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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LR02 |
| ProteomeId | EsuBft1020_10 |
| Protein domains | IPR007657 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | egf domain-specific o-linked n-acetylglucosamine transferase os:rattus norvegicus gn:eogt pe:2 sv:1 [Automatic annotation] |
| Nb exon | 9 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1263 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.63e-221 |
| EggNOG OGs | KOG4698@1|root,KOG4698@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00005,RC00059 |
| KEGG ko | ko:K18134 |
| KEGG Reaction | R09304,R09676 |
| KEGG Pathway | ko00514,map00514 |
| EC | 2.4.1.255 |
| Description | EGF domain-specific O-linked N-acetylglucosamine |
| COG category | Z |
| CAZy | GT41 |
| BRITE | ko00000,ko00001,ko01000,ko01003 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0016757 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1020_10a-0001 ID=EsuBft1020_10a-0001|Name=EsuBft1020_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1263bp|location=Sequence derived from alignment at Scaffold_581:196640..207955- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCGAGGATGGAATGCAGACTGGACGACGAAGAGTTTCCAACCCGTGGA
CCAGTTGGAGTGCGATGGCTGGGTTGATCATCCCGTCATGGTGATTCAGC
GGGACACCTTCGCGAATCTGTTTCACGACTCGGAAGATTTCGTCAACGCC
TTCCTGGCGATGTCTATCCTCAGAAAACGCCCGGGGGATGTGCAGGTGCT
GCTGACCGACCTTTATCCGCGAGGACCATTCTGGCCCATGTGGGACAAGG
TGTTCGGAGTGGGACGCTCAACGCTGACGGCATGGGACGTAGGGCTGGAG
TATGGCACAGGGAAGGTGTGCTTTAGGGACCTTACCGTGGGCATCTTTGG
CCCCGCCGCTCCGACGACGATGGCCAGGATGGTGACCCCCTGCTTCCACA
CGGCGCTCGTCAGGGCTTACTCGGACTTCGTCATCAGGCTTGTGTTTTGT
TCCAACAACAATCTCGTCTTTGTTTCCAAAACCGTCCGCGGCAGAGGCCT
AGATCTCCAGGGGATGACGAGCTACGCGTCCCCTCCCTCGAAGAAGGTGG
TGGTCACGTGGATGGCTAGGAGGTCTTCCGTTCAGTGGCCCGAGCGAGCC
TTTTGCAGCGAGGACGGGAGGGATTCGTTCTTCACGTGCGAGTACTTCAG
CCACCTCGACACGCGGGAGCTGCAGCGCAAGGTCAAGAACGAGGCAGATG
TGAGAGACGACAAAGCTTGGCCGAGTCACACCCCTCACTCTGGGGTTGTG
CAAGGACTTAAGGCCCTCGAGGGCGAAGAGTTTTCCAACGGTGCGGTTGT
GGAGGTTCGGGACGCGGACTACAACCTCCTCAGCTTCGAGGAGCAGATTA
AGCACGACCTAGAGACGGACGTAATGGTACCTCTTCTTTGGACTCGTCGG
CTGGGTCACACGTTGTACAACCCGGTTTCACCCAGGGCGAAGATTGAACG
TGGGAAATTGCTGATCTTTCCATGCCCCTCCATCTCCACCTCCCCCGTCT
TTCTCGTTGCCGGGACCCCCATCGATGCGCACAAGATCGGTCCGCACGGG
GCCGGATTGTTCCACATTATCTTCACCCCTGACCGAGCCAGCCTCATCGA
GCTTCAGATAGACCAGACCAAAGCCCGGAAGCACTTCAACAACCTGGCCA
AGTGGTCGGGCCACGGCTACAAAGCGTCGGGCGGGCCCAACCCCGTGAAT
GTGGCGGACACAGTAGGCATGGTGCGGGAGGCCATCGGCGACATGGACCT
CTCAAGGCACTAA back to topprotein sequence of EsuBft1020_10a-0001 >EsuBft1020_10 ID=EsuBft1020_10|Name=EsuBft1020_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=420bp
MRGWNADWTTKSFQPVDQLECDGWVDHPVMVIQRDTFANLFHDSEDFVNA
FLAMSILRKRPGDVQVLLTDLYPRGPFWPMWDKVFGVGRSTLTAWDVGLE
YGTGKVCFRDLTVGIFGPAAPTTMARMVTPCFHTALVRAYSDFVIRLVFC
SNNNLVFVSKTVRGRGLDLQGMTSYASPPSKKVVVTWMARRSSVQWPERA
FCSEDGRDSFFTCEYFSHLDTRELQRKVKNEADVRDDKAWPSHTPHSGVV
QGLKALEGEEFSNGAVVEVRDADYNLLSFEEQIKHDLETDVMVPLLWTRR
LGHTLYNPVSPRAKIERGKLLIFPCPSISTSPVFLVAGTPIDAHKIGPHG
AGLFHIIFTPDRASLIELQIDQTKARKHFNNLAKWSGHGYKASGGPNPVN
VADTVGMVREAIGDMDLSRH back to topmRNA from alignment at Scaffold_581:196640..207955- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1020_10a-0001 ID=EsuBft1020_10a-0001|Name=EsuBft1020_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=11316bp|location=Sequence derived from alignment at Scaffold_581:196640..207955- (Ectocarpus subulatus male Bft15b)
ATGCGAGGTCAATGGGGTCTAACGACGACGGCATGCACGACTATGAGTAC
ACCCCCCCCCCCATCGGCGTTTGCCATCGGGATTGGGTTTTCGTCGCTTG
GCAAAGACGTTGTAAAACAAGCCAATTCACTTCGTGANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTCCGGCAT
GTTCGGTTTTCCGCTTCAGGATGGAATGCAGACTGGACGACGAAGAGTTT
CCAACCCGTGGACCAGTTGGAGTGCGATGGCTGGGTTGATCATCCCGTCA
TGGTAACGCGCCAACATGAAACCTATACCGCAGAGGGGATTTTTGAGCCT
CTTAGTATTCCTCGATGGGTTTCCATGGAAACGGACGTGTGCTAGAAAAT
TGAACCGTTCCGGGTGTTTTTGCGGTGTACGCGTTGCTCCCACGCAGCTT
TGCGCCCATACATACATTGATGGAGCGGAAATCCGCTAAACCTTGTCAGC
CCCCCCCCGTTTCATGGGATTTCTACTCCCGGACACCCATACACCTCTAT
ATATTGCTTGTCTTGGGGGCGACGTGGATTGATTTTTGGGGGGTCGTGCC
TTTCCGGCAGGTGATTCAGCGGGACACCTTCGCGAATCTGTTTCACGACT
CGGAAGATTTCGTCAACGCCTTCCTGGCGATGTCTATCCTCAGAAAACGC
CCGGGGGATGTGCAGGTGCTGCTGACCGACCTTTATCCGCGAGGACCATT
CTGGTGAGAGAAAGAGAGAGAGGGGCTGGAACTCTCTACTATTTTCGGTT
TATATTTTGTTGCTTTTTGGTGTGGGGCTAATTGCGAGAAAGGAGGTTGG
GCGGGGAATCTCTACGTCTAGTGTTTTTTGTGTTTTTTTGAGGGGGGGGG
GCTCTGTTGTATGGGTCCTACCTTCGTCGTTAGTCTCTTCGTTGCAATGG
TGTTGCCGTGTTGTGCAGTGCTCCGACAACAACCTACCAAATGCCCTGCT
GGTTTTTCCAACTGCTTCCGGTGGTGACACCCCGCGGCTCAGAATTTCAT
ACCTGCCGTATGAACGTGTGTACCACCCGGCGTGGGTGTTTTTCGCTGAT
TGCTTCCGCATCTCTCGCTCTGTGGCCGGGCATTCAAACCGATCTCTTTC
CGACCTGGAATGCTGGCTACGCGGAACGCTCGCTGGCTACGCGGAACGCT
CGCTGGCTACGCGGAACGCTTTCTGCACGGAACGCTTGCTACACTGAACC
CTCGGAAACGCGGGACGGCGGCACAATACCCATCCCAAAACGCGCCGGAA
ACTTTCAATACGGGGCATGCCTCCAAACCCAAACATCGGGACATGAAAAT
AACGTATCAATGTTGCGGTGTGCCCTGCTGAAATACCGCGCTGGGTGGCG
TACGTCGGCTCACACCAGGCCCATGTGGGACAAGGTGTTCGGAGTGGGAC
GCTCAACGCTGACGGCATGGGACGTAGGGCTGGAGTATGGCACAGGGAAG
GTATGTAAGCGTGATTGTTTCGTTTTGTCTTGTTCTTATTTTCTTTCTCT
GGCCGTTTCGGGGTACGTGCACAAACACAGTGTTTATGTGTACGTTTGGC
GATGTTGGGGGTTGTCGCCGGCTATGCCGGCAGGCGTTGCGCTTGGAGTG
GAGTTTGCGTGGGGCGTCGTTGCTTCGTTGGCCGCACTCTTTTGTGTTTC
ATCGAGCGCCGGGCTGGAGTACGTCACAAGAAGTGTGGGGTCTCTAGGGG
TCATGGCTTGCCATCGATAACGGAGGTTTGACTGTCTTGTGTCTTTAGAG
AAGACGTCAGACCTTGGATTGGTTGCATCTTACAAGGGGTTTTGTTTTTT
CATTTTTGCCCTCCAGCAGATTGAGGGTCGTTTCCTGTTACGCCCTCCAG
GCGTTTACTCGTTGCTTTGGCACCCGATTTCTGACTCCGCTCCACGTGCT
GGCGACTGGTGGTACGGGACGTGGGGTTCCCATATTACGGCGCAACGTCT
TGGGGTGTGTTTTGTGTGCTACGTAGGCGCGTAGTGTCATCTTGACAGCA
GGGAATGAACCATCGAGCGCTCATTTTATGAAGCCGAAATATTTTCCCAC
CGTCATTGCTACCTGTCACCTCTCGAGAGCACATTTTCTGTGCTTGACTA
TCGGCACTGGCCTTTGCGTACCACTCCGTTCTACTTCAAACGTGCAACTT
TGCCGTCCACTGCTGTCGGCGACGCTTATCATCACCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNAGTTCAAATGTGATTGCGGCTTCGAATGCGAAGAC
CGTGTTCATGTAGTCGCGGAATGTCCGTTGTACAAGAAGGAGAGGGAAGT
GTACGTGACTGAGCTGGGAAAAATAGATGGAACGTACAGGGAGATGTTTG
AGGCATGGAATAGAGAGGAAAGGACGGTAGCTGTAGTGGGGCATAGGAGG
TGGGTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGACAGACTAGGGAC
GACATTTTTGAGCCACCTTTGGCAAAGTAGAAAGGAACGATTGGCCATCG
GTGATCGGTCCTGTGGGAACAACGCTCCGTCCTCTCGAGGACGCGTGGTC
AATGGTCTAACCGCTAAGACATGCAAAACATAAGAGTACGCCCCCCCACC
CGCTGCCGCCGACTTGATTTTATCGAATCCCCTAAGGTGTGCTTTAGGGA
CCTTACCGTGGGCATCTTTGGCCCCGCCGCTCCGACGACGATGGCCAGGA
TGGTGACCCCCTGCTTCCACACGGCGCTCGTCAGGGCTTACTCGGACTTC
GTCATCAGGCTTGTGTTTTGTTGTTATTGATGTTGCCAATGGTGTGGTTG
TTTTTGCTGTTATGTTGTGTTTTAGGCAGAACGCTTTTCTGTTTTTGTCA
GGCCCTGCTTTGACGTCCTTCACGGCGCGAGTTATCCTCAGATCTCTCGC
GCCGGAGTGCCTTCCGTTGTGTTTTTTTCAAGTACGTCGAGGCAGACAAA
TTATTGCGCAGGCGCTGGATTCTTGAGGGGAGCGGCGTGGCCAAAGGCCG
TCCAACTAGGCATTTGCCTGGCCTGTCCTTTTCCGTCATTGGCAGCTCAA
TATTTGACAAAAGTAGCATAGGAGTCCGCCGGCATTCATATCAAATGCGG
GAGCTCTTCAATATGGAAGAATTGCCACGCCTGTCGCTAAGGGAGGAAGA
ATCCGAGGAATGCGTGGGGATGCCGGTAAGAAATAGAGCACACACTTGTT
CCCCCAAGAAACGTTGCCCGGCAGTAGTGCATCGCTTTCCCCAGACGTGA
GTCAAGGATACAGGTAGGACATGAACGAAGCACAAGTTCAAGCTCTCGAG
GGTAGTCACTCGTTTATCTTTGGCCGGGTGGTGACAGTAATGTTTTTCAT
TTGTGTGCGTGTGTGTGTGCTGGACCCTCCGAGTCTGGGGAATCTAGCGT
CTGCTGATTCGGAATAATCGGGTGGTCCACGTGCACAGCCAACAACAATC
TCGTCTTTGTTTCCAAAACCGTCCGCGGCAGAGGCCTAGATCTCCAGGGG
ATGACGAGCTACGCGTCCCCTCCCTCGAAGAAGGTGGTGGTCACGTGGAT
GGCTAGGAGGTCTTCCGTTCAGGTGTGTTGAGGCAATCGTGCCATCTGAC
AGGATTTGACGTGATCATGGTACCGGCTGTAATTGCTCCTATGCACCTCG
CTATGTTCTTGTCTCTGGATGGAGGTGGTAAATAGTGGCCATTTTAAAGC
GACCAATCTCTTCCCTGTTGTGTGGAACACGCTCTGGGAATTTTGGGGCT
GCTGTTGTCGCATGTTTGAACCCGACGACTCTCCTCCTCGCTGTGTTTGT
TTGCTGTTACAGTGGCCCGAGCGAGCCTTTTGCAGCGAGGACGGGAGGGA
TTCGTTCTTCACGTGCGAGTACTTCAGCCACCTCGACACGCGGGAGCTGC
AGCGCAAGGTCAAGAACGAGGCAGATGTGAGAGACGACAAAGCTTGGCCG
AGTCACACCCCTCACTCTGGGGTAATATGGCGGCAGCATACTTGGAATTA
ATCTCGTGCAGCGAGGCGCGGCGTGCTGATATTGCAGGGGTATGTAGTGC
ATCGTGTACGCTGTATCCGACTCACAACGCCGCGTTGAGTGAGCCGGAGG
ACTCGTACCGTCGGCGTTCGTGTAGCGTGCCGTCCGGTGTCCACAACGGA
ACGTGCACCCCTTTTTGCCAGCCATAGAGGCTCCTCTTCGTGCGCGTTAA
CTTTGAGAGCCCGTGGGTGCTACGTGGGGGCTGTTTCGACTGAGCTCAAC
TACGCCGCGGGTGTGTCGTGGGCTGTCGTTTCGTCTATCCGGGAAATGCA
CGACTGCATAATGTTGCCACTTAACAACTATGGCCGCGTAATGACCGGCC
AACATTGCCCCTACAAAAATCACGTTTTACCGAGAAATATTTGTTTCGCG
AATTGTATATTCGATGATGGTAGCTGGTAACGAAGTATGTTTTCCCGCAA
AGCCCGAGTGTACGTAGACGGAGACCCCTTACACCCCTACAAACCTTTCC
TTCAGAAACGCCGACATTGACTGCCTTTTTTGTGCACCTACCATGCAAAC
CTATTGGAAATCAATGAAGAACAACACGGCGTTTTTGTACCACATAATGC
CCAGCCGACCAGAATCGGCCGAGCATCCATGTCTAGCAGGAGCACTATAG
CCAGTAAGCGACGAGGCTACCTGACTTACGATGACCCTTAACTACATGTT
CGGAAAATAGTTCGTTTGGGGAATGCTTCCCCCCCTCCCATCGGTGACCT
CAACGCGTGTGGGCCCGGCTCGAGTACGAGGTCGTTCCAAAGAGTACGAC
CCATCCTTGCCATGGCGCCCCTGCCGCCCGTCTCACGCTGTGACGCACAC
ACAAAGGTTGTGCAAGGACTTAAGGCCCTCGAGGGCGAAGAGTTTTCCAA
CGGTGCGGTTGTGGAGGTTCGGGACGCGGACTACAACCTCCTCAGCTTCG
AGGAGCAGATTAAGCACGACCTAGAGACGGACGTAATGGTAAGCTGGTGC
GGTTGGGTTTCGTTCTTCGCTTGCTCGCTGGTGGTCGAGGACAGCTGTAC
GGTAGGGTTTTTGTTTGTTCTGTTTGCTTGTGGTCGAACATCCTTCTGTG
TATTCTCGCTAGCAAACGAAATGCCCTCTGCTTGCCATTCATTCTGTAAG
TCGATTCGTACACCTTCTTCGAGGAATAGGTACCTCTTCTTTGGACTCGT
CGGCTGGGTCACACGTTGTACAACCCGGTTTCACCCAGGGCGAAGATTGA
ACGTGGGAAATTGCTGATCTTTCCATGCCCCTCCATCTCCACCTCCCCCG
TCTTTCTCGTTGCCGGGACCCCCATCGATGCGCACAAGATCGGTCCGCAC
GGGGCCGGATTGTTCCACATTATCTTCACCCCTGACCGAGCCAGCCTCAT
CGAGCTTCAGATAGACCAGACCAAAGCCCGGAAGCACTTCAACAACCTGG
CCAAGTGGTCGGGCCACGGCTACAAAGCGTCGGGCGGGCCCAACCCCGTG
AATGTGGCGGACACAGTAGGCATGGTGCGGGAGGCCATCGGCGACATGGA
CCTCTCAAGGCACTAA back to topCoding sequence (CDS) from alignment at Scaffold_581:196640..207955- >EsuBft1020_10a-0001 ID=EsuBft1020_10a-0001|Name=EsuBft1020_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1263bp|location=Sequence derived from alignment at Scaffold_581:196640..207955- (Ectocarpus subulatus male Bft15b)
ATGCGAGGATGGAATGCAGACTGGACGACGAAGAGTTTCCAACCCGTGGA
CCAGTTGGAGTGCGATGGCTGGGTTGATCATCCCGTCATGGTGATTCAGC
GGGACACCTTCGCGAATCTGTTTCACGACTCGGAAGATTTCGTCAACGCC
TTCCTGGCGATGTCTATCCTCAGAAAACGCCCGGGGGATGTGCAGGTGCT
GCTGACCGACCTTTATCCGCGAGGACCATTCTGGCCCATGTGGGACAAGG
TGTTCGGAGTGGGACGCTCAACGCTGACGGCATGGGACGTAGGGCTGGAG
TATGGCACAGGGAAGGTGTGCTTTAGGGACCTTACCGTGGGCATCTTTGG
CCCCGCCGCTCCGACGACGATGGCCAGGATGGTGACCCCCTGCTTCCACA
CGGCGCTCGTCAGGGCTTACTCGGACTTCGTCATCAGGCTTGTGTTTTGT
TCCAACAACAATCTCGTCTTTGTTTCCAAAACCGTCCGCGGCAGAGGCCT
AGATCTCCAGGGGATGACGAGCTACGCGTCCCCTCCCTCGAAGAAGGTGG
TGGTCACGTGGATGGCTAGGAGGTCTTCCGTTCAGTGGCCCGAGCGAGCC
TTTTGCAGCGAGGACGGGAGGGATTCGTTCTTCACGTGCGAGTACTTCAG
CCACCTCGACACGCGGGAGCTGCAGCGCAAGGTCAAGAACGAGGCAGATG
TGAGAGACGACAAAGCTTGGCCGAGTCACACCCCTCACTCTGGGGTTGTG
CAAGGACTTAAGGCCCTCGAGGGCGAAGAGTTTTCCAACGGTGCGGTTGT
GGAGGTTCGGGACGCGGACTACAACCTCCTCAGCTTCGAGGAGCAGATTA
AGCACGACCTAGAGACGGACGTAATGGTACCTCTTCTTTGGACTCGTCGG
CTGGGTCACACGTTGTACAACCCGGTTTCACCCAGGGCGAAGATTGAACG
TGGGAAATTGCTGATCTTTCCATGCCCCTCCATCTCCACCTCCCCCGTCT
TTCTCGTTGCCGGGACCCCCATCGATGCGCACAAGATCGGTCCGCACGGG
GCCGGATTGTTCCACATTATCTTCACCCCTGACCGAGCCAGCCTCATCGA
GCTTCAGATAGACCAGACCAAAGCCCGGAAGCACTTCAACAACCTGGCCA
AGTGGTCGGGCCACGGCTACAAAGCGTCGGGCGGGCCCAACCCCGTGAAT
GTGGCGGACACAGTAGGCATGGTGCGGGAGGCCATCGGCGACATGGACCT
CTCAAGGCACTAA back to top
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