Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FN97 |
| ProteomeId | EsuBft986_18 |
| Protein domains | TMhelix |
| Protein domains | IPR016137 |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | TRANSMEMBRANE |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 8 |
| Max annot lvl | 2880.D7FN97|- |
| Length | 164 |
| Hectar predicted targeting category | signal anchor |
| Evalue | 7.49e-10 |
| EggNOG OGs | 2D0MX@1|root,2SERP@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Regulator of G protein signaling domain |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0038032 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft986_18a-0001 ID=EsuBft986_18a-0001|Name=EsuBft986_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1641bp|location=Sequence derived from alignment at Scaffold_548:23275..29140- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAATCACTACAGCAGTAGACCGGGATTCCAATTTGTCACGTACCGCAT
GGCCAGGTCTGCGCACCTGGTCACGCTCCAAGGTGTGAGCTTGCTTTTTT
CGATGCTCGTCACCGTGAACGATGCCACCACCATCGTGTGGGACAGCGGG
CTCGACTGGTTCTGGATATCTCTGCTGCTCTTCTTCGTCTCGCCTGCGTT
GTTCGGGAGCTACATCTGCCGCGCGCTCCGCCTGGCAGTGGTTTTCAATC
CGAGGGCGAAGCGTGCGCTGCCGTGGCTCATCCCGGAGCGCAACTACCTG
GCGGTGCTGCTGCTCGCAAGCATAGGAATACTGGCAATCCCCATCTACCA
AGAGTACACCTTGGAGGTCTGGGACGCCATTCCGAAACAGACCAGCATCC
TGAAGACGCAGGCCCGCGTGTTAGCGGTGATGCTGGTTTGCATTTACCCT
TTCATCAGGAACGTTGACGACCTCTTCAATATCAGCAAGGAGCTCATTAC
TGTCACTGTGACTATCGCGGTCGTCACATGTGAGGCCCACAGCTTCGTCC
ACCGTAGCACCCACGTAGAGTCTTGTTTACAGCAACACGTCCCACCTACC
ACCAAACGATTTCCGTACCCGATGTCCCCGTCCAACCTGTCAACGCGCAG
TGTCGTGGCTCCGCTGCGCCGCCTAGCGTTGGACCCATTGGCGGCAACCA
AGCGCAACTACGCCGATCGGGTGCTGCTCAGCCGCACGGAATCCCACAGC
ACGAGATCAGCTTCCGGTATTTCGCCAGAAAGAGCCGGCGGTTCGTCAAG
GATAGTGGACGACAGCGAGGACGAAGTCGCGTTCGAGGACGAAGAGCTTG
GAGGAGTTCCGGGCTTCGACACCACAGCAGCAGCAGGAGTAGGAGGTGGT
AGCACCGGCAAGGTCGCCACCTCGGCCGTCGTTGGTAGCGGTGTGATTAC
CACATCCTCCGCCGACGCCAACGGTGCCGTCGCTCCCTGTCCGTGGAAAG
GCCGGGAATTGACTATTGCGAATGGATCGACGTCCGTACCCAAGGGCAGC
AGCAGCACTGGCAAGAGGCGTGATGCCGTGCAGCGGGGGCAAAGGGGGAG
GGGTGGCGGCCGTGGCCGCGGTAGTGGTGGTGGCCGAGGCCGTTCGGATA
GAGAGGAAATGGAGGTGTGGGACTTCGAGCGCCTTGGAAGGACGCCACTC
CTGGCGGCTGCGTTCGAGGACTATTCCAAGAGGGCGCTTTGCCACGAGTC
GGTGCTCTTTCTGAGCGAGGTTTCGCGGTACCAGAACGACGACTACGCTA
CGCCGACAAACGCTGCTGCCGGGACATGTCCAACTCAGTTCGGCACGTTC
TGCTTCATCACGGACACCTTCATCAAGGCCGGCGCGCCGGAGGAAGTAAA
CATTAGGAAGCTGATACTCGAGCTATACCAGAAGGGCGAAGAGTCCTTCG
AAGAGGTCAACGAGGAGGAGAGGAGGATGGTATTTAAGCGATCGTACCTT
GCGGTGAAGAGCATGCTGGAAGCCAACCTCCTCCGCCGCTTCCTCAACAC
GGACCAATTCAAGAGCGTCAGGAAACAGAGGGAGAACGTCCAGGCCATGA
TGGACTCCCCGCCCCTGCCGGCGGGAGTCGTAGCTGCCTAG back to topprotein sequence of EsuBft986_18a-0001 >EsuBft986_18 ID=EsuBft986_18|Name=EsuBft986_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=546bp
MNHYSSRPGFQFVTYRMARSAHLVTLQGVSLLFSMLVTVNDATTIVWDSG
LDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYL
AVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYP
FIRNVDDLFNISKELITVTVTIAVVTCEAHSFVHRSTHVESCLQQHVPPT
TKRFPYPMSPSNLSTRSVVAPLRRLALDPLAATKRNYADRVLLSRTESHS
TRSASGISPERAGGSSRIVDDSEDEVAFEDEELGGVPGFDTTAAAGVGGG
STGKVATSAVVGSGVITTSSADANGAVAPCPWKGRELTIANGSTSVPKGS
SSTGKRRDAVQRGQRGRGGGRGRGSGGGRGRSDREEMEVWDFERLGRTPL
LAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTF
CFITDTFIKAGAPEEVNIRKLILELYQKGEESFEEVNEEERRMVFKRSYL
AVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVVAA back to topmRNA from alignment at Scaffold_548:23275..29140- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft986_18a-0001 ID=EsuBft986_18a-0001|Name=EsuBft986_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5866bp|location=Sequence derived from alignment at Scaffold_548:23275..29140- (Ectocarpus subulatus male Bft15b)
ATGAATCACTACAGCAGTAGACCGGGATTCCAATTTGTCACGTACCGCAT
GGCCAGGTCTGCGCACCTGGTCACGCTCCAAGGTGTGAGCTTGCTTTTTT
CGATGCTCGTCACCGTGAACGATGCCACCACCATCGTGTGGGACAGCGGG
CTCGACTGGTTCTGGATATCTCTGCTGCTCTTCTTCGTCTCGCCTGCGTT
GTTCGGGAGCTACATCTGCCGCGCGCTCCGCCTGGCAGTGGTTTTCAATC
CGAGGGCGAAGCGTGCGCTGCCGTGGCTCATCCCGGTAAAAAGTCTCGAT
TTTTTTGTGGTGACATTGGGCCGAGTGTTTTGTACGTCTCTTCTGCAAGG
CATGTTTTCGGACGAAGGTTTGTCTGGATCCGCGATTATATTTTCCTCTT
GAAATGAGACTTAATGCGTTGCTATTGTTCAACTCTGCACGCGTTCATCC
GCGTCGTCCAACCTTCGGTCGAATCACTTGGTTATACAGTGGCGTCGCCA
AATGCCACCCGCAACCGTGATAGCGTCCCTCTCTCGCCGCCACACGATCT
CGGACCATCGTTTTAACCGCTCCTCCTCCCCACTACCCACCGTCTCTCAT
TTTCAATTGTCTCGCGTTGGCTCTGCGTCGGTGTGTGCCTCTTGTGCCCC
ATTTATCCGACACTTTCGGACAGCAGGAGCGCAACTACCTGGCGGTGCTG
CTGCTCGCAAGCATAGGAATACTGGCAATCCCCATCTACCAAGAGTACAC
CTTGGAGGTCTGGTAAGATCGAGTACCTTGCAAACGAGAACACACCGTGC
ATCAAATCGCTGCATGCGACGTTTGTTGCACACAACAAATGAAGACTCCC
CCCATACCCCGTCCCCCTCGGTGTTTGCCATCGGGGTTGGGTTTTCGTCG
CTTGGCAACGACGTTGTAAAACAAGCCAATTCACTTCGTGAACTCGGCAA
CCAGGTTACCGTTTTTGTTTTTACCTCTTTTTTTTTTGGGCGGTAACCAT
AATGGTGGTCGAGTAGATCATGTTGTGCGGGGTGGAGAACCCTCGCTCCG
CGCAAGGGGGATGATCGCACCACGTTGTGTTAAAATGGTCAAGCACCCTC
GAGGCAGTTACACAGTGCTTACAACTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCATACCATAAA
AGCTGCTCTTGAGGTTCATGATGTGGATGTACGATGCAAAGGGATGATTT
GTCGTCTAAATGGGAACTCCGAAAGCCTCTGCAATGTTGGTGGTGTTGCG
TTCTACCCTCTGCTCTCTTTGGTCATTCGTGTGTGATGGCGTTAGCGAAG
TGCCTCATCGTTCGTGTCTTGACGATTGGACTATCCGCCGTTGTTCCGCT
GTGCGTCTCGCCCAGGGACGCCATTCCGAAACAGACCAGCATCCTGAAGA
CGCAGGCCCGCGTGTTAGCGGTGATGCTGGTTTGCATTTACCCTTTCATC
AGGAACGTTGACGACCTCTTCAATATCAGCAAGGAGCTCATTACTGTCAC
TGTGACTATCGCGGTCGTCACATGTGAGGCCCACAGCTTCGTCCACCGTA
GCACCCACGTAGAGTCTTGTTTACAGTACGTGTGGACCTATTCTGTAGTC
ACGCCTGGTTGGTTAATTGCTACGATTCCCTGTCCTCGTTTTCGATAACC
TCATTTTCAAGACCTGACTTGGAAAACACTGCGATTCACAGGGGCCGTTG
GAAGTGCTTCGACGTGGGCATGCTGACAAGATTAGACGCACGTAGACTAG
GCAGCTACTCTGAACCCGATGTACAGCAGTGTATCTAATCCCTTGTTGGC
CTAGTACCTTTATACTTATTGCTTTGTCCTGCCTCGCAACGGCCGAGATT
GTGGCGGTGATGTTTTTCGTCGCTATACCTCATGACCACCGTTGCTGATT
CCATGCGTTGTCTTTGTTCTCGACGCCTGCGTGAACCACACCAGTCGTGC
AAGAGGTCGTCGACGAATGTGGGGGGGACTTTGAACAGAGATGGCTCACA
AGCAACCTTTCTCTAGTGTTCGTGGCTGTCCTATTCTGCATCAGGTGGGT
GCTCTCTCTCTTGTGTTTCTGCTCGCCATCCGTCTATGGGTGAGATTTGG
TCTTGAATCGATCAGATAGATGCTTCAAGATATTGATCGTTTGGACGGAA
TACTCCTTGGCAGGCTGACTAAGGCCCCTGTGTCAGAGATTGGTCCAGGG
ATTTGCGGGTTGATCATTTTGGTTGGTCATTGCAGACTAAACCATTTTGT
CGGAACAAACATACGGGCTTGGGGTCGAGAAACATGAAAAGCTGATGGCA
ATCGGTTTCGGTCGCAAATGGAAGGGGGTCAGCTCGACACACGTTATAAC
GGGAACGTTGTCGTATCGTCACATCTTGCTCTTCGACTTCTGGGTGGACG
TTAGACTAGACGAATTGTACGTCGAATCTCGCAGGCAACACGTCCCACCT
ACCACCAAACGATTTCCGTACCCGATGTCCCCGTCCAACCTGTCAACGCG
CAGTGTCGTGGCTCCGCTGCGCCGCCTAGCGTTGGACCCATTGGCGGCAA
CCAAGCGCAACTACGCCGATCGGGTGCTGCTCAGCCGCACGGAATCCCAC
AGGTGAGCGACCGAGCACGGGCCACAAGTAGCAAGAGGAGAAGCATGCGC
GGACGCATGCCCAGTGTGTGGCAGAGCGTCGCGGTGGCGTCATCGTAGGG
GTCATAGAGCGGTGACGTGCATCGGTTTAAGTAGGCATTGCCGTAAGTGT
GCGAGAGAATGCGCGCGGGTGTCATCGTTTTTCGTCGCATGATTTCTCCA
CAACCAGGAGGGTACAGGAGGTAACACTGCCGACAAGGGGGGGTGGTTTG
GGAAACATCACGTCGAGGGCTTTCCTAGGAGGTGTCGGTTGGTGTTCGCA
CCCTGCTGGTTGTGGAGCAATCAGGCGTTCAAGAACGCCAACACCCCCGT
GCGTTCTCTCGCATCCTAACAGTACTCGCCTTCCACAGAGGCATCTATAG
CCTGACGGATGCGGAACGGGTCGGGTCTTGATCATCCCCGTTTTTTACTT
TGACAACATAACAAGCTTGTACACCAAGATGTAGACCAATACGGGAGTTT
TGAAGCCATCTCTTCATCTGCGTAGGCACGGTTCTCCGGCTCTAGAGAAA
GGCATGGGGCAATACCAATATACAGTCGAGGGACCTCTATAGTGCAGGGG
TCTGTCCAGAGATTTTTCCTGCAGTATACCGGGCACCTGCACTGTTTTGG
ATCAAGGAACTTATGGGTTCTAGTGTACCAGCTTAAGTCAGCAGAATGCA
CCGGCACTATTAAACCTGCCCTTCAGAGGTCCCTGGATTGTATTTCAAGG
CAAGGCCACTCCCCCCCGCCCACCCCCTATGCACCAGCACGAGATCAGCT
TCCGGTATTTCGCCAGAAAGAGCCGGCGGTTCGTCAAGGATAGTGGACGA
CAGCGAGGACGAAGTCGCGTTCGAGGACGAAGAGCTTGGAGGAGTTCCGG
GCTTCGACACCACAGCAGCAGCAGGAGTAGGAGGTGGTAGCACCGGCAAG
GTCGCCACCTCGGCCGTCGTTGGTAGCGGTGTGATTACCACATCCTCCGC
CGACGCCAACGGTGCCGTCGCTCCCTGTCCGTGGAAAGGCCGGGAATTGA
CTATTGCGAATGGATCGACGTCCGTACCCAAGGGCAGCAGCAGCACTGGC
AAGAGGCGTGATGCCGTGCAGCGGGGGCAAAGGGGGAGGGGTGGCGGCCG
TGGCCGCGGTAGTGGTGGTGGCCGAGGCCGTTCGGATAGAGAGGAAATGG
AGGTGTGGGACTTCGAGCGCCTTGGAAGGACGCCACTCCTGGCGGCTGCG
TTCGAGGACTATTCCAAGAGGGCGCTTTGCCACGAGTCGGTGCTCTTTCT
GAGCGAGGTTTCGCGGTGAGTAGAAGGCCCGAGGGGGGGGAAAGGGAGTT
TAGATGGAGCAGTCACCCCCCTTACTAAGACGGATCGGGTATGATACGGT
GGCATGCATGGTATCCTGGTGTCTTGCCCATTTTGATGTTTCCCTCAGTT
TGTTTTCCATTGGGTGCCTTGGTGCGCCGCAGCCAGTCAGGGAGTCGGTT
TAACTTCCAAACAAGTCTAGATGGAGGAAAAATTGCACGAACAGTCTTCT
TTCGCCATTCGTCGCCAACAATCCTCTCTTTCTCTCTTTCTCGCCTGACA
GGTACCAGAACGACGACTACGCTACGCCGACAAACGCTGCTGCCGGGACA
TGTCCAACTCAGTTCGGCACGTTCTGCTTCATCACGGACACCTTCATCAA
GGCCGGCGCGCCGGAGGAAGTAAACATTAGGTGAGCTGCGACAGGCAACA
ACAACGAGCGTGACTCGAAAGCGGTAGTCCATGGTCACGTTTCCTTTCTC
GCTCGAACACCGTCAAGCCTTCATCGTGATGCCGGCGTATCGGCGGCGAT
TGACCTCAAGCCATCTGGGACACGGCGAGAGTTGTATTGCAGCCACTCAT
CCGAAAGGGGGGTGGGTTGGTCCAGTAATGTACTCCGTGTCGTTTTAGTG
CTCTGTGATGGGTAAGATACCTTGTTGCACTGGGGGCAGATTGGTCCAGT
AAAGTACTCCATGTGGTGTAGTGCTCTGTGATGGGTGAGATGCCTGGTTG
CGTGCTGCTGACCATTCTGCGTCCTGCTGATCGACAAAGCCGCGTTTGTG
ATGCGTGTTTCGTTTTGTTTTTTCTTGTGATTCAGCGACAAGGACAGGAA
GCTGATACTCGAGCTATACCAGAAGGGCGAAGAGTCCTTCGAAGAGGTCA
ACGAGGAGGAGAGGAGGTGAGCGACGAGAAAGACGATTTGAAAACACCGA
CGGACGGCACGTTCAGCCAGTATTCGTTTCTGGCGGTTGTGCATACCCTG
TAGTAGTGTTTCTTTTTCTTGGTAGTGACAGTTAGTACTTCATTCAATGT
TGCTCTCTTCTGAGGTGATCTCACTTTCGAGGGCATGTAGAGGAGTACGA
TTGGAGCACGAAACCCCCTTACATTTCCTGCAATGTGTCTTGTTCGTCCG
CACTGCGAGCCACTCGCACGCATCTGGACGGCGCTTTTGCAGGAAAGGGT
ACCGCATGTGTTAGTGCGGCCCAAACCTCCGCCCACGCGCATCTAGTTAT
GGCGTTTTTGTCTTGACAGGGATGGGCGCAATGCCTATGCCCAGGAAGAT
AGAAAAAAGCAGTGATTGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTTTCCCCCCCCCCCCCCCCCGTCAAACCACCACAATCTCGGCTTACAG
GATGGTATTTAAGCGATCGTACCTTGCGGTGAAGAGCATGCTGGAAGCCA
ACCTCCTCCGCCGCTTCCTCAACACGGACCAATTCAAGAGCGTCAGGAAA
CAGAGGGAGAACGTCCAGGCCATGATGGACTCCCCGCCCCTGCCGGCGGG
AGTCGTAGCTGCCTAG back to topCoding sequence (CDS) from alignment at Scaffold_548:23275..29140- >EsuBft986_18a-0001 ID=EsuBft986_18a-0001|Name=EsuBft986_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1641bp|location=Sequence derived from alignment at Scaffold_548:23275..29140- (Ectocarpus subulatus male Bft15b)
ATGAATCACTACAGCAGTAGACCGGGATTCCAATTTGTCACGTACCGCAT
GGCCAGGTCTGCGCACCTGGTCACGCTCCAAGGTGTGAGCTTGCTTTTTT
CGATGCTCGTCACCGTGAACGATGCCACCACCATCGTGTGGGACAGCGGG
CTCGACTGGTTCTGGATATCTCTGCTGCTCTTCTTCGTCTCGCCTGCGTT
GTTCGGGAGCTACATCTGCCGCGCGCTCCGCCTGGCAGTGGTTTTCAATC
CGAGGGCGAAGCGTGCGCTGCCGTGGCTCATCCCGGAGCGCAACTACCTG
GCGGTGCTGCTGCTCGCAAGCATAGGAATACTGGCAATCCCCATCTACCA
AGAGTACACCTTGGAGGTCTGGGACGCCATTCCGAAACAGACCAGCATCC
TGAAGACGCAGGCCCGCGTGTTAGCGGTGATGCTGGTTTGCATTTACCCT
TTCATCAGGAACGTTGACGACCTCTTCAATATCAGCAAGGAGCTCATTAC
TGTCACTGTGACTATCGCGGTCGTCACATGTGAGGCCCACAGCTTCGTCC
ACCGTAGCACCCACGTAGAGTCTTGTTTACAGCAACACGTCCCACCTACC
ACCAAACGATTTCCGTACCCGATGTCCCCGTCCAACCTGTCAACGCGCAG
TGTCGTGGCTCCGCTGCGCCGCCTAGCGTTGGACCCATTGGCGGCAACCA
AGCGCAACTACGCCGATCGGGTGCTGCTCAGCCGCACGGAATCCCACAGC
ACGAGATCAGCTTCCGGTATTTCGCCAGAAAGAGCCGGCGGTTCGTCAAG
GATAGTGGACGACAGCGAGGACGAAGTCGCGTTCGAGGACGAAGAGCTTG
GAGGAGTTCCGGGCTTCGACACCACAGCAGCAGCAGGAGTAGGAGGTGGT
AGCACCGGCAAGGTCGCCACCTCGGCCGTCGTTGGTAGCGGTGTGATTAC
CACATCCTCCGCCGACGCCAACGGTGCCGTCGCTCCCTGTCCGTGGAAAG
GCCGGGAATTGACTATTGCGAATGGATCGACGTCCGTACCCAAGGGCAGC
AGCAGCACTGGCAAGAGGCGTGATGCCGTGCAGCGGGGGCAAAGGGGGAG
GGGTGGCGGCCGTGGCCGCGGTAGTGGTGGTGGCCGAGGCCGTTCGGATA
GAGAGGAAATGGAGGTGTGGGACTTCGAGCGCCTTGGAAGGACGCCACTC
CTGGCGGCTGCGTTCGAGGACTATTCCAAGAGGGCGCTTTGCCACGAGTC
GGTGCTCTTTCTGAGCGAGGTTTCGCGGTACCAGAACGACGACTACGCTA
CGCCGACAAACGCTGCTGCCGGGACATGTCCAACTCAGTTCGGCACGTTC
TGCTTCATCACGGACACCTTCATCAAGGCCGGCGCGCCGGAGGAAGTAAA
CATTAGGAAGCTGATACTCGAGCTATACCAGAAGGGCGAAGAGTCCTTCG
AAGAGGTCAACGAGGAGGAGAGGAGGATGGTATTTAAGCGATCGTACCTT
GCGGTGAAGAGCATGCTGGAAGCCAACCTCCTCCGCCGCTTCCTCAACAC
GGACCAATTCAAGAGCGTCAGGAAACAGAGGGAGAACGTCCAGGCCATGA
TGGACTCCCCGCCCCTGCCGGCGGGAGTCGTAGCTGCCTAG back to top
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