|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 7029.ACYPI40717-PA |
ProteomeId | EsuBft1005_10 |
Protein domains | Coil |
Protein domains | PTHR19446 |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 2 |
Max annot lvl | 33208|Metazoa |
Length | 326 |
Evalue | 1.12e-18 |
EggNOG OGs | KOG1075@1|root,KOG1075@2759|Eukaryota,39TZY@33154|Opisthokonta,3BI15@33208|Metazoa,3CYKV@33213|Bilateria,420TT@6656|Arthropoda,3SQX5@50557|Insecta,3EDFZ@33342|Paraneoptera |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Description | Reverse transcriptase (RNA-dependent DNA polymerase) |
COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1005_10a-0001 ID=EsuBft1005_10a-0001|Name=EsuBft1005_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3260bp|location=Sequence derived from alignment at Scaffold_576:189229..192982- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTAGTAGCCACCGTCAACCTCGGTGGCAGGCTTGCCCACAACCGTGC AGTCCGGACTGAACCGAAACAGAAGCAATTCAACCGACGGGAATTGCAGT TCGAAGCAGCACGGTGTGCGGTGACTAATCGGTTCCTCCTCAACCTCGAC ACACGACCGGACGAGCGAACAACCACCGCCGCGGAATTGGCGACCGACTT CACCAATGCTCTCCTCGACGCAGCGCGGACGACCCTGGGGGAGGAACCGC GGAGACGCCGCACGCAGGAGTGGTGTGAGACCCCAGAGACGCGAGCAGCG CTGGAGCAGGCCCTTACCAAACGTCGGGAAGCGCGCCGGGCGATGAGGGG CAACTGGAACTCAGCGACGTGCAGGGTTCTCAAAGCAGCGTGTAAGGGAG TGGCTACAGCAGTCGGAACGGGCATTTATGCCCACCTGGACGGATATATA ACTGAGCTCGAAGAAATCTACAAAGATCGCGACATGCGAGGACTGTACCA ACACCTCAAGAGATCAGTGGGCCTCAGCCGGAGACAAGCGGGGGGACAGC AGTTCGTCGCGGATGAGAACGGTGTGTTGCTCCGGAACAGGGACGACATC CTCCAGCGGTGGGCGAGATTCTTCAGAACCCTACTCAACACCAAATCCCC AACCCTGAACCCANACAAAGATCGCGACATGCGAGGACTGTACCAACACC TCAAGAGATCAGTGGGCCTCAGCCGGAGACAAGCGGGGGGACAGCAGTTC GTCGCGGATGAGAACGGTGTGTTGCTCCGGAACAGGGACGACATCCTCCA GCGGTGGGCGAGATTCTTCAGCACCCTATTCAACACCAAATCCCCCACCC TGAACCCAGACATCATCGAACGGGTGACGCAGCGGCCAGCGACACGTGAC ACTCAACGGTTGGGAGATGTGCCAGAACTCGAGGAGGTGGCACGGGCAAC GAAAGGCCTCAAGAACTGGAAGGCACTCGGCCATGACTCCCTCCCTGCCG AGCTGCTCAAGATCGATGACGACGAACCCTTCGTCCTGGGACACCTCCAC ACCATCCTCGTCAAGGTTTGGAACGGAGGAGATATTCCGCGAGAGTGGAA GGATGCAACCATCAAGGTGCTGTACAAGAAGGGCGACCGATCCAACTGTA ATAACTACAGGGGAATTTCGCTACTCTCATGTAGGCGAGGTCCCCATCAA GATCATCACCAACCGTCTAAGCGCCTTCTGCGAAGCCAACAACATCCTCC CGGAGGAACAGCGCGGATTTCGACCCAAGCGATCAACCGTCGACATGCTG GCCGGGATTCCCGCGAAGCTGATCGAAGTCATCCGCCAATTCCACGATGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNGGAGACACCCCTTGACCGAGTACGGAGGGCAGTATGGGGGATGC TGTATGCCGATGATGCCGGCGTCGTATCGAGGTCTGCAGAAGGACTGGCC AGAATGATGACCATCATCGTTGAGGTGTTCGGGGAGTTCGGGCTAACGGT GTCGGAGAAGACGACGGAGACGCTCCTGATGCGCGCATAGGACAAGCCGA CTACAACATCACAGCCCGGCCCGCTTCCTACACTGACCATCGAAGCCGCG GGACAGAAATACGCCCAGACGACCGAGTTCCGGTACCTCGGTGGCCTCGT CAACGAACATGGCGACCTCACCCGGGAGATCAACTACAAGAGCAGAGGAG CGTGGGCGTGCCTCAGGCGATATGGCCGGGAGCTCTTCGACAGACCGCAA GCGCCATTCCGACTCAAGATCCGCCTGCTCCAGGCGGAGGCGATGGAGGC ACGGTTGCATGACATGGTCACCACTCAGCGGCCACTATCAGACGCTGCGG TCGATACATCACCGACTGCTCCTTCGAGCTAACGGGTACAAGCGCAAGAA AGACACCTACCGGCAGCTCTCTTACGCCCAGACGCTGAAGAGGGTCGAAT GTCAGAGCGTTGAAGCCACGATCCGACAACGACGCCTACTGTTCGCGGGA GCATTGGCAAGGCAGCCGGACGGTCGACTCCCGAAGCGAATGATGTTCGG CGAACTGGCAGGGGGGGAGAAGCGACGTAGGGGGGGACAGGAACAGAACT GGCCGAAGTGTGTGCTCGACGACCTTAAGGCATTCGGGGCCGACCACGGA TCTACGAAAACCGATCCATGCTATCTCGGAATCCCGGTACCGAAAGACAC GGCACCGAAGTTAAGGTGGACGGAAGCCGCGAAGGTAGAGAAGGGAGTAC CCTGGCAGGCGGCGTTGCTGCAGGGAGCTGAGAGGTTCATGACCTCCTGG CACAAGAAGGAGAGGCCACCGACAACGGGCGGTCAAACGAAACCACAAGC CATCAACCAATGGGGCGGGAGGGGGGCAGGAGACGGACGAGACGGCGAGG GAAGAAAGCAAACGAGAAGAGACGGACCGAGTGGCGCGATACGTGCCGGA ATGAATTTCTTCTAGCCATTTCCCCCCCGCCCCAACGCTGCACCATTGCA CCAACCCCCCACTAGTGATGACGTACNTCCGGCCTGGTCCCTTTTTGTCC TCGCTCTTTTTATTTGATTTTCTCTTTCGTTACTGTTTCCTCTTATTTTC TTCTCTTTTTCTCTTTTTTGTCTCTTTCTGTGCCAGATGGCCTTGTCTCT GCTTGCGTTGTGAAGTACCAAGATTGAACCAAAAGGAGGTGTACCTCATT CTCTCCGGCCCGTGATGGTGACTCCTAGTCTCAGTTGTTACCTCGCATAG CGCGCAGAGGGAGTGGAGGACTCCAGAATATCTGTCGTTAATTTCTATTG ACTTGCGGACCCCTCGGGGCCATTTTATCTGAGTGTACCTTGTAAGGGCG AGAGGTCATGAGTCTAGCATTTACTTACGCACCTGTTACCTTTGCTTCAC ACACATTGTCCTTCACAACTTGAGAGTGAGGGGTATCGTGAGCCTATACC TATCTACCACCTGTTTCTTATGCTTTACACTCTTCACAACTTGCGACTGA GAGGTATCTTGCGCCCTATAGCCATCATTGCTATGCTCACCCTTCCCTTG AAACAGAGCAAGAGGTATCGTAAGCCTAGCCCTACCCCCCACCTGTCATC TTCGCTTCACTCACATTTTCCTTCACAACTTGAGACTGAGAGGTATCATG AGCCTAGCCCAATCTACCACCTGTTATGTCCGCTTTACTCACACTTTAGT GCTGCACTTC back to topprotein sequence of EsuBft1005_10a-0001 >EsuBft1005_10 ID=EsuBft1005_10|Name=EsuBft1005_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=529bp
MVVATVNLGGRLAHNRAVRTEPKQKQFNRRELQFEAARCAVTNRFLLNLD TRPDERTTTAAELATDFTNALLDAARTTLGEEPRRRRTQEWCETPETRAA LEQALTKRREARRAMRGNWNSATCRVLKAACKGVATAVGTGIYAHLDGYI TELEEIYKDRDMRGLYQHLKRSVGLSRRQAGGQQFVADENGVLLRNRDDI LQRWARFFRTLLNTKSPTLNPXKDRDMRGLYQHLKRSVGLSRRQAGGQQF VADENGVLLRNRDDILQRWARFFSTLFNTKSPTLNPDIIERVTQRPATRD TQRLGDVPELEEVARATKGLKNWKALGHDSLPAELLKIDDDEPFVLGHLH TILVKVWNGGDIPREWKDATIKVLYKKGDRSNCNNYRGISLLSCRRGPHQ DHHQPSKRLLRSQQHPPGGTARISTQAINRRHAGRDSREADRSHPPIPRX XXXXXXXXXXXXXXXXXXXETPLDRVRRAVWGMLYADDAGVVSRSAEGLA RMMTIIVEVFGEFGLTVSEKTTETLLMRA back to topmRNA from alignment at Scaffold_576:189229..192982- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1005_10a-0001 ID=EsuBft1005_10a-0001|Name=EsuBft1005_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3754bp|location=Sequence derived from alignment at Scaffold_576:189229..192982- (Ectocarpus subulatus male Bft15b) ATGGTAGTAGCCACCGTCAACCTCGGTGGCAGGCTTGCCCACAACCGTGC
AGTCCGGACTGAACCGAAACAGAAGCAATTCAACCGACGGGAATTGCAGT
TCGAAGCAGCACGGTGTGCGGTGACTAATCGGTTCCTCCTCAACCTCGAC
ACACGACCGGACGAGCGAACAACCACCGCCGCGGAATTGGCGACCGACTT
CACCAATGCTCTCCTCGACGCAGCGCGGACGACCCTGGGGGAGGAACCGC
GGAGACGCCGCACGCAGGAGTGGTGTGAGACCCCAGAGACGCGAGCAGCG
CTGGAGCAGGCCCTTACCAAACGTCGGGAAGCGCGCCGGGCGATGAGGGG
CAACTGGAACTCAGCGACGTGCAGGGTTCTCAAAGCAGCGTGTAAGGGAG
TGGCTACAGCAGTCGGAACGGGCATTTATGCCCACCTGGACGGATATATA
ACTGAGCTCGAAGAAATCTACAAAGATCGCGACATGCGAGGACTGTACCA
ACACCTCAAGAGATCAGTGGGCCTCAGCCGGAGACAAGCGGGGGGACAGC
AGTTCGTCGCGGATGAGAACGGTGTGTTGCTCCGGAACAGGGACGACATC
CTCCAGCGGTGGGCGAGATTCTTCAGAACCCTACTCAACACCAAATCCCC
AACCCTGAACCCANACAAAGATCGCGACATGCGAGGACTGTACCAACACC
TCAAGAGATCAGTGGGCCTCAGCCGGAGACAAGCGGGGGGACAGCAGTTC
GTCGCGGATGAGAACGGTGTGTTGCTCCGGAACAGGGACGACATCCTCCA
GCGGTGGGCGAGATTCTTCAGCACCCTATTCAACACCAAATCCCCCACCC
TGAACCCAGACATCATCGAACGGGTGACGCAGCGGCCAGCGACACGTGAC
ACTCAACGGTTGGGAGATGTGCCAGAACTCGAGGAGGTGGCACGGGCAAC
GAAAGGCCTCAAGAACTGGAAGGCACTCGGCCATGACTCCCTCCCTGCCG
AGCTGCTCAAGATCGATGACGACGAACCCTTCGTCCTGGGACACCTCCAC
ACCATCCTCGTCAAGGTTTGGAACGGAGGAGATATTCCGCGAGAGTGGAA
GGATGCAACCATCAAGGTGCTGTACAAGAAGGGCGACCGATCCAACTGTA
ATAACTACAGGGGAATTTCGCTACTCTCATGTAGGCGAGGTCCCCATCAA
GATCATCACCAACCGTCTAAGCGCCTTCTGCGAAGCCAACAACATCCTCC
CGGAGGAACAGCGCGGATTTCGACCCAAGCGATCAACCGTCGACATGCTG
TTAGTCGTGCGCCGCCTCCAGGAGCTGGGGCGGAGAAAAAAAATACTGCT
CCACATGTGCTTCGTCGACTTGAACAAGGCGTATGATTCGGTGGACCGAN
GCCTCCAGGAGCTGGGGAGGAGAAAGAAAATACCGCTCTACATGTGCTTC
GTCGACTTGAACAAGGCGTATGATTCGGTCAACCGAGAGGTGCTATGGAA
GGTGCTTGCCAGGGCCGGGATTCCCGCGAAGCTGATCGAAGTCATCCGCC
AATTCCACGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGGAGACACCCCTTGACCGAGTACGGAGGGCA
GTATGGGGGATGCTGTATGCCGATGATGCCGGCGTCGTATCGAGGTCTGC
AGAAGGACTGGCCAGAATGATGACCATCATCGTTGAGGTGTTCGGGGAGT
TCGGGCTAACGGTGTCGGAGAAGACGACGGAGACGCTCCTGATGCGCGCA
TAGGACAAGCCGACTACAACATCACAGCCCGGCCCGCTTCCTACACTGAC
CATCGAAGCCGCGGGACAGAAATACGCCCAGACGACCGAGTTCCGGTACC
TCGGTGGCCTCGTCAACGAACATGGCGACCTCACCCGGGAGATCAACTAC
AAGAGCAGAGGAGCGTGGGCGTGCCTCAGGCGATATGGCCGGGAGCTCTT
CGACAGACCGCAAGCGCCATTCCGACTCAAGATCCGCCTGCTCCAGGCGG
AGGCGATGGAGGCACGGTTGCATGACATGGTCACCACTCAGCGGCCACTA
TCAGACGCTGCGGTCGATACATCACCGACTGCTCCTTCGAGCTAACGGGT
ACAAGCGCAAGAAAGACACCTACCGGCAGCTCTCTTACGCCCAGACGCTG
AAGAGGGTCGAATGTCAGAGCGTTGAAGCCACGATCCGACAACGACGCCT
ACTGTTCGCGGGAGCATTGGCAAGGCAGCCGGACGGTCGACTCCCGAAGC
GAATGATGTTCGGCGAACTGGCAGGGGGGGAGAAGCGACGTAGGGGGGGA
CAGGAACAGAACTGGCCGAAGTGTGTGCTCGACGACCTTAAGGCATTCGG
GGCCGACCACGGATCTACGAAAACCGATCCATGCTATCTCGGAATCCCGG
TACCGAAAGACACGGCACCGAAGTTAAGGTGGACGGAAGCCGCGAAGGTA
GAGAAGGGAGTACCCTGGCAGGCGGCGTTGCTGCAGGGAGCTGAGAGGTT
CATGACCTCCTGGCACAAGAAGGAGAGGCCACCGACAACGGGCGGTCAAA
CGAAACCACAAGCCATCAACCAATGGGGCGGGAGGGGGGCAGGAGACGGA
CGAGACGGCGAGGGAAGAAAGCAAACGAGAAGAGACGGACCGAGTGGCGC
GATACGTGCCGGAATGAATTTCTTCTAGCCATTTCCCCCCCGCCCCAACG
CTGCACCATTGCACCAACCCCCCACTAGTGATGACGTACNTCCGGCCTGG
TCCCTTTTTGTCCTCGCTCTTTTTATTTGATTTTCTCTTTCGTTACTGTT
TCCTCTTATTTTCTTCTCTTTTTCTCTTTTTTGTCTCTTTCTGTGCCAGA
TGGCCTTGTCTCTGCTTGCGTTGTGAAGTACCAAGATTGAACCAAAAGGA
GGTGTACCTCATTCTCTCCGGCCCGTGATGGTGACTCCTAGTCTCAGTTG
TTACCTCGCATAGCGCGCAGAGGGAGTGGAGGACTCCAGAATATCTGTCG
TTAATTTCTATTGACTTGCGGACCCCTCGGGGCCATTTTATCTGAGTGTA
CCTTGTAAGGGTAAGTTAGCCTGCGACCACGGGAATCGACCGCCGCGAGT
GTTGTATCAGTACGGACATACGAAGGTACTGGTAGAGAGAGATCGAAACG
GTTTTGAATGTGAAGACAACAACAACACAGTTCCGTTGCTTTTCTCAAAC
CTTCATTGACAACTTGAAGGCGAGAGGTATTGATGCTTGTTATGGTGCGG
AGCGGAGTCCTCGACAACTCGAGACTAAGAGTCGGTGGTATCATGAGCCC
CTACTTAGTTGCGTTGCCAAACCTTCATTGACAACTTGTAGGCGAGAGGT
CATGAGTCTAGCATTTACTTACGCACCTGTTACCTTTGCTTCACACACAT
TGTCCTTCACAACTTGAGAGTGAGGGGTATCGTGAGCCTATACCTATCTA
CCACCTGTTTCTTATGCTTTACACTCTTCACAACTTGCGACTGAGAGGTA
TCTTGCGCCCTATAGCCATCATTGCTATGCTCACCCTTCCCTTGAAACAG
AGCAAGAGGTATCGTAAGCCTAGCCCTACCCCCCACCTGTCATCTTCGCT
TCACTCACATTTTCCTTCACAACTTGAGACTGAGAGGTATCATGAGCCTA
GCCCAATCTACCACCTGTTATGTCCGCTTTACTCACACTTTAGTGCTGCA
CTTC back to topCoding sequence (CDS) from alignment at Scaffold_576:189229..192982- >EsuBft1005_10a-0001 ID=EsuBft1005_10a-0001|Name=EsuBft1005_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1590bp|location=Sequence derived from alignment at Scaffold_576:189229..192982- (Ectocarpus subulatus male Bft15b) ATGGTAGTAGCCACCGTCAACCTCGGTGGCAGGCTTGCCCACAACCGTGC AGTCCGGACTGAACCGAAACAGAAGCAATTCAACCGACGGGAATTGCAGT TCGAAGCAGCACGGTGTGCGGTGACTAATCGGTTCCTCCTCAACCTCGAC ACACGACCGGACGAGCGAACAACCACCGCCGCGGAATTGGCGACCGACTT CACCAATGCTCTCCTCGACGCAGCGCGGACGACCCTGGGGGAGGAACCGC GGAGACGCCGCACGCAGGAGTGGTGTGAGACCCCAGAGACGCGAGCAGCG CTGGAGCAGGCCCTTACCAAACGTCGGGAAGCGCGCCGGGCGATGAGGGG CAACTGGAACTCAGCGACGTGCAGGGTTCTCAAAGCAGCGTGTAAGGGAG TGGCTACAGCAGTCGGAACGGGCATTTATGCCCACCTGGACGGATATATA ACTGAGCTCGAAGAAATCTACAAAGATCGCGACATGCGAGGACTGTACCA ACACCTCAAGAGATCAGTGGGCCTCAGCCGGAGACAAGCGGGGGGACAGC AGTTCGTCGCGGATGAGAACGGTGTGTTGCTCCGGAACAGGGACGACATC CTCCAGCGGTGGGCGAGATTCTTCAGAACCCTACTCAACACCAAATCCCC AACCCTGAACCCANACAAAGATCGCGACATGCGAGGACTGTACCAACACC TCAAGAGATCAGTGGGCCTCAGCCGGAGACAAGCGGGGGGACAGCAGTTC GTCGCGGATGAGAACGGTGTGTTGCTCCGGAACAGGGACGACATCCTCCA GCGGTGGGCGAGATTCTTCAGCACCCTATTCAACACCAAATCCCCCACCC TGAACCCAGACATCATCGAACGGGTGACGCAGCGGCCAGCGACACGTGAC ACTCAACGGTTGGGAGATGTGCCAGAACTCGAGGAGGTGGCACGGGCAAC GAAAGGCCTCAAGAACTGGAAGGCACTCGGCCATGACTCCCTCCCTGCCG AGCTGCTCAAGATCGATGACGACGAACCCTTCGTCCTGGGACACCTCCAC ACCATCCTCGTCAAGGTTTGGAACGGAGGAGATATTCCGCGAGAGTGGAA GGATGCAACCATCAAGGTGCTGTACAAGAAGGGCGACCGATCCAACTGTA ATAACTACAGGGGAATTTCGCTACTCTCATGTAGGCGAGGTCCCCATCAA GATCATCACCAACCGTCTAAGCGCCTTCTGCGAAGCCAACAACATCCTCC CGGAGGAACAGCGCGGATTTCGACCCAAGCGATCAACCGTCGACATGCTG GCCGGGATTCCCGCGAAGCTGATCGAAGTCATCCGCCAATTCCACGATGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNGGAGACACCCCTTGACCGAGTACGGAGGGCAGTATGGGGGATGC TGTATGCCGATGATGCCGGCGTCGTATCGAGGTCTGCAGAAGGACTGGCC AGAATGATGACCATCATCGTTGAGGTGTTCGGGGAGTTCGGGCTAACGGT GTCGGAGAAGACGACGGAGACGCTCCTGATGCGCGCATAG back to top
|