EsuBft1020_8a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Cross References

External references for this mRNA


Database	Accession
GO	0016779
GO	0006278
GO	0004519
GO	0032197
GO	0090305

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_581:186066..187740-
coding sequence from alignment at Scaffold_581:186066..187740-

spliced messenger RNA

>EsuBft1020_8a-0001 ID=EsuBft1020_8a-0001|Name=EsuBft1020_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1675bp|location=Sequence derived from alignment at Scaffold_581:186066..187740- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGTTCGTTGTGCGCCGACTCCAGGAGCTGGGGCGGAGGAGGAGAAT
CCCGTTCTACATGTGCTTCATCGATCTACAGAAGGCCTACGACTCGGTGG
ACCGGGAGCTGCTGTGGAAGGTGCTGGCCCGGGCCGGGATCGCCGCGGAG
ATCATCGCCGTCATCCGCAAGTTCCACGTCGGAATGCGGGCCCGGGTCCG
CATGGACGATGGGGAGCTATCGGACTGGTTCCCGGTCACGCAGGGACTGC
GACAAGGGTGCTCAATGTCCCCACTGCTGTTCAACGCCTTCTTCGCCGCG
CCTCTCGAGGTCATTGTCACACGGTTCAGCAAGGATGAGGTTATCATGCG
GGACCTAGTATGCCTGAAGGAGGAGGAAGGGGGGGGGAGGACATTGCTGG
ACCGAGTTCGGAGGGCGGTGTGGGGGATGCTATATGCCNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACATAGGC
TAGATACGGCACCAATCAACGGGGCGGGAGGGGGGCGGGAGGAAACGGCG
CGGGAAGAAAGCAAAAGCGAGAAGAGACCGACCGCGTGACGTGACATGTT
GCGGTTGAACTTCAGCGACTAGTTTTTCTGTTGCCCGCTCCCCCGTTTGC
TGTCGCGTTCAGACTGTCTACGGATATCCCTGACTCTGTGCGAGTCTGTT
TATGTCCTCGTCTGTCTTTGGTTTATTTCGTTTTATTTTGTTTTGTATTT
TTACTGGCACGGACTACTGACCCTTGGGGTCCTTCCGGAAGGCTACCCCC
CAGGCTGGTGGTGCGCACGTTCCACTATTTAGTTATTTATTTGTTTCTGA
TTCTTTTGTTTTCTTGTATTTTATC

protein sequence of EsuBft1020_8a-0001

>EsuBft1020_8 ID=EsuBft1020_8|Name=EsuBft1020_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=147bp
MLFVVRRLQELGRRRRIPFYMCFIDLQKAYDSVDRELLWKVLARAGIAAE
IIAVIRKFHVGMRARVRMDDGELSDWFPVTQGLRQGCSMSPLLFNAFFAA
PLEVIVTRFSKDEVIMRDLVCLKEEEGGGRTLLDRVRRAVWGMLYAX

mRNA from alignment at Scaffold_581:186066..187740-

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft1020_8a-0001 ID=EsuBft1020_8a-0001|Name=EsuBft1020_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1675bp|location=Sequence derived from alignment at Scaffold_581:186066..187740- (Ectocarpus subulatus male Bft15b)
ATGCTGTTCGTTGTGCGCCGACTCCAGGAGCTGGGGCGGAGGAGGAGAAT
CCCGTTCTACATGTGCTTCATCGATCTACAGAAGGCCTACGACTCGGTGG
ACCGGGAGCTGCTGTGGAAGGTGCTGGCCCGGGCCGGGATCGCCGCGGAG
ATCATCGCCGTCATCCGCAAGTTCCACGTCGGAATGCGGGCCCGGGTCCG
CATGGACGATGGGGAGCTATCGGACTGGTTCCCGGTCACGCAGGGACTGC
GACAAGGGTGCTCAATGTCCCCACTGCTGTTCAACGCCTTCTTCGCCGCG
CCTCTCGAGGTCATTGTCACACGGTTCAGCAAGGATGAGGTTATCATGCG
GGACCTAGTATGCCTGAAGGAGGAGGAAGGGGGGGGGAGGACATTGCTGG
ACCGAGTTCGGAGGGCGGTGTGGGGGATGCTATATGCCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACATAGGC
TAGATACGGCACCAATCAACGGGGCGGGAGGGGGGCGGGAGGAAACGGCG
CGGGAAGAAAGCAAAAGCGAGAAGAGACCGACCGCGTGACGTGACATGTT
GCGGTTGAACTTCAGCGACTAGTTTTTCTGTTGCCCGCTCCCCCGTTTGC
TGTCGCGTTCAGACTGTCTACGGATATCCCTGACTCTGTGCGAGTCTGTT
TATGTCCTCGTCTGTCTTTGGTTTATTTCGTTTTATTTTGTTTTGTATTT
TTACTGGCACGGACTACTGACCCTTGGGGTCCTTCCGGAAGGCTACCCCC
CAGGCTGGTGGTGCGCACGTTCCACTATTTAGTTATTTATTTGTTTCTGA
TTCTTTTGTTTTCTTGTATTTTATC

Coding sequence (CDS) from alignment at Scaffold_581:186066..187740-

>EsuBft1020_8a-0001 ID=EsuBft1020_8a-0001|Name=EsuBft1020_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=441bp|location=Sequence derived from alignment at Scaffold_581:186066..187740- (Ectocarpus subulatus male Bft15b)
ATGCTGTTCGTTGTGCGCCGACTCCAGGAGCTGGGGCGGAGGAGGAGAAT
CCCGTTCTACATGTGCTTCATCGATCTACAGAAGGCCTACGACTCGGTGG
ACCGGGAGCTGCTGTGGAAGGTGCTGGCCCGGGCCGGGATCGCCGCGGAG
ATCATCGCCGTCATCCGCAAGTTCCACGTCGGAATGCGGGCCCGGGTCCG
CATGGACGATGGGGAGCTATCGGACTGGTTCCCGGTCACGCAGGGACTGC
GACAAGGGTGCTCAATGTCCCCACTGCTGTTCAACGCCTTCTTCGCCGCG
CCTCTCGAGGTCATTGTCACACGGTTCAGCAAGGATGAGGTTATCATGCG
GGACCTAGTATGCCTGAAGGAGGAGGAAGGGGGGGGGAGGACATTGCTGG
ACCGAGTTCGGAGGGCGGTGTGGGGGATGCTATATGCCNNN