Sequence derived from alignment at Scaffold_604:15597..19504- (Ectocarpus subulatus male Bft15b)
ATGAACGAGAAGGCCGCGAACGCGGACGAGCGACGGCTTGCGAGGTCCAA
CCAGGAGCTATTGGCCTCTGACCGGGAAGAGAAGGAGGAGGAACATGATG
ATCAGGTGGAAGAGGCCCGCGCAAGATATGTTGCCGAGCAGCAACAAGAA
CCCAATGCCGCCCACACACAAGCCCCCTCCCCCACGGCTGTGGAGATGGA
CATCTGTCCTACCGACTCGGACAATGACGACGACGATGACGGCAGAGGCG
ACGGCGTGAGAGCGGCTTTACGTGCCGGCAAGCTAGCGGAGGAGACGGGT
ATTGCTAGCGGCAGCGGTAGCGGCGGCGGCGGTGCCGGCGGTGGTGGGGT
TGGCGGGAGCGGCTTTAGGCAGCCGGTGTTCGGAGGAGAGGACAACAATA
ACGCCAACGCTGTCGCAGGGTTTAGGAGGCGGTTGTCTCCGTCGCCGCAG
TCGTCGTCGCCGCCGTCGATGCCAGCGGCTGCGGCTGCGGCTGTGGCTGC
GGCGGCAGGGGGTGTCGCTGACGATTTTCCCAGGGACGGCGCCGCTGGGG
GTCGCGTCGATGGGAGCGACGAGCCGGAGCGGGAGGACGACGGCGGCGCC
GGCAGGAGGAGGAAGTTCCGCCAGCCTGTTTTCGACGGTGACGGGGACGA
CAACCACCATCCCGCTGACGCTGCTGGCGCCGCCGCCGCTTTTTCCGCCG
GGTGCTCCGGTCAGTCGGCGGCGGTGGCGACGGCGGCCTTTAGCGGGGAC
AGCAGCGGCGGTGGCGGCGGCGAGAAGATTACCGCGCTGCCGGAGGCGGT
GTCAGACGAGAACGCCGCCCCCGTAGCAGCAGCAGCAGCAGCAGCAGCAG
CGGCACCACCCGCCGCCGCCGGCGCTCGACCGCCACTGGCTGGAGTTCTC
CGGGAGGCCGGTGCTCCCCCCGGCGTTAGCGGCGGTGTCGGCGAAAATGG
AAGGCGTTTCTACGGTGTGGATGGTGATGATGTTCCGAGGGGCAATCCTT
CTGGTCGCGGAAACCTTTCCCCCGATGGCGGCGGCGCCGGCGGGTCGGAG
AACAACGATGGTGTAGTCGGCGGCGGCGGAAGGTACGGAGAGCCTGCTGT
ACCGGCCACTGCTGCTGCTGCTGCTGTTGACGCGGCCGCCGCTGCTGCGG
CGGCGGGAGGAAACCCTAACAACGCCAGCCTGAGCAATGCCTCCGTGATG
TTTGTCAATCCGCGAGAGGCGGAATGCGGAGGAGGAGGAGGGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGCGGAAGAGACTGCTGAGGCAAGGGGAGGGC
TGCAGAGGAGGCTAACGTTCGGTCACGCGGGGGGAGCGGCGGCGGCGCCG
TCCGTCAGAGGGGAGGGAAAGCCTGTTGGTGCTGCTGCTGCTGCTGCTGC
TGTTGTCGCTGCCGGTGGGGGTGGTGAAGACACCGCGGAGGAGGCAAAGG
ACGGAGAGGAGGAAGACATGACGATCAACACCAAGCTCGTGTGGGAAGAG
TTTTCGGCGTGGTTCGGCGAAGACGACGAAGAAGACGGGGGAGACGTCGA
TGGCGCGTTCGGGGAGGAGGGGGGGATGCTGCTACAAGAGCAAGGGTCTA
ACAAGCGCTGTGAGTGTGGGACGGTAGAGGCTCCTGTTTAG back to top
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