Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 36080.S2K9M0 |
| ProteomeId | EsuBft1012_7 |
| Protein domains | IPR026057 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | protein trichome birefringence-like 21 os:arabidopsis thaliana gn:tbl21 pe:3 sv:1 [Automatic annotation] |
| Nb exon | 7 |
| Max annot lvl | 4751|Fungi |
| Length | 1289 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.56e-12 |
| EggNOG OGs | 2DIAT@1|root,2S5Y9@2759|Eukaryota,3A7BT@33154|Opisthokonta,3P5G3@4751|Fungi,1GTTD@112252|Fungi incertae sedis |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Mortierella verticillata NRRL 6337 |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1012_7a-0001 ID=EsuBft1012_7a-0001|Name=EsuBft1012_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1289bp|location=Sequence derived from alignment at Scaffold_561:51469..55957- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGTATCCAGCCCTTGTCGTCGACTGCGCAAGCGTCGAAACCGACCTCGGC
TTGCCGCCGTGCTACTCGAGCACGGCCGCTGATCCTTCCCGAGGGAGATG
GAACGAGTGCATGGGAGGCATGGACGGTCGCCGACGAACACGGGCAGTGG
CCCATTTGTTACCGGTCGAACGGCGGAAGGGTGTGGCAAAAGATGGGCAG
CAGAGCATGAGGGCGAAGAGCCCGTCCCCCCCATGCCGTACTGGAAGTGG
GAGCCTTCGGCGTGCCGTCTGGAGGAGGTGGACGAAGCCAAGTTCTGCCG
CGTTATGAAGGGGAGGAAGGGGTTGCTGTTCGCAGGGGACAGCCTGACGG
GTGAGATGATCGATACTCTAAGGGCGGTCTTGCGCGCGACGCGGGTCAAG
CACGTTAAACTGAAGATGGACACGTACACAGCCTGCGACGGAGAGCTGAC
GCTCTCGTGGTACCGCAACGATTACCTCGACACGCGATTGGACGGCTTCG
ACACGCCGCGCTGCGAGGAGCCCGACATCAGCATCTCGCAGTGCATGACA
TATGATGCTACCTTGAGCCAATATGACACCCTCCTCGTCAACGCTGGGGC
GCACCGTCAATTGGGGGGGGTGGAGGCGTACGGGTCGATGATAAAGACCG
CTGCCGAGAGCCTGACCGCGTCGATGAGACGGTTACACGGGGATAGCGCC
ATCTTGGTGGTCAGAAACACCGTCCCGGGTCACGGCGAGAGCTTCGATAG
GATGTTCACCGGGCCTGTCAATTTAGACACGGCCCTCGACCTCGTCGAGA
AAGGCCCGCCGGAGTTCGAGTGGACGACGATCAGAGATAAGAACACGCTC
CTGGAGGAAGCGTTCGACGCCACGCATGGCCGGACGCTGCTGGATGCCTA
CTCGCCGACAATCCTGAGGGCAGACTCCCACGCCTCAGCAACAGATGGCC
TGCACTACTGCTTGCCTGGGCCTATTGACCACTGGGTGGTTCTGTTGTAC
AATATTCTCCTCGAAAAAGTGAATAGTGACAACAAATAGATTTGAATCTT
GTTTGTTTTGTTTGTACTGTTGGTACTCTCTGCGCATGAAGAGCGTTGTG
GTTTGACCCAGCGTGAGTCACAGTACGACGTGACCTAGCATGAGTCACAG
CAGTAGTAGTTGTAGCTCTCTTTGCATCAAGAGCGTACTGGTTTGTATTC
GCTAACCCCTTCGTCCCTGCGCTTTGGAGGCAGGGAAAATAGATTCCTAA
TATTCGCAACCTGACCCAGCGGGTGGTTGTTGCCTAGTC back to topprotein sequence of EsuBft1012_7a-0001 >EsuBft1012_7 ID=EsuBft1012_7|Name=EsuBft1012_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=313bp
MERVHGRHGRSPTNTGSGPFVTGRTAEGCGKRWAAEHEGEEPVPPMPYWK
WEPSACRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRV
KHVKLKMDTYTACDGELTLSWYRNDYLDTRLDGFDTPRCEEPDISISQCM
TYDATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTASMRRLHGDS
AILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTIRDKNT
LLEEAFDATHGRTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLL
YNILLEKVNSDNK back to topmRNA from alignment at Scaffold_561:51469..55957- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1012_7a-0001 ID=EsuBft1012_7a-0001|Name=EsuBft1012_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4489bp|location=Sequence derived from alignment at Scaffold_561:51469..55957- (Ectocarpus subulatus male Bft15b)
GGTATCCAGCCCTTGTCGTCGACTGCGCAAGCGTCGAAACCGACCTCGGC
TTGCCGCCGTGCTACTCGAGCACGGCCGCTGATCCTTCCCGAGGGAGATG
GAACGAGTGCATGGGAGGCATGGACGGTCGCCGACGAACACGGGCAGTGG
CCCATTTGTTACCGGTCGAACGGCGGAAGGGTAAGATGAAGGCTTTCGTA
TCCCGTGCGTGATGGCCGTAGGGCTTACCAGCTGCTTGTGGTATAGCCGC
CGAGCGCAACAACGGCTGTAAGGCCACCCCACTAGAGTTTTGGTAGCCTT
GGGGGCTTTTTTTTTCCTGTTAGCCCTGCGGTGAATCGTACACGCACGTG
AGCACGTCTCTATTTAGTCGTCCACCGTCCGCTACTACAACGGTGTGCTC
AACTCGTACGTATATATGCCCGACGTAAGCTGCAACCCGCCGCAGTCGAC
CCTACCGTTGTGTGTTTTCTGTTGTTGATTAAAAAAATCGTTGATAAAAG
GCGTCGGTGCGTCGAACCAAGTCCAATTTTCGCGATAAGTCTGGACCGGC
CAGCTCGAAACCGTCGATGAGGAATTCTTTCAAAAATATCTCCGTCGCCT
GTGTTTCGTCTAGATTGTGCGTTACGGCAGTGACAAGCCCAGTCGTACGA
CACAAGTACGCACAACACGGGAGGTGCATGTGTTTATTGTGACGTCCACT
GTTGTGTCTGAAACACCGCGCGCTCGCAACAGGTGTGGCAAAAGATGGGC
AGCAGAGCATGAGGGCGAAGAGCCCGTCCCCCCCATGCCGTACTGGAAGT
GGGAGCCTTCGGCGTGCCGTCTGGAGGAGGTGGACGAAGCCAAGTTCTGC
CGCGTTATGAAGGGGAGGAAGGGGTTGCTGTTCGCAGGTGAGAGCCACAT
GGCTACGTGAAGGACCACCCCCGAAGGAACACGGCCGCTGGTGCACGGTG
CTGTTGTGCCTTTGCCCGCTCAGAAGANGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCG
AGACGTGCGAGGCAGGTGAGATATATCTCACCTGAACACCGATGGAGAAA
AGCCCGCGTTACAAAAATAATTCAACAAATTTTGTTTCCTCTGCTCGCAA
AGGCTAGGGGAAGATGATTTTTGGCACACGTGCAAGGAAACCACAAGATC
TGACGGGATGGTCGGTGGATCTGCAGACCCACAACCTGCTATGCATTCTC
CTGCCCTGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCGCCT
AGGGGACAGCCTGACGGGTGAGATGATCGATACTCTAAGGGCGGTCTTGC
GCGCGACGCGGGTCAAGCACGTTAAACTGAAGATGGACACGTACACAGCC
TGCGACGGAGAGCTGACGCTCTCGTGGTACCGCAACGATTACCTCGACAC
GCGATTGGACGGCTTCGACACGCCGCGCTGCGAGGAGCCCGACATCAGCA
TCTCGCAGTGCATGGTCTTTGCAGGCATGTTCCTTCGGTCGTGGCTCCGA
TATGAGAGGGGGACCTTTTAAGAGGGGGCTCCGACGTCCAAGAGGGTCGC
AAATCGGTCGTCACGGACTCGATCCACACCAGACATGTTTGCGCAGCACA
TCGTGCGGTTGGGAACCTCTAGCGTGCCTTGTCCCATCGGAGAAACTCTT
GGCCTCGCCTGTCGGTGTGCTTGTGCTGGTAGTGTTGTCGTTCGGAAGCC
GCAGCTCTGCGTTGTCGGTGATATTGTTGCAGCTAGACCCATGATGGTGC
AACAACAGCGTTCCGCATTGTTGTCGTCTGCGCCATGTCGGTGCCGAACG
ACATGGTTGCGTGATTTGTTTTTATTCTCGCGAATGATTCTGCCGTGAGC
CAGCTCCGAATCGATCTTGATGACGACGTAACGTCAAGACTGCTTTCATC
GTTTCTCGCAGATGATGCTACCTTGAGCCAATATGACACCCTCCTCGTCA
ACGCTGGGGCGCACCGTCAATTGGGGGGGGTGGAGGCGTACGGGTCGATG
ATAAAGACCGCTGCCGAGAGCCTGACCGCGTCGATGAGACGGTTACACGG
GGATAGCGCCATCTTGGTGGTCAGAAACACCGTCCCGGGTCACGGCGAGA
GCTTCGATAGGTGGGAGACGGGTCCAGGGGATGTTGGCTAAGCCATTACG
GAGGCTGAAAAACAAGTTCAGTTTTCATACGTGATGACTTTGGGAGGCAT
GCGAACGTACGCTATGGATATTTATATTTCGAGGTCTTACACGCGGGACA
GGTCGCCTGAAGTATTTCTGCGCAATCGTTTGTGTCTAGTTCGTCCCGCT
TCGAGCATCGATGTGTGCATCGCGCGGTGTTATTTCAACAGTTGCAGATC
TAAATAAACGGCGGGAGATCATTTTTATGGGGCAACACAGGCAGCACGTG
CTGTCATTCGTCGTCGCTTGAATCCGTAACCTGCCATCATTCTTGTATCC
GGCGTTGTTCACCTCCGGCGACATGTGGTGTAGTGTTTTTCTCTTGCTTC
ACATCTCCGCTCCATGAAATGAAACAAGCAGTCCTGCCGAGCCCGAGCAG
AGCAATGCTACCCGCACGCGCTCATTCGATTTCTTTCTTTGGCAGTCCAG
TTTTTTCCACATCTGTCTTTTTTTGGTCGCGGCAATTGTTCCCTCCCTCA
CCAACTCGTATCTACACTTTGCTCCGCTGCCGAATATGAGGAAGAGGTTA
TTGTCGTGCCCGAAAAGCTTGAGTCGCGACAACGTTTTTTTTTATCTGTG
CCACTTTGCGTAACAGGATGTTCACCGGGCCTGTCAATTTAGACACGGCC
CTCGACCTCGTCGAGAAAGGCCCGCCGGAGTTCGAGTGGACGACGATCAG
AGATAAGAACACGGTAAGGTTCTCATTCTTTTTTTATCTTGGCGCCGTCG
TCGCGTGTGAAGATTAGCAAGGGTCGGGGAGAGGCCTCAGAGTCGATCTT
GCTTGTTGCGGGAGGGAGCCCAAGAAACCGCGCCGCGTGTACGCTGCGAT
AGGCTCGTCCTCGCCTCTTGTGTGATTTTCATATCAAACGGAGTAGACTA
CACGGCAGCAGTGTAAATAGTCGGTCTTGCTGATTTTGTAGCCCAGAACG
TTGAACAGCCAGCCTTTCCAGGGTGCGAGTCAAGGTCAAAAATTGGAAGT
GTTTTCACCCCCATCCTGCTCCAAACCATGTGCCGTCTCTAGACTCTTCT
AGCGTAGCCTTGTGGGATGGTTATGATTGGTTGTCCTTCTGCTGCTCTTC
TTCGTTTCTCGGCAGGCAATGGGCGCCCTCGAAGAATCCATATGGGTACT
ATATATGTTTGCATTTACGCTTTTGCTCCGAAGCCGCTGCCCGTGTGCCC
CTCTTGGCCCACTGAGCACATTGCCTCCTTTTCACATTCCTTGTGGTCCG
AGAGGGTTGTCCGTTTTTTTCTTGTTCTCTGTGTGCTTGTGTGTCTCTCT
TCCGTTAGCATCGGCCGCACTATCCGACTCACCAACGACAAGGCACCGCT
CTCGCTGCAGCGGGACGAAAAGTCGCGATTTCGCTTCCTTTTTTTTTGTC
CGCGGATCCCCCGACAGGAGGGCCGCGGAGGAACTCGGACTTGAGGGTCA
TGTCTCAGGATACACACTACTTCAGTTTTGTTCGCAACCAGTGTGTGTGT
GTGTGTGTGTTTTTTTTTTCTACACTGCTGTGTCACGAGAAAGACACAAC
TCTATCGATGGACTAGAGTCCACTGTCAACCAAGAGTTGACTTCATGATG
GCGGCTGCTAAATAGTCCACTGCTGTTTCTACGTTTTTTCCGCGAACATG
GCATCTCACTCTCCCCTGTGGGTAACAGGCTCAACCTCATATGCCTTGCA
CAACAGTAGATAGATCGTGTTCACAGAGTAGATCGTGTTCTTAACGTTTG
CGTGTGCGCCCGCTCTTGGATGTACCGTCTCTATGTTGAAACCAAAGCTC
CTGGAGGAAGCGTTCGACGCCACGCATGGCCGGACGCTGCTGGATGCCTA
CTCGCCGACAATCCTGAGGGCAGACTCCCACGCCTCAGCAACAGATGGCC
TGCACTACTGCTTGCCTGGGCCTATTGACCACTGGGTGGTTCTGTTGTAC
AATATTCTCCTCGAAAAAGTGAATAGTGACAACAAATAGATTTGAATCTT
GTTTGTTTTGTTTGTACTGTTGGTACTCTCTGCGCATGAAGAGCGTTGTG
GTTTGACCCAGCGTGAGTCACAGTACGACGTGACCTAGCATGAGTCACAG
CAGTAGTAGTTGTAGCTCTCTTTGCATCAAGAGCGTACTGGTTTGTATTC
GCTAACCCCTTCGTCCCTGCGCTTTGGAGGCAGGGAAAATAGATTCCTAA
TATTCGCAACCTGACCCAGCGGGTGGTTGTTGCCTAGTC back to topCoding sequence (CDS) from alignment at Scaffold_561:51469..55957- >EsuBft1012_7a-0001 ID=EsuBft1012_7a-0001|Name=EsuBft1012_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=942bp|location=Sequence derived from alignment at Scaffold_561:51469..55957- (Ectocarpus subulatus male Bft15b)
ATGGAACGAGTGCATGGGAGGCATGGACGGTCGCCGACGAACACGGGCAG
TGGCCCATTTGTTACCGGTCGAACGGCGGAAGGGTGTGGCAAAAGATGGG
CAGCAGAGCATGAGGGCGAAGAGCCCGTCCCCCCCATGCCGTACTGGAAG
TGGGAGCCTTCGGCGTGCCGTCTGGAGGAGGTGGACGAAGCCAAGTTCTG
CCGCGTTATGAAGGGGAGGAAGGGGTTGCTGTTCGCAGGGGACAGCCTGA
CGGGTGAGATGATCGATACTCTAAGGGCGGTCTTGCGCGCGACGCGGGTC
AAGCACGTTAAACTGAAGATGGACACGTACACAGCCTGCGACGGAGAGCT
GACGCTCTCGTGGTACCGCAACGATTACCTCGACACGCGATTGGACGGCT
TCGACACGCCGCGCTGCGAGGAGCCCGACATCAGCATCTCGCAGTGCATG
ACATATGATGCTACCTTGAGCCAATATGACACCCTCCTCGTCAACGCTGG
GGCGCACCGTCAATTGGGGGGGGTGGAGGCGTACGGGTCGATGATAAAGA
CCGCTGCCGAGAGCCTGACCGCGTCGATGAGACGGTTACACGGGGATAGC
GCCATCTTGGTGGTCAGAAACACCGTCCCGGGTCACGGCGAGAGCTTCGA
TAGGATGTTCACCGGGCCTGTCAATTTAGACACGGCCCTCGACCTCGTCG
AGAAAGGCCCGCCGGAGTTCGAGTGGACGACGATCAGAGATAAGAACACG
CTCCTGGAGGAAGCGTTCGACGCCACGCATGGCCGGACGCTGCTGGATGC
CTACTCGCCGACAATCCTGAGGGCAGACTCCCACGCCTCAGCAACAGATG
GCCTGCACTACTGCTTGCCTGGGCCTATTGACCACTGGGTGGTTCTGTTG
TACAATATTCTCCTCGAAAAAGTGAATAGTGACAACAAATAG back to top
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