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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LSK8 |
| ProteomeId | EsuBft1032_8 |
| Protein domains | PTHR24198 |
| Protein domains | IPR002110 |
| Protein domains | IPR020683 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | ankyrin repeat and socs box protein 2 os:homo sapiens gn:asb2 pe:1 sv:1 [Automatic annotation] |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 966 |
| Hectar predicted targeting category | other localisation |
| Evalue | 6.91e-57 |
| EggNOG OGs | COG0666@1|root,KOG4177@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG ko | ko:K10380 |
| KEGG Pathway | ko04624,ko05205,map04624,map05205 |
| Description | spectrin binding |
| COG category | I |
| BRITE | ko00000,ko00001,ko04812 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0086065 |
| GO | 0031227 |
| GO | 0032414 |
| GO | 0072659 |
| GO | 0061061 |
| GO | 0051924 |
| GO | 0043231 |
| GO | 0030154 |
| GO | 0098589 |
| GO | 0055117 |
| GO | 0016020 |
| GO | 0048513 |
| GO | 0043232 |
| GO | 0007165 |
| GO | 1902582 |
| GO | 0044304 |
| GO | 0086001 |
| GO | 0016567 |
| GO | 0044459 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1032_8a-0001 ID=EsuBft1032_8a-0001|Name=EsuBft1032_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=966bp|location=Sequence derived from alignment at Scaffold_578:145706..146671- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCTACTTCCTTGGACAAGCAGCTACTGGTTGAAGTGCTGAAAGGAAA
CGAGAGAGGCGTCGAAGAACAACTCGACCTGGGGGCAAGCCTAGACGGCT
TCGACATATGGAAGCCGCTGTTCGCTGCGGCAAGACACGGGCGCGCCGGC
GTCGTAACCCTACTCGCTAAGAGGGGTGCCGAACTGGAAGCCACTTGTCC
GCGCGACGTGCGGGATGACCGAGGGATGTACGTGTACTCGAGCGGGTCGC
CCGCGGTTCATGCTGCTGTGTACGCCAGAAGGGTCGATTCTCTCCGCGCC
CTGCTCGATGCCGGAGCGGACCCGAACGCCGCGGACGCCACCGGCCACAC
GCCGCTCATGCAGGCGTGCAGGTTGTTCGGTGCTGCTGACCGCTACGTGG
TCGTTCGCGAGCTGCTGCGGGGAGGTGCCGATCCCGCGCGCCAGAGCGAC
AATGGCATGATCGCGTTGCACTACGCGTCGTTCAGAGACGACACGGACGT
CATTGGGTTGCTCCTGCCGAAGGCGATGGCAACGCTCAACCAAGACACCG
GGTACGGGGGAACGCCGCTGTGTTGCGCCGCGTCCGGCGGGTACAAGGAA
TCCGTGCGGTGTCTGCTCTCTTTCGGGGCGAGCGACAACGCGCTTTGGTC
GAAGAAGGGCGCAAGTGCGCTAGTCGGGGCCGTCCAGGAAGGCAGGCAGG
AGATAGTCCGCATCCTTCTCGACCATGGAATGGACGCGGTCGGGGGGCTG
GGCGCGGTGCCGAAAGCCATTTGGACCGCAACCCGGAAAGGCCACGCGAA
GATCCTACACATGCTGCTGGCCGTGGCGGGAGAGGAAACGCGGCGACAGT
GGGCGACGATGCCCTACAACGAATCCACCTTGCTCCACTGCGCCACCTCA
GTCGGCTCACTTTCCGTGATGAGCGCGATTCTCTCGGCCGGCGCGGATGA
GAGAGCGAGGGATTAG back to topprotein sequence of EsuBft1032_8a-0001 >EsuBft1032_8 ID=EsuBft1032_8|Name=EsuBft1032_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=321bp
MSTSLDKQLLVEVLKGNERGVEEQLDLGASLDGFDIWKPLFAAARHGRAG
VVTLLAKRGAELEATCPRDVRDDRGMYVYSSGSPAVHAAVYARRVDSLRA
LLDAGADPNAADATGHTPLMQACRLFGAADRYVVVRELLRGGADPARQSD
NGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKE
SVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLDHGMDAVGGL
GAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYNESTLLHCATS
VGSLSVMSAILSAGADERARD back to topmRNA from alignment at Scaffold_578:145706..146671- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1032_8a-0001 ID=EsuBft1032_8a-0001|Name=EsuBft1032_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=966bp|location=Sequence derived from alignment at Scaffold_578:145706..146671- (Ectocarpus subulatus male Bft15b)
ATGTCTACTTCCTTGGACAAGCAGCTACTGGTTGAAGTGCTGAAAGGAAA
CGAGAGAGGCGTCGAAGAACAACTCGACCTGGGGGCAAGCCTAGACGGCT
TCGACATATGGAAGCCGCTGTTCGCTGCGGCAAGACACGGGCGCGCCGGC
GTCGTAACCCTACTCGCTAAGAGGGGTGCCGAACTGGAAGCCACTTGTCC
GCGCGACGTGCGGGATGACCGAGGGATGTACGTGTACTCGAGCGGGTCGC
CCGCGGTTCATGCTGCTGTGTACGCCAGAAGGGTCGATTCTCTCCGCGCC
CTGCTCGATGCCGGAGCGGACCCGAACGCCGCGGACGCCACCGGCCACAC
GCCGCTCATGCAGGCGTGCAGGTTGTTCGGTGCTGCTGACCGCTACGTGG
TCGTTCGCGAGCTGCTGCGGGGAGGTGCCGATCCCGCGCGCCAGAGCGAC
AATGGCATGATCGCGTTGCACTACGCGTCGTTCAGAGACGACACGGACGT
CATTGGGTTGCTCCTGCCGAAGGCGATGGCAACGCTCAACCAAGACACCG
GGTACGGGGGAACGCCGCTGTGTTGCGCCGCGTCCGGCGGGTACAAGGAA
TCCGTGCGGTGTCTGCTCTCTTTCGGGGCGAGCGACAACGCGCTTTGGTC
GAAGAAGGGCGCAAGTGCGCTAGTCGGGGCCGTCCAGGAAGGCAGGCAGG
AGATAGTCCGCATCCTTCTCGACCATGGAATGGACGCGGTCGGGGGGCTG
GGCGCGGTGCCGAAAGCCATTTGGACCGCAACCCGGAAAGGCCACGCGAA
GATCCTACACATGCTGCTGGCCGTGGCGGGAGAGGAAACGCGGCGACAGT
GGGCGACGATGCCCTACAACGAATCCACCTTGCTCCACTGCGCCACCTCA
GTCGGCTCACTTTCCGTGATGAGCGCGATTCTCTCGGCCGGCGCGGATGA
GAGAGCGAGGGATTAG back to topCoding sequence (CDS) from alignment at Scaffold_578:145706..146671- >EsuBft1032_8a-0001 ID=EsuBft1032_8a-0001|Name=EsuBft1032_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=966bp|location=Sequence derived from alignment at Scaffold_578:145706..146671- (Ectocarpus subulatus male Bft15b)
ATGTCTACTTCCTTGGACAAGCAGCTACTGGTTGAAGTGCTGAAAGGAAA
CGAGAGAGGCGTCGAAGAACAACTCGACCTGGGGGCAAGCCTAGACGGCT
TCGACATATGGAAGCCGCTGTTCGCTGCGGCAAGACACGGGCGCGCCGGC
GTCGTAACCCTACTCGCTAAGAGGGGTGCCGAACTGGAAGCCACTTGTCC
GCGCGACGTGCGGGATGACCGAGGGATGTACGTGTACTCGAGCGGGTCGC
CCGCGGTTCATGCTGCTGTGTACGCCAGAAGGGTCGATTCTCTCCGCGCC
CTGCTCGATGCCGGAGCGGACCCGAACGCCGCGGACGCCACCGGCCACAC
GCCGCTCATGCAGGCGTGCAGGTTGTTCGGTGCTGCTGACCGCTACGTGG
TCGTTCGCGAGCTGCTGCGGGGAGGTGCCGATCCCGCGCGCCAGAGCGAC
AATGGCATGATCGCGTTGCACTACGCGTCGTTCAGAGACGACACGGACGT
CATTGGGTTGCTCCTGCCGAAGGCGATGGCAACGCTCAACCAAGACACCG
GGTACGGGGGAACGCCGCTGTGTTGCGCCGCGTCCGGCGGGTACAAGGAA
TCCGTGCGGTGTCTGCTCTCTTTCGGGGCGAGCGACAACGCGCTTTGGTC
GAAGAAGGGCGCAAGTGCGCTAGTCGGGGCCGTCCAGGAAGGCAGGCAGG
AGATAGTCCGCATCCTTCTCGACCATGGAATGGACGCGGTCGGGGGGCTG
GGCGCGGTGCCGAAAGCCATTTGGACCGCAACCCGGAAAGGCCACGCGAA
GATCCTACACATGCTGCTGGCCGTGGCGGGAGAGGAAACGCGGCGACAGT
GGGCGACGATGCCCTACAACGAATCCACCTTGCTCCACTGCGCCACCTCA
GTCGGCTCACTTTCCGTGATGAGCGCGATTCTCTCGGCCGGCGCGGATGA
GAGAGCGAGGGATTAG back to top
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