EsuBft712_7a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft712_7a-0001 ID=EsuBft712_7a-0001|Name=EsuBft712_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1840bp|location=Sequence derived from alignment at Scaffold_548:229668..234881+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GCTAAGCTTGCGCAGAGCGGCAGCAGTGTGTGTAAGAGCAAACCCGGCAG
CCATGGCGACTAGGGTTGGGTTGATTCGGGCCCGGGGCCATTCATGTCGG
GCTCAGCTCGTGCATGGCCCGCTGCAGAGCTCGATCAGCGGTGTGCGGTT
GCTGGCCCGCCTCTCCTCCTCTTCGCGCAACACTGCTGTAAAGGGCAGCC
CCAGCGGCAGAAGCAGCAGTGCTCCCTTAGCGTTTCGCCCTCCCGATCGT
AGACACCAGTATCCCGCGTCGTCGATTTTTCTGGGGAGAAGCGACAGCGG
CAGTGGCGGCAAGGCTCTGTTCTCGTCGACTACAGCAACCAGGCCTGCTC
ACGAGGAAGGAGCTGCGCAGGACTCGGACCCGGGCCGCAGCAGCAGTAGC
AGCAACAACAACAAACCGGGGCGAAAGACGTTTGATGGGAAAGACAACGA
CGACAGGCTCGCTAGGCTGGACGATGGGGATAAGTACGAGGACTTCTTCG
ACCTCCGGCTAGCGGAGGCGGAGACCATCTTCCCGGAGGGCCTCGCCGGC
GGCAGGCAGGGCGCCCTGGAGCGGGCGATGGCCGGCGGCACGTCCACGGC
GCTCCTCCGCCGCGAGGCTGCGGACGCGCTGATCCACTCCCTCGACGCCT
TCGCACCAGAACACGGGGGGGCGGTGCCGCCGTTCGGCATCGAAGGCACC
TCCAGCGAGAACTGGCGCAAGGCTTGCGAGGCGAGGCAGTACGGCAGCCA
GCAGGACGGCGGTGGGTCTAAAGCAGGCGCGGCAACGGCGGCGGCGGCAT
CGCCAGACGATGAAGATCGGGACGACGGCGGCGATGATGATGACATCATC
GGGGATGTGAAGGCAGCGGCCGCGGAGGGGGCGGCGGCGGCGGCGGCGGC
GGCCGAAGCAGTTAAGGCGGCGGCCACGGCCGCGGCGGCGGCGGCTGCGG
GCGGGGAAGGGCCGGAGCAGGAGGAGGGGAGGGGAAGAGAGGACAAGAAG
GTCCTCGGGAGCGGGCCGGTATGGGAGGAGATGAAGGCTTTGGCGGAGTC
GAAACGAAAACCGCTCAAGGGCGTTCGACGCGTGGTGATCCAGCCTGGTC
AGGGCGGCGGGGCTCCGGCAAGAGCTGCGTCCTCAATCATGCCGTCCTCC
ACGCCAGCACCTGCCCATCCCACTCTCCGTTCCCCCCCGCCTGTCTTGCA
GTCTATGAAGAGACTCAAGACTCTTCGGGAAGCTCACGGCGACCAGCTCA
AGAACATCAGCATCAAGGACCCCGAGGTGCTCGGCCGGCATGAGGGCGCC
AAGACGCTGCTGGACGTGATGGACATGGGTCTGGCGGACCAAGAACACGC
GGGGACGGCTCACTACGACGTGATGAGGGAGTTGCTGGCGACCACGGAGG
CGAAGGTGATGCTGGCCATCGACGAGTACAACGAGCTCTTCCAGATGTCC
CACTGGTACTACGGAGACAGCAAGGCGAGTGCTGCAGTATCGCGGCTGGA
AGCGCCGCACCTCACGGCAACCCTGCCGCTCCTGCCGCCTTTGGTCTCGA
CCGGCACTGGCCTGGCCTTCGCGGACGACTCGGTGGCGGCCCTTGCTAAC
CCGGAGGTGGTCGCCGAGACAAAAAGAACTCCTGCAGAGGCGGGGGGGGG
GGCCTGGATGAGCCCGGAGACCGGGGCGGCTTGCCTGCCGCCACCGCCGG
CGAACGGCATCGTGGTTTGCGCCGTGTCCGGGAGGTACCCTCCGGTGAAG
AGGCTGAGGAAGAACAAGAAGTGGGTCCCGTTCGAGGCCACCGCGGGCCG
GCTGGCGCAAGCCGTATCGGTAAGGGTTTGTTGCAGTTGA
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protein sequence of EsuBft712_7a-0001

>EsuBft712_7 ID=EsuBft712_7|Name=EsuBft712_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=595bp
MATRVGLIRARGHSCRAQLVHGPLQSSISGVRLLARLSSSSRNTAVKGSP
SGRSSSAPLAFRPPDRRHQYPASSIFLGRSDSGSGGKALFSSTTATRPAH
EEGAAQDSDPGRSSSSSNNNKPGRKTFDGKDNDDRLARLDDGDKYEDFFD
LRLAEAETIFPEGLAGGRQGALERAMAGGTSTALLRREAADALIHSLDAF
APEHGGAVPPFGIEGTSSENWRKACEARQYGSQQDGGGSKAGAATAAAAS
PDDEDRDDGGDDDDIIGDVKAAAAEGAAAAAAAAEAVKAAATAAAAAAAG
GEGPEQEEGRGREDKKVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQ
GGGAPARAASSIMPSSTPAPAHPTLRSPPPVLQSMKRLKTLREAHGDQLK
NISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEA
KVMLAIDEYNELFQMSHWYYGDSKASAAVSRLEAPHLTATLPLLPPLVST
GTGLAFADDSVAALANPEVVAETKRTPAEAGGGAWMSPETGAACLPPPPA
NGIVVCAVSGRYPPVKRLRKNKKWVPFEATAGRLAQAVSVRVCCS
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mRNA from alignment at Scaffold_548:229668..234881+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft712_7a-0001 ID=EsuBft712_7a-0001|Name=EsuBft712_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5214bp|location=Sequence derived from alignment at Scaffold_548:229668..234881+ (Ectocarpus subulatus male Bft15b)
GCTAAGCTTGCGCAGAGCGGCAGCAGTGTGTGTAAGAGCAAACCCGGCAG CCATGGCGACTAGGGTTGGGTTGATTCGGGCCCGGGGCCATTCATGTCGG GCTCAGCTCGTGCATGGCCCGCTGCAGAGCTCGATCAGCGGTGTGCGGTT GCTGGCCCGCCTCTCCTCCTCTTCGCGCAACACTGCTGTAAAGGGCAGCC CCAGCGGCAGAAGCAGCAGTGCTCCCTTAGCGTTTCGCCCTCCCGATCGT AGACACCAGTATCCCGCGTCGTCGATTTTTCTGGGGAGAAGCGACAGCGG CAGTGGCGGCAAGGCTCTGTTCTCGTCGACTACAGCAACCAGGCCTGCTC ACGAGGAAGGAGCTGCGCAGGACTCGGACCCGGGCCGCAGCAGCAGTAGC AGCAACAACAACAAACCGGGGCGAAAGACGTTTGATGGGAAAGACAACGA CGACAGGCTCGCTAGGCTGGACGATGGGGATAAGGTGTGTTGACGGTGTA GCGTTCTGTCTGCAAAAGTATTTCGGTGTCCATTTTGGTCGGAGTGCGCG TGGTTGCCATGTACAGGGAGGCCGAGGCCACCCTGGTGCGCATCTATGCG CGCCGAAGCAACCCAGTGCACTCGAGGACGGCGTGGCAACAAGCACGGCA GATGATGTAGCACAATACAGCAGCAGTTTCAACCTTAGAGTGTGCCCAAG AAGAGTTTGTGCGCAGGGTAAGACAAGCCGGGAACGGGGCTGGTGAAATC CGGCCGTCGCCGCCGCCGCCGATGGCAGAAGGGTACAGCGCGGACGCTGC GGTGTTTGCGTTCGGGCGCAGGAGTAGCAGTGATTCGCATGTATGCGAGC GATTGCACATCGAGCAGCCGCATGACGAGCGTGTGGGCGATTTGCAGTTC CAGAAGGCACATGTGTTTCACGGCAACCCTCCATCTCATAGCACAACAGG GGGCAGTCTCATTCTACTCTGCTGGGTAGCCGTCCGTGTAAACATGAACC CATCGGTCTGGTGCTTCGGCAGCCGTGCGCGTAATTCGTTGACGGCATTT GTTCGCAAGCACGCACACGCGCTCCCATTAAGGTGAAAGCGCTTCTTGTT CATTGAGCCGGCCTTTCCGTTGGCCCCCTTCTCACTCTCTCGCCGTCGCG CTTCCTCCCTTCCTCATCACGTAAATGACCCAACAGTACGAGGACTTCTT CGACCTCCGGCTAGCGGAGGCGGAGACCATCTTCCCGGAGGGCCTCGCCG GCGGCAGGCAGGGCGCCCTGGAGCGGGCGATGGCCGGCGGCACGTCCACG GCGCTCCTCCGCCGCGAGGCTGCGGACGCGCTGATCCACTCCCTCGACGC CTTCGCACCAGAACACGGGGGGGCGGTGCCGCCGTTCGGCATCGAAGGCA CCTCCAGCGAGAACTGGCGCAAGGCTTGCGAGGCGAGGCAGTACGGCAGC CAGCAGGACGGCGGTGGGTCTAAAGCAGGCGCGGCAACGGCGGCGGCGGC ATCGCCAGACGATGAAGATCGGGACGACGGCGGCGATGATGATGACATCA TCGGGGATGTGAAGGCAGCGGCCGCGGAGGGGGCGGCGGCGGCGGCGGCG GCGGCCGAAGCAGTTAAGGCGGCGGCCACGGCCGCGGCGGCGGCGGCTGC GGGCGGGGAAGGGCCGGAGCAGGAGGAGGGGAGGGGAAGAGAGGACAAGA AGGTCCTCGGGAGCGGGCCGGTATGGGAGGAGATGAAGGCTTTGGCGGAG TCGAAACGAAAACCGCTCAAGGGCGTTCGACGCGTGGTGATCCAGCCTGG TCAGGTGCGTCCGTGGGGTTGTTGATGTCGCCGGCAGCATGTTTTGTTCG TAGCAGTCATCGCTAAATCGGAGCGCGCGCGTGAAAGTTTTGTCAACATT GCCGCTTATCAGTTGCCAGCGCGCGTCCCAGCCACGGCCTCGACACCCCC GCGCGTGGTCGCTGACGTGGCGTCTACTGCAGCTGCACGAAGGAAGCAAA CATGTGTACGTCGCCCCCCGCCAGTCACCACGACACCGCTGACCTTTCCG CGTATATGCGTGCGGCTGCTGTCTGATAATACTGTAGCGTTCGTACCTCC TGACAGGGCGGCGGGGCTCCGGCAAGAGCTGCGTCCTCAATCATGCCGTC CTCCACGCCAGGTAAGGTTTTGTTTGGAGTATGCGCACTCACTATTGTCG CGCCACATGGTGCTTGTTACCGCGAGCTGACTGTGACGTACCGCAGCTGC GAGTGTAGGTACAGAAATGTGCGAAAGACAGAGCGTGCTTGTATCTGGAT GGTCGCAGGATTGCGCTCTAAGCACTCGAGATTTTGTGAAGGGCAAGCGT TTATGCTAGAGGCGCATATGCCACTCTCTCTCTCTTCTCTCTCGCTGTTT TCGTCCCTTCCTCGTGCTCGCGCTCCTGGCACACGGGTGGGTTAGTTGGC CATGCAGATCTGCGAGCTACGTACCTACAACATCCGAGATGTAGTCCTAT GGCCATCGTCTCCAACGAACCGCAAAACCCGCACACGAGAATCGCGTTAG TCTCGCACACAAAGAATTGACTCATGCTGGCTACCTTGGGGTCGACGGAA ACGCTCACTGATTGTGCCTTCTCTCGTGGATTAGCCAAGTCGTGGAAGAA GCCCCTTTGATGGCAGAGTATTGTCCCGCTCTACACAAGTACACCTGCTA TTTTTGGGATAACGAGGGCCCCGTGGTGGCCTGTGCTTGTCGGCACAGGT CGACAGGATGGATCGTTCTCTTCGTGCCGGACGGGAGGAACCTGGTCCAG AAGGGGATCTACTGCCAGCCGTCCCCTGTCCTGGAAGGGTTGTACGACCT TCCAGTTCAGGCGAGTTGGTGCTGCTCTTTTGCCTGTTGTACCTAACCGT GTTGGGAATTATTTTGCCGGCCGGCCTTCAGCTGTCGGGGTGTTTTGAAG GTAGCCCATGTTGTGTTTTATGGAGCCCCGTCCTCTGGTCGTGAAAAATG TGTTTGCCAAGGGTGCGGCAAGCTGTCTAGGAGATGTGGCACACAGTGTC GCGTTTTTTTAGTCTCAGCCCTATCCGGATCTTGGCGAGAGGTCGAAAGC GTGGGTGAACGCATCGAAAAGTGGTCGTTCAGTCTCTGATTATTCTTTTT GGCGTTCGGTTGACGTTGGAGAGACTCTTTGGCAATGTTGATTTTCGGGC GTCATCGCTTATTTTTGAGTCCATCGGCACACGCCCCATTTGTTTTTGCT AACCCTAACACTAACCCTAAACCTAGTTGTCGAAGGTTTGTCGTGCACAC CCCACTGCTCACCGTTTCAACCTCGCGTACCCCATTCCAACCAACGACAG CACCTGCCCATCCCACTCTCCGTTCCCCCCCGCCTGTCTTGCAGTCTATG AAGAGACTCAAGACTCTTCGGGAAGCTCACGGCGACCAGCTCAAGAACAT CAGCATCAAGGACCCCGAGGTACCGTTTCGTGCGTCAGTATTTCAGTGCT GATCGTCGTCCCCGTCTTCCCCTAGTGTAGAGGACGTGGGGAGACCCGCC GCCAACTCGCCCTTGCCGCTGTCCCGCGCGGGTCAGTTGGTGATGGCCTT TTGTCCCCGGTCCCGAGCCCGACATTTTCCCCTTTTCGTCTGTTTCTCGT TCCCCCGTCGTTCATGCAGAGGAGTTCCAACACGCTTGAGGGCGAAGGTC TCTCTACATCTTCGCCCCGCTGTGCAGAGGAAATCGATAGCGATCCCGCT ACGACATGTTTCTCGTTGTCTTGTTGAGGTTCCCTGTTTCAAATAGGGGT TTCCTTTGTCAGAGTCCACATCCCCCGAGAGCCTGTCCTCAGTTTTTTTT CGTGCCTCTCATACTGTGTGTGCAGGTGCTCGGCCGGCATGAGGGCGCCA AGACGCTGCTGGACGTGATGGACATGGGTCTGGCGGACCAAGTAAGAGCC ATGTGGAGAACACGAGGGGGAGGGGAATCCTCATGTGTTGGTTTCAACAG ACGGGACCAGCGCGCGTGGCGTGTCGTGGTTGGTTGCGACCACGCGAATG TGTTTTCTCTCGTGGCCGTAAGACCCCGTTGGATCCCCGGGTGTGCGCAC GGAGAGGTTTGTTCACGTGGCGCTCCCTGCTCCACTACGGTCGTTTTGTT TTTTTGGGGGGTTCTGTCTCGTAGTCTTGTGGTTTGGCGTTTTGTGTATG CGATGTCGGTGTGATGCTGAGGCCTGCTTCCTCCCAGTGCGCTCTTTAAT GCTTACCGCCTCGTTTTTTTGCATCTCGTCGACGAGACTGCTGTGCTCAG GGTTTCGTCTCTTGCGCGTGACCGCTGTGTGGATTCAAGTTGCGTGTTTT AGGAGCCTGCCGCCATTCGGCCCGCCACATCATCGAGTCGTGCATTTTTG TGTTTCGACACAGGAACACGCGGGGACGGCTCACTACGACGTGATGAGGG AGTTGCTGGCGACCACGGAGGCGAAGGTGATGCTGGCCATCGACGAGTAC AACGAGCTCTTCCAGATGTCCCACTGGTACTACGGAGACAGCAAGGCGAG TGCTGCAGTATCGCGGGTATCGGGAGGGGGGCGGACTTGGGTTCGCCTGT CGCACGAAGACTGATGAAAGCGTGTTGGCACTGCTTCTTAGCGCGTGTCA AGTGCCCACCATCCACGCCATTTTGGTCTTGCGGCGTGGCTCGGCGTGCA CCCGCTGTTGGCGAGCATTTGCACTGGCAAGAATGAGATCTCTCGGTATT TGCTGCGTTAAGGTGTTGAGGACTGCCAAATGTGGAAGTACCTTGACCTT CCCAGGGGTCGGTTTTCAAATCATCCCCCCCTCCTCCCTACCCCTCCCTC TAATAAAACCAACGAACAGCTGGAAGCGCCGCACCTCACGGCAACCCTGC CGCTCCTGCCGCCTTTGGTCTCGACCGGCACTGGCCTGGCCTTCGCGGAC GACTCGGTGGCGGCCCTTGCTAACCCGGAGGTGGTCGCCGAGACAAAAAG AACTCCTGCAGAGGCGGGGGGGGGGGCCTGGATGAGCCCGGAGACCGGGG CGGCTTGCCTGCCGCCACCGCCGGCGAACGGCATCGTGGTTTGCGCCGTG TCCGGGAGGTACCCTCCGGTGAAGAGGCTGAGGAAGAACAAGAAGTGGGT CCCGTTCGAGGCCACCGCGGGCCGGCTGGCGCAAGCCGTATCGGTAAGGG TTTGTTGCAGTTGA
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Coding sequence (CDS) from alignment at Scaffold_548:229668..234881+

>EsuBft712_7a-0001 ID=EsuBft712_7a-0001|Name=EsuBft712_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1788bp|location=Sequence derived from alignment at Scaffold_548:229668..234881+ (Ectocarpus subulatus male Bft15b)
ATGGCGACTAGGGTTGGGTTGATTCGGGCCCGGGGCCATTCATGTCGGGC
TCAGCTCGTGCATGGCCCGCTGCAGAGCTCGATCAGCGGTGTGCGGTTGC
TGGCCCGCCTCTCCTCCTCTTCGCGCAACACTGCTGTAAAGGGCAGCCCC
AGCGGCAGAAGCAGCAGTGCTCCCTTAGCGTTTCGCCCTCCCGATCGTAG
ACACCAGTATCCCGCGTCGTCGATTTTTCTGGGGAGAAGCGACAGCGGCA
GTGGCGGCAAGGCTCTGTTCTCGTCGACTACAGCAACCAGGCCTGCTCAC
GAGGAAGGAGCTGCGCAGGACTCGGACCCGGGCCGCAGCAGCAGTAGCAG
CAACAACAACAAACCGGGGCGAAAGACGTTTGATGGGAAAGACAACGACG
ACAGGCTCGCTAGGCTGGACGATGGGGATAAGTACGAGGACTTCTTCGAC
CTCCGGCTAGCGGAGGCGGAGACCATCTTCCCGGAGGGCCTCGCCGGCGG
CAGGCAGGGCGCCCTGGAGCGGGCGATGGCCGGCGGCACGTCCACGGCGC
TCCTCCGCCGCGAGGCTGCGGACGCGCTGATCCACTCCCTCGACGCCTTC
GCACCAGAACACGGGGGGGCGGTGCCGCCGTTCGGCATCGAAGGCACCTC
CAGCGAGAACTGGCGCAAGGCTTGCGAGGCGAGGCAGTACGGCAGCCAGC
AGGACGGCGGTGGGTCTAAAGCAGGCGCGGCAACGGCGGCGGCGGCATCG
CCAGACGATGAAGATCGGGACGACGGCGGCGATGATGATGACATCATCGG
GGATGTGAAGGCAGCGGCCGCGGAGGGGGCGGCGGCGGCGGCGGCGGCGG
CCGAAGCAGTTAAGGCGGCGGCCACGGCCGCGGCGGCGGCGGCTGCGGGC
GGGGAAGGGCCGGAGCAGGAGGAGGGGAGGGGAAGAGAGGACAAGAAGGT
CCTCGGGAGCGGGCCGGTATGGGAGGAGATGAAGGCTTTGGCGGAGTCGA
AACGAAAACCGCTCAAGGGCGTTCGACGCGTGGTGATCCAGCCTGGTCAG
GGCGGCGGGGCTCCGGCAAGAGCTGCGTCCTCAATCATGCCGTCCTCCAC
GCCAGCACCTGCCCATCCCACTCTCCGTTCCCCCCCGCCTGTCTTGCAGT
CTATGAAGAGACTCAAGACTCTTCGGGAAGCTCACGGCGACCAGCTCAAG
AACATCAGCATCAAGGACCCCGAGGTGCTCGGCCGGCATGAGGGCGCCAA
GACGCTGCTGGACGTGATGGACATGGGTCTGGCGGACCAAGAACACGCGG
GGACGGCTCACTACGACGTGATGAGGGAGTTGCTGGCGACCACGGAGGCG
AAGGTGATGCTGGCCATCGACGAGTACAACGAGCTCTTCCAGATGTCCCA
CTGGTACTACGGAGACAGCAAGGCGAGTGCTGCAGTATCGCGGCTGGAAG
CGCCGCACCTCACGGCAACCCTGCCGCTCCTGCCGCCTTTGGTCTCGACC
GGCACTGGCCTGGCCTTCGCGGACGACTCGGTGGCGGCCCTTGCTAACCC
GGAGGTGGTCGCCGAGACAAAAAGAACTCCTGCAGAGGCGGGGGGGGGGG
CCTGGATGAGCCCGGAGACCGGGGCGGCTTGCCTGCCGCCACCGCCGGCG
AACGGCATCGTGGTTTGCGCCGTGTCCGGGAGGTACCCTCCGGTGAAGAG
GCTGAGGAAGAACAAGAAGTGGGTCCCGTTCGAGGCCACCGCGGGCCGGC
TGGCGCAAGCCGTATCGGTAAGGGTTTGTTGCAGTTGA
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