Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1020_9 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 98 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-05_000130.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1020_9a-0001 ID=EsuBft1020_9a-0001|Name=EsuBft1020_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=985bp|location=Sequence derived from alignment at Scaffold_581:192807..193791- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTGAAAAATCCAACCGCCGCACGAGGGCTGGGAGAGGACGCGATGGG
GGTGGGAGCGCGCAGAACACTGATACGGGAGGCGGAGAGCTGGGTCCTAC
AGCTACACGTAGGGGCGGAGGACGCCGAGGCAACGGTGGAGTCAATCGCA
GTGGCGGGGGCCCGGTGAGCCCATAGGGGCACGGCTTGTGCAGCACGGCG
GGGCCAACGTTTTTTTAGCTTGCGACGTGGGGAATGTTGTTGGACAATGG
AAGTTCAATGACAGCCTGGGAAACGGGGAAGAGTTGCGTGGTTGTGTGTA
AGCCTCAGCAGCTTTTGTTTGTTTTGTGTTTGCTCACAAGGGAGATCAGG
ACCAGGTCCGAGAAGTGAGGAGGCTAGTGACGCTCAATCGGGGTACAGAG
CACACGGCGGAGCCATCGCTCTTGATTAGTGGAGATGTATAGTGATGCGT
ACGTACCACTGTCCACGTTCCGTCGCGGTCCTGAAGTCAGAGCACTGACG
CATGGTCAGGCTCTGCGAGCATATTGAGAGATTGCCAAGGGCTCGGGGTG
GTGAACAAAGGACATTGCCTTGCGCTCGCGTCGGGGTGCAAGGGCATCTG
CCCTCGTGATAAGGGGGTTTCGGCCAGAGGACAGGGAGGTGGAAGTCAGA
TGCGTACGAGCCATACTCAGTTCAACAAAAGGGGGAGGGTTCCTCTGCGT
TGAGTTTGAGGGGATCAGAAGAAAGTAGCGTTCAGACAGCAAGGGGAAAA
CACGGCATGGGGTAGTGGGACGAAGGTGCTCTGTTCTACTGTATGGAGAC
CCTCATGAACACCTCGGATCGGGTAAAGGTGAATAGTAGATACCATTTGG
GGACTTGGTCGTCTGAGGTGTTTCGTACAGTAGGAAGACCCCGGGTGTTA
TTCTTCGGGGAGAGAATAGAGACAGCATTATGGTAGTACTGATGGAGAGA
GACACGGTAGAAGAGGCGCAGAGAGCGTCTGAGGG back to topprotein sequence of EsuBft1020_9a-0001 >EsuBft1020_9 ID=EsuBft1020_9|Name=EsuBft1020_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=55bp
MLKNPTAARGLGEDAMGVGARRTLIREAESWVLQLHVGAEDAEATVESIA
VAGAR back to topmRNA from alignment at Scaffold_581:192807..193791- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1020_9a-0001 ID=EsuBft1020_9a-0001|Name=EsuBft1020_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=985bp|location=Sequence derived from alignment at Scaffold_581:192807..193791- (Ectocarpus subulatus male Bft15b)
ATGTTGAAAAATCCAACCGCCGCACGAGGGCTGGGAGAGGACGCGATGGG
GGTGGGAGCGCGCAGAACACTGATACGGGAGGCGGAGAGCTGGGTCCTAC
AGCTACACGTAGGGGCGGAGGACGCCGAGGCAACGGTGGAGTCAATCGCA
GTGGCGGGGGCCCGGTGAGCCCATAGGGGCACGGCTTGTGCAGCACGGCG
GGGCCAACGTTTTTTTAGCTTGCGACGTGGGGAATGTTGTTGGACAATGG
AAGTTCAATGACAGCCTGGGAAACGGGGAAGAGTTGCGTGGTTGTGTGTA
AGCCTCAGCAGCTTTTGTTTGTTTTGTGTTTGCTCACAAGGGAGATCAGG
ACCAGGTCCGAGAAGTGAGGAGGCTAGTGACGCTCAATCGGGGTACAGAG
CACACGGCGGAGCCATCGCTCTTGATTAGTGGAGATGTATAGTGATGCGT
ACGTACCACTGTCCACGTTCCGTCGCGGTCCTGAAGTCAGAGCACTGACG
CATGGTCAGGCTCTGCGAGCATATTGAGAGATTGCCAAGGGCTCGGGGTG
GTGAACAAAGGACATTGCCTTGCGCTCGCGTCGGGGTGCAAGGGCATCTG
CCCTCGTGATAAGGGGGTTTCGGCCAGAGGACAGGGAGGTGGAAGTCAGA
TGCGTACGAGCCATACTCAGTTCAACAAAAGGGGGAGGGTTCCTCTGCGT
TGAGTTTGAGGGGATCAGAAGAAAGTAGCGTTCAGACAGCAAGGGGAAAA
CACGGCATGGGGTAGTGGGACGAAGGTGCTCTGTTCTACTGTATGGAGAC
CCTCATGAACACCTCGGATCGGGTAAAGGTGAATAGTAGATACCATTTGG
GGACTTGGTCGTCTGAGGTGTTTCGTACAGTAGGAAGACCCCGGGTGTTA
TTCTTCGGGGAGAGAATAGAGACAGCATTATGGTAGTACTGATGGAGAGA
GACACGGTAGAAGAGGCGCAGAGAGCGTCTGAGGG back to topCoding sequence (CDS) from alignment at Scaffold_581:192807..193791- >EsuBft1020_9a-0001 ID=EsuBft1020_9a-0001|Name=EsuBft1020_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=168bp|location=Sequence derived from alignment at Scaffold_581:192807..193791- (Ectocarpus subulatus male Bft15b)
ATGTTGAAAAATCCAACCGCCGCACGAGGGCTGGGAGAGGACGCGATGGG
GGTGGGAGCGCGCAGAACACTGATACGGGAGGCGGAGAGCTGGGTCCTAC
AGCTACACGTAGGGGCGGAGGACGCCGAGGCAACGGTGGAGTCAATCGCA
GTGGCGGGGGCCCGGTGA back to top
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