EsuBft1476_8a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1476_8a-0001 ID=EsuBft1476_8a-0001|Name=EsuBft1476_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1727bp|location=Sequence derived from alignment at Scaffold_54:70623..76066- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
AGTCAACAGAGCTCACATCAAGAGAAAGAGAGAGAGAGAGAGAGAGACCA
TGAGGGCTTCTGTATTCACGGCTGCGGCTTCCGCGGCGGCGGTAGCCTTG
TGTTCCGGAGTGTCGGGGTTTGTCTTCGCACCGCCTCTGCCTGCAAAGCG
AGCTGGCGCACCGACGACGGGCAAAGCATCGGCGTGCGCATCCACGGCTC
CTCGCCTGAGATGGTCGTCGTCCTTGAAAATGGCTGCAGACGAATTCGAC
GGGGATGCGGTCCTGGCTTCGGCTCAGGAACGGATGGACAAATCGGTGGA
GAGCGTGCGGCTTAACCTCGAGACCCTCCGAACCGGGCGGGCAAACCCCA
AGATACTGGACCGCGTTGTGGTGGAGTGTTATGGGGCGGAGACGCCGCTC
AACCAGGTGGCCTCCGTGAAGACCACCAGCGCCACCGCGCTCTTGGTGGA
GTCATACGATCCGACTATCCTGGCCGACATCGCCGCCGCCATCCAAGAGG
CGGACTTGGGCCTTACTCCGAACAACGACGGCACCGTGATCCGGTTGAAC
ATGCCGCCCGTGACGGAGGACCGCAGAAAGGAACTCGCGAAGGAGGCCAA
GAGCCTTGGGGAAGAGGGTAAGGTTGCGATTCGTAACATCAGGCGGGAGG
CTGTGGACACGGTGAAGAAGGCCGAAAAGGCCAAGAACTTGGGCAAGGAC
CAGTCTAAGGATGTACAAGACGCGATCCAAAAGCTCACCGACAAGACTAC
GAAGACCATAGACGAGAAGGTTGCCGCCAAGGAGAAGGACATCCTCAAAG
TGTAAACGTATCCACATCTACGTTATGTACGAGCTCTACGAAAGCAAGTG
TAGAGACCGTCTGTCCCTAGATAGTCTACGATAGAGAAGTTGAGTACTTC
ATACTAGCGCGTACCGCCGCGCCATGGGCGATTTGTTGTGGTCTTCTTAT
TCATCTACAATTTGCCGCAGCTGGGCTCGAACCCACCCATTTCGGGGATG
CCCACGGTAAAAACAATGGTGGCTGACGAGGTCGGTGCGGCGTGGGCGAA
AATGTCTTGGTACGTTCGGGAATGGCAAGAAAATTTACTTTCTAAAAATA
GTGTTCCCGTGGGCGGACGACCACTCTTGAGTTCTACGAGGAGGATCCAA
GAAGGAACATCCAACCAAGCGAGGGACGGTTTCCCTCCCTACTGTTGCTG
AGCGGATGCATCGAAAGTGCAGGCTTTTTGCCCTGCGACGGGTAACATTC
ATTTGCGAAGTATTCGCGGGAGGTTGACAGCAGTTGCACGATCAATATGC
ACTAACACACACGCCACGTAGTATTTTTTTCCTTTCCACTGGCTTTGATT
TGCATGCGTGGTTTTATCGCTACCTGTAAACGGGTTCAGCATCCCCTTCC
TCGTCGTTATATAATGTGACCAATATGGATGCAAGCGGTTCGAGTAAGTG
TAGAGAGGAACACACGAACACACTCACCTTGCTGTTCACAACGGTGTTGA
TTGACATTTCTTCTTCTAACGGGTATTATTGCAATAAATTCATTGATTCC
AGCAACGTATTATCTCGTGTGCCAAGCAATGTAGATGGTAGACCCGTAGC
TAGCTGTAGAACTGTACTTACAGGTTCGGTTCGAAACCTCGTTTTTTGCT
GACAAATGACACAATCAGTTAACAGAGCTTCTCGGCCGGAATTTGTTCGT
TGTTCGTTTCACAGGCAGCAGGTACGG
back to top

protein sequence of EsuBft1476_8a-0001

>EsuBft1476_8 ID=EsuBft1476_8|Name=EsuBft1476_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=251bp
MRASVFTAAASAAAVALCSGVSGFVFAPPLPAKRAGAPTTGKASACASTA
PRLRWSSSLKMAADEFDGDAVLASAQERMDKSVESVRLNLETLRTGRANP
KILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQE
ADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKSLGEEGKVAIRNIRRE
AVDTVKKAEKAKNLGKDQSKDVQDAIQKLTDKTTKTIDEKVAAKEKDILK
V
back to top

mRNA from alignment at Scaffold_54:70623..76066-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1476_8a-0001 ID=EsuBft1476_8a-0001|Name=EsuBft1476_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5444bp|location=Sequence derived from alignment at Scaffold_54:70623..76066- (Ectocarpus subulatus male Bft15b)
AGTCAACAGAGCTCACATCAAGAGAAAGAGAGAGAGAGAGAGAGAGACCA TGAGGGCTTCTGTATTCACGGCTGCGGCTTCCGCGGCGGCGGTAGCCTTG TGTTCCGGAGTGTCGGGGTTTGTCTTCGCACCGCCTCTGCCTGCAAAGGT AAGCAGCGAAATTGAACATGACAGCAGTTGTAATCCGCATGCTGCTGCAC CTGTCCACGAAGGGTGCCCCACCAAAAGGAAGCCCTCCTGCTGTTCCCTC CTTACTGCTGTGCGCGGTTGGTTTGGTATGGGTAGCAAGGTAGTGTGGAG CTAGGAGGTCTTGGCGTTGTTGATGGTATGCGTCTTTTTGATCATGATGA TGCCATCGGAGTGAGGGCACTTGTTTAGCATACACATGCGTGCTGCGTTG GATGTATCGATCGTCGATCGTCGTTGACGACTCACCGCGGTTGATGTGTC ACACCGCCCTTGCGGGTCCACTGGGACGTTGTGCATCTTAGGCACACGTA GAAGCAGCAGAAGGTGTAGGCAGGTGGTGTTGAGACTCACAAACCTGCTC TGTTGTTGCGATTCTGTGCTGGCGGGCAACCACCATGAAGGACTGCGAGC ACTCGCGAGGGCTGGGCTCAGCACCCCGTGTTGAGCTGCCTACTTGTACA ACTAAGCAGGCCAGCGGCGGCGGAGGGGCCGAGAAGAGTGTACCACGCGC TCGGCACGAAGGTTCACCACCTCATGCAACCGCTCCCACGAATCTCGAAT GCTGAATGAAACAAAGCAGGACCAAACTTTGACATTTCCATTCACTCTTC CGGCCGTCTGCCTGAATCCTTAAACGTCAAACAGCGAGCTGGCGCACCGA CGACGGGCAAAGCATCGGCGTGCGCATCCACGGCTCCTCGCCTGAGATGG TCGTCGTCCTTGAAAATGGTGAGCAAGGCAACCCTGACCCTTGCTCCGAC TGCCCGGCTTGTTTTTGACGATAGTATTCGCAAACGATAGGGAGGTACGA TACTCCTAAGTAAACCTTACGCTGTACTGCTGCGCGTGTTTGACTAAGCA CCATGGTCAACGAGCGGCATCATGCTGTCCCTGCTACGCCCGGTAGGTTG CTCGGCACTTTTGTGATCACAAACCTTCGCATCATTTCCGCCTGAAGGAA CGCGCTCGCGACGCGGATAGTTTCACGCTGGCGGTACCCTATCCGCCCCA CGAGAAAGTTGGAAGTTTCCGTGGGAAACCTCGATTGTTGCGGTTATTTG GGGGACGTTCATGGGCGGACCCGATCGATCGCCTACGCCCACCGCTGCTA GAAGTACATTCCGAGTGTCGAGAAGGGGGTGTGCCGTTCGTATCTGCTAC GGCATTCACAGATGTCACAGAGGCCGCAACGACCGAACACGTGCGCACAA TGACGCTGTCGGTGTTCTTTCCCCTCTCGTTCTACCGATCGATCGGCTAC GCCCACCGCTGCTACAGCAGTGCATACATGACGTGTCGAATTTCGACAAG GGTGTGTGTTCGTAACTGCTGTGGCATTCACAGATGTCACACGGGCCGCA ACGACTGAACACGTGCACTACTGCTACAGCAGTGCATACGTTTCAAATTT CGAGAGGGTGTGTTCATAACTGCTGTGGCATTCACAGATGTCACTTGGGC CGCAACGACCGAACACTTGCGCACAATGGTGATGTCGGTGTTCTTTCCCC TCTGGTTCTAACCGGTCATTGCCTAGAAACAACAGGATCATGGACCATCC AATAAGAGTGGGAGCGATGACTTGGTTTGTTCCTTCTTTTCTTCTTTGCG CGTGCGGTTAACTGCTGTCCGCCTGTCTACAGGCTGCAGACGAATTCGAC GGGGATGCGGTCCTGGCTTCGGCTCAGGAACGGATGGACAAATCGGTGGA GAGCGTGCGGCTTAACCTCGAGACCCTCCGAACCGGGCGGGCAAAGTGAG TGATGCGCCGCGGCAATCAATACCTCAACCAACACAGCAGCTACGGTTCA GGAGCGAGCGACCAATAGAGACATTTTCGTTTTATCCAAGATGGAAGAAA CGGGACGATTGATCACGTTGCGGGATGATTTTTGTACAATGTACGTTTTG GACGCGTAAGGTATTCCCTTCATGATGGTGGCGATCAAATCGATTAGCAT GTGGAGCCTCAACAGCATAACCATTCGCCTGGCCGATTGCCTAGCCTGTA GCAAGAGTGATACGAATTGTCGTCCGTTGGGGCCGCAGTTCTCCCGATGT CATTGTAGACTTATCCATCAAATTTTCTGTGACAAGGTCCAAGGGTCGGC TGGGCGCTGTATTTAAGTGAAGACAAAAAAAAAATGGTCTTTGGTCCTTG CGCCGTTGGTTTCAATTGCTCATTCCTGGCGCCCTTGGCATCACTTGAGA TCTTGGCGCCCGTGGTTTCACCTTGCTCTCTTGTTGCCTTCCTCAGCCCC AAGATACTGGACCGCGTTGTGGTGGAGTGTTATGGGGCGGAGACGCCGCT CAACCAGGTGGCCTCCGTGAAGACCACCAGGTGATTATTTTTTTCTAATT TGGTAAATTGCTTGTTTTGTGAGAATTACTTGCTGCCTTGTGGGTAACAT TGTCTAGGAAGTAGCAGCCTCGTAACAGGAAAAGAAGCCAGGCGTGCGCT GGCCCAGCATCCACAATGATCGATGCAACACGTCACGGCGGGACAACGTC TGAAGGAGAGAGAATGCTCTACCGCCGACTCTCCTCGTTCGCCTGGAACG TGCTGATTGAGGTCTCGCTATTCCTTGTTTTGGGGTCACCATGTACATGT TGTTGTCCGCTACTCGTCGGCCGCATCGAGAAGCGGTAGGCTCTGGGAAC CGCACCGACCAAGAGAGACGTATCCTTCAATGACTGTTTTTTTACAGTTT ATCGCCATCCCCTCTCCCTGTCCGTCCCCTTTCTCTATCCCGCCTTGTCC TGGGTGCCGTTTTTGGTTGTTGGTTATTGTGGTGTGTTTCCCTCAGCGCC ACCGCGCTCTTGGTGGAGTCATACGATCCGACTATCCTGGCCGACATCGC CGCCGCCATCCAAGAGGCGGACTTGGGCCTTACTCCGAACAACGACGGCA CGTAAGGGAAAAGACGCATGGTGACAAGTATGTTCGTTCTTTTTGTTCGC TTGGACGCCGACTGTGTGCCCTACGAGTCTGCAGTCGGTGCGGTGTGTTG GTTCTTGGTTGCTGAAATGTTTTGATGATTTTTTTGTTCGCTCCGGACGA CGAGCGCACCCCAACACGCCTCTTCAATGGCCCCTTTGCGTGCTTTTGGT TCCGTTTGCCCCGTCGACCAGGGTCTAGTGGTCTCTCAGTAGTGCTAGGT GGTCTCTTAGTAATGCTAGGAGGACTCCTTTACTCTCCACGTCATAGTCC TCACAGCCTTAACTTCGCCCCCCGAAAGGAAGAGGCTGTGCCCCTCCATT TCGCTGATTGAATTTCCCATCGATTTTCATTTTTTCGAGGTATTTCTTCC GCCCCCCACACCGTCCTGGTGTTGTAGGGATGCGAGGTCCTTGAAATACC GACTACGGCATACGTTTACGTGACTACACCCCACCCCGTGTGTACCTCCC CGTGGCGCCGAAACAGCGTGATCCGGTTGAACATGCCGCCCGTGACGGAG GACCGCAGAAAGGAACTCGCGAAGGAGGCCAAGAGCCTTGGGGAAGAGGG TAAGGTAGGAAATCAGCAGTTACTGGTACTCTTGAACCTCTATCCCGCTT TATGCCATGCAAGAGTCTTGGAGGAGGGGGAAGGTAGGTCAGCATGTAAG TTGCCCGCTGTGATCTGTGCTGGTACTCTTGAAAATGTAATCCTCTTCTT CATGGCCATGGGGCTTGGATTTCGAGGGTTTTGTTGCCCGCATCACGTAG CACGTGTTCGCTTTATCTGTGTGGACGAGGCTCATCCGTACGCTAGCTTG GCTTTAATTGCACCCCCGGGGATTACGATCGCTATTGGAGCTTCCAATGT GGGAGGGTGAATGCTGCAGGTAGTCAAGACAGAGTTGGAAACGAGTTTTT GATTCCGCGTGGTTTCTGAGGTGTTCACGAGCGCGCTTCTTCGTTTGTTT TTTCGTTCACAGGTTGCGATTCGTAACATCAGGCGGGAGGCTGTGGACAC GGTGAAGAAGGCCGAAAAGGCCAAGAACTTGGGCAAGGACCAGGTAGCTT GACTACTGGTACCATGCTATTGGGAAGTTGGGGTTGACCTTCGGCAGTGT TTGGTGCATGGACGCTCGTTTTTGTTTTGCGTTTTTCTTCGTCGTCCGGC GGACTGAATGCATCCCCAAGACTAAAGCAAGCGTATACGTTAACATACCT CCCCGTCCTTGCTCGCCTTCGATCCCTTGGTTGTTCTTCTGGCTTCCGGC GGGATGAAAAACGAGCGCAGTCTAAGGATGTACAAGACGCGATCCAAAAG CTCACCGACAAGACTACGAAGACCATAGACGAGAAGGTTGCCGCCAAGGA GAAGGACATCCTCAAAGTGTAAACGTATCCACATCTACGTTATGTACGAG CTCTACGAAAGCAAGTGTAGAGACCGTCTGTCCCTAGATAGTCTACGATA GAGAAGTTGAGTACTTCATACTAGCGCGTACCGCCGCGCCATGGGCGATT TGTTGTGGTCTTCTTATTCATCTACAATTTGCCGCAGCTGGGCTCGAACC CACCCATTTCGGGGATGCCCACGGTAAAAACAATGGTGGCTGACGAGGTC GGTGCGGCGTGGGCGAAAATGTCTTGGTACGTTCGGGAATGGCAAGAAAA TTTACTTTCTAAAAATAGTGTTCCCGTGGGCGGACGACCACTCTTGAGTT CTACGAGGAGGATCCAAGAAGGAACATCCAACCAAGCGAGGGACGGTTTC CCTCCCTACTGTTGCTGAGCGGATGCATCGAAAGTGCAGGCTTTTTGCCC TGCGACGGGTAACATTCATTTGCGAAGTATTCGCGGGAGGTTGACAGCAG TTGCACGATCAATATGCACTAACACACACGCCACGTAGTATTTTTTTCCT TTCCACTGGCTTTGATTTGCATGCGTGGTTTTATCGCTACCTGTAAACGG GTTCAGCATCCCCTTCCTCGTCGTTATATAATGTGACCAATATGGATGCA AGCGGTTCGAGTAAGTGTAGAGAGGAACACACGAACACACTCACCTTGCT GTTCACAACGGTGTTGATTGACATTTCTTCTTCTAACGGGTATTATTGCA ATAAATTCATTGATTCCAGCAACGTATTATCTCGTGTGCCAAGCAATGTA GATGGTAGACCCGTAGCTAGCTGTAGAACTGTACTTACAGGTTCGGTTCG AAACCTCGTTTTTTGCTGACAAATGACACAATCAGTTAACAGAGCTTCTC GGCCGGAATTTGTTCGTTGTTCGTTTCACAGGCAGCAGGTACGG
back to top

Coding sequence (CDS) from alignment at Scaffold_54:70623..76066-

>EsuBft1476_8a-0001 ID=EsuBft1476_8a-0001|Name=EsuBft1476_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=756bp|location=Sequence derived from alignment at Scaffold_54:70623..76066- (Ectocarpus subulatus male Bft15b)
ATGAGGGCTTCTGTATTCACGGCTGCGGCTTCCGCGGCGGCGGTAGCCTT
GTGTTCCGGAGTGTCGGGGTTTGTCTTCGCACCGCCTCTGCCTGCAAAGC
GAGCTGGCGCACCGACGACGGGCAAAGCATCGGCGTGCGCATCCACGGCT
CCTCGCCTGAGATGGTCGTCGTCCTTGAAAATGGCTGCAGACGAATTCGA
CGGGGATGCGGTCCTGGCTTCGGCTCAGGAACGGATGGACAAATCGGTGG
AGAGCGTGCGGCTTAACCTCGAGACCCTCCGAACCGGGCGGGCAAACCCC
AAGATACTGGACCGCGTTGTGGTGGAGTGTTATGGGGCGGAGACGCCGCT
CAACCAGGTGGCCTCCGTGAAGACCACCAGCGCCACCGCGCTCTTGGTGG
AGTCATACGATCCGACTATCCTGGCCGACATCGCCGCCGCCATCCAAGAG
GCGGACTTGGGCCTTACTCCGAACAACGACGGCACCGTGATCCGGTTGAA
CATGCCGCCCGTGACGGAGGACCGCAGAAAGGAACTCGCGAAGGAGGCCA
AGAGCCTTGGGGAAGAGGGTAAGGTTGCGATTCGTAACATCAGGCGGGAG
GCTGTGGACACGGTGAAGAAGGCCGAAAAGGCCAAGAACTTGGGCAAGGA
CCAGTCTAAGGATGTACAAGACGCGATCCAAAAGCTCACCGACAAGACTA
CGAAGACCATAGACGAGAAGGTTGCCGCCAAGGAGAAGGACATCCTCAAA
GTGTAA
back to top