EsuBft1010_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1010_3a-0001 ID=EsuBft1010_3a-0001|Name=EsuBft1010_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2675bp|location=Sequence derived from alignment at Scaffold_54:1590..4891+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GGACAGAGACCACGAAAGATATGGACTTCGATGATGAGGACTCACAGGAG
TACAGAGACGTGCAGAGCACCCTTCCGGACGGATACACCATTCGCAAGGT
CGCCATCGACAGGAAAACCGCGCGCAAGTACCGTCTCACAATAGCCGTTA
CCTCTGCTGGTGATGCGGACCGGCTGAAGTGGCGCAGCCGATGGATCACA
AAGGGGAAACCGCGTGCGCGGCTGGCTTCTGCCGAGCGTGAGTGCATCGA
TGAGCTGTCGCTCTTGACATGGTTGGACCTTCAGGCAATGAGCGCTACTG
CTGAGGGTGTGCCAAGCGCACCTACGCGCGACGGCATGCTGCGAGATGCA
GCCCCAGAACCTGGTTCTCTCAAAGAACCTGGCGTTGGAGGCACACGGAA
GAGGCCGCGCAACGCATGTTGGGGTGGCACCAGAGAGGGCGCTGGACGAA
TGAAGGGGAGCGTCGGCAAGAGGGCCACACGGGAGCGAGCTATTGCCTTG
CGGCAGCAACTCACGCAGGCCATCCCCGACGCTTTTGAACTCTCCTGTTG
GCAGCTGGAGGAAGCCTTGGCAGTGTGGAAGGAGATCGAGCCTGAGCTTG
TCGACAAGGCCAGGAAGAAATTCCTGAACAAGGGGTACAGCCAATCGCAG
GCGCTGAAAAAGATGAAGCGCGCTCGAGATGCGGAAGCGAGGGTGGTGAT
GAGGGATGTGGTGGCCCACGATTTTCGTGAAGAGCAGCTGAAGTACTTTG
CGAAGGTCAGGAGGGACGCTGCGGTGGTCATCAGCGCATCAGCAGTCGAG
GAGGAGGATGATGTCCCTTCTGCAGCCAAGAGCCTGTCCAACTACCAGCG
AGGAGAGATTGTTGTGCATGCACTCACCTTGGCGGAACTGTACAGACAAC
AGAACGACGGCGTCGATCGCGAGACCGCTCTACAGATGGCGGCAGAGACG
GGATTTTGTACCCCCGACACCGTGCGCGAGTGGGAAAGAAGTTTCCTCGC
GCGCGGTCACATCAAGGTCTCTGCAGCGGGGCGCTTTCAGCGGAACTTTC
TCTTGGGGCTCGACAACAGCATACTCACCGAGTGCAAGGACTGGACGCGC
GCTTGGGGTGGGATACTCAAGGGACAGGCGAACAAAACAGCCGAGGACTT
CCGCCAGTTCGTCAACACCGACATCATGCCCAAGATTGAGGCGCTGATGA
CGCCTGACTACGACCCTTTCAAGGGGCTGCGAGTCAACCTGGTGGAAGTA
AAAAAGGGTGAGCCCAAGAAGCGACACATTTCGATTTGGACTGCAACAGC
GTGGCTAAAAAAGCTTGGGTGCGAGTACCACCAAGGCAAGGGTGGCTTGT
ACTTCGATGGGCACGATGACGAGAAGGTCTTGGAGTACCGAAACGACACG
TACCTTCCGGAGCTTTTCAAGACCCGCGACTACATGGAGGTTTGGATTCC
GATGGAGGAACGAGTGACGAGCAAGCTACGGTACGAGGACGGCAAGATGG
CGCTTCTCTGCTACCAGGACGAGAGCATCTTCAGAGCCAACGACGACCAA
AAAGCCGCGTGGTGGGCGCCAGACGTGCACGTGGTGAGGAAGAAATCGCC
CGGGCAGGGTATCATGGTGTCGGGAACCATCATTCACAACGTTGGATTCG
TCTCGGCCACGAAGCGGGAGATCAAGTCCGCCGAGCAGCTCCGCAGGAAG
CGTTGCAACGCCTCGGCTGCTGCAGCTAAGCGAGGGGAGAACGTGAAAGT
CGAGGTTTACCGGCGGATCGACAAGCTGTACGTCGACGAGGAAGGCAACT
ACTGGTCTTACCACCTCTTTGAGTATGGCAAGAACAAGGAGGGGTACTGG
ACTGGCCTCAAGATGCTCGACCACATGTCGGACGTCATCGACATGCTTGC
GATCAAGTACCCCAACCACAAACCAGTGGGGCTGTTCGACTGGTCGTCCT
GCCACGACTGCTTGGAGGAAGGCGCACCAACGGTGAAAAGGATGAACGTG
GGACACGGTGGGAAGAGGCAGGGAGAAGAGATCGCCGGGATGGATGCCGT
TACCCTGAGGGAAGACACCCCTAACCTCGGAAAGGGCTCCATCCAGCACT
TGGTTTTTCAACCAGGAGACGACCCCCCGATGTACGCTCCGCATCTAGCG
CCGGCGGAGTACGTAGGGAAGCTGAAAGGCATGCGGCAGATCTTGTGGGA
GAGGGGGCTCCTGAAGGACGGCATGAGCAAGTCGGGGGGCAGCGGCACGA
AGCAGGACCTCAGCATGAGCATGGAGCACGTCCTGGGCGAGCAGAAGGAC
TTTAAGGAAGTGGAGTCCAGCCTAGCGCTCCTGATGGCGCGCCACGGGGG
GTTCTGTATCATGCTCCCCAAGTACCACTGCGAGTGCAACCCCATAGAGC
TAGTTTGGGGCCGCGCCAAGGACTGGACACGCAAGCATTGCAACTACTCA
TTAGATGCACTGCGGGAAAACGTGCCGTTGAGCTTTAGAGTAGAGCCTGA
TAGGCAAGCCGTGGGAACGGTGCAGGCGTACTGCAAGAAGTCGTACACAC
ATAATTTGGTGTACCGTGATACGCGTGCTGTAGGGCCTGAGGGAGAGAAA
CACTACCAAACGTACAAATCGCACAGGCGCCCAGCACCATCTGAGTACAA
GCTCAAGGCTGCGAATGCCCCCTAA
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protein sequence of EsuBft1010_3a-0001

>EsuBft1010_3 ID=EsuBft1010_3|Name=EsuBft1010_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=884bp
MDFDDEDSQEYRDVQSTLPDGYTIRKVAIDRKTARKYRLTIAVTSAGDAD
RLKWRSRWITKGKPRARLASAERECIDELSLLTWLDLQAMSATAEGVPSA
PTRDGMLRDAAPEPGSLKEPGVGGTRKRPRNACWGGTREGAGRMKGSVGK
RATRERAIALRQQLTQAIPDAFELSCWQLEEALAVWKEIEPELVDKARKK
FLNKGYSQSQALKKMKRARDAEARVVMRDVVAHDFREEQLKYFAKVRRDA
AVVISASAVEEEDDVPSAAKSLSNYQRGEIVVHALTLAELYRQQNDGVDR
ETALQMAAETGFCTPDTVREWERSFLARGHIKVSAAGRFQRNFLLGLDNS
ILTECKDWTRAWGGILKGQANKTAEDFRQFVNTDIMPKIEALMTPDYDPF
KGLRVNLVEVKKGEPKKRHISIWTATAWLKKLGCEYHQGKGGLYFDGHDD
EKVLEYRNDTYLPELFKTRDYMEVWIPMEERVTSKLRYEDGKMALLCYQD
ESIFRANDDQKAAWWAPDVHVVRKKSPGQGIMVSGTIIHNVGFVSATKRE
IKSAEQLRRKRCNASAAAAKRGENVKVEVYRRIDKLYVDEEGNYWSYHLF
EYGKNKEGYWTGLKMLDHMSDVIDMLAIKYPNHKPVGLFDWSSCHDCLEE
GAPTVKRMNVGHGGKRQGEEIAGMDAVTLREDTPNLGKGSIQHLVFQPGD
DPPMYAPHLAPAEYVGKLKGMRQILWERGLLKDGMSKSGGSGTKQDLSMS
MEHVLGEQKDFKEVESSLALLMARHGGFCIMLPKYHCECNPIELVWGRAK
DWTRKHCNYSLDALRENVPLSFRVEPDRQAVGTVQAYCKKSYTHNLVYRD
TRAVGPEGEKHYQTYKSHRRPAPSEYKLKAANAP
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mRNA from alignment at Scaffold_54:1590..4891+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1010_3a-0001 ID=EsuBft1010_3a-0001|Name=EsuBft1010_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3302bp|location=Sequence derived from alignment at Scaffold_54:1590..4891+ (Ectocarpus subulatus male Bft15b)
GGACAGAGACCACGAAAGATATGGACTTCGATGATGAGGACTCACAGGAG
TACAGAGACGTGCAGAGCACCCTTCCGGACGGATACACCATTCGCAAGGT
CGCCATCGACAGGAAAACCGCGCGCAAGTACCGTCTCACAATAGCCGTTA
CCTCTGCTGGTGATGCGGACCGGCTGAAGTGGCGCAGCCGATGGATCACA
AAGGGGAAACCGCGTGCGCGGCTGGCTTCTGCCGAGCGTGAGTGCATCGA
TGAGCTGTCGCTCTTGACATGGTTGGACCTTCAGGCAATGAGCGCTACTG
CTGAGGGTGTGCCAAGCGCACCTACGCGCGACGGCATGCTGCGAGATGCA
GCCCCAGAACCTGGTTCTCTCAAAGAACCTGGCGTTGGAGGCACACGGAA
GAGGCCGCGCAACGCATGTTGGGGTGGCACCAGAGAGGGCGCTGGACGAA
TGAAGGGGAGCGTCGGCAAGAGGGCCACACGGGAGCGAGCTATTGCCTTG
CGGCAGCAACTCACGCAGGCCATCCCCGACGCTTTTGAACTCTCCTGTTG
GCAGCTGGAGGAAGCCTTGGCAGTGTGGAAGGAGATCGAGCCTGAGCTTG
TCGACAAGGCCAGGAAGAAATTCCTGAACAAGGGGTACAGCCAATCGCAG
GCGCTGAAAAAGATGAAGCGCGCTCGAGATGCGGAAGCGAGGGTGGTGAT
GAGGGATGTGGTGGCCCACGATTTTCGTGAAGAGCAGCTGAAGTACTTTG
CGAAGGTCAGGAGGGACGCTGCGGTGGTCATCAGCGCATCAGCAGTCGAG
GAGGAGGATGATGTGAGTTTTCATAAATGCAATTAAACTGCACAAAGTAC
TGCTGTACTGTACTGCTGAAGTACGGTTTGTAAACTTATGGGCATTACTG
CTGTGTGTTACTACACCGGTTGTTGCATGGTCAGCTGCTTTGTACACAGC
AGTGCATTCTCTCCCATGACTGTTGGCAGCGCGTGCCTCTGCCTGTGCTG
TGAAATCTTTTGCTGGGGCTAATTGCACTCGTCAAACTCCATTCTGCTTT
TATTTCACCGAACCAGGTCCCTTCTGCAGCCAAGAGCCTGTCCAACTACC
AGCGAGGAGAGATTGTTGTGCATGCACTCACCTTGGCGGAACTGTACAGA
CAACAGAACGACGGCGTCGATCGCGAGACCGCTCTACAGATGGCGGCAGA
GACGGGATTTTGTACCCCCGACACCGTGCGCGAGTGGGAAAGAAGTTTCC
TCGCGCGCGGTCACATCAAGGTCTCTGCAGCGGGGCGCTTTCAGCGGAAC
TTTCTCTTGGGGCTCGACAACAGCATACTCACCGAGTGCAAGGACTGGAC
GCGCGCTTGGGGTGGGATACTCAAGGGACAGGCGAACAAAACAGCCGAGG
ACTTCCGCCAGTTCGTCAACACCGACATCATGCCCAAGATTGAGGCGCTG
ATGACGCCTGACTACGACCCTTTCAAGGGGCTGCGAGTCAACCTGGTGGA
AGTAAAAAAGGGTGAGCCCAAGAAGCGACACATTTCGATTTGGACTGCAA
CAGCGTGGCTAAAAAAGCTTGGGTGCGAGTACCACCAAGGCAAGGGTGGC
TTGTACTTCGATGGGCACGATGACGAGAAGGTCTTGGAGTACCGAAACGA
CACGTACCTTCCGGAGCTTTTCAAGACCCGCGACTACATGGAGGTTTGGA
TTCCGATGGAGGTAGCTGAAGCGGAGACATGGGGTGTATCGACACGTCAC
GCGTGGGCGATTTCGACAGAACAGACGACGGCGGAGTGTGGGTCGGTGTT
GACGATCTGGAGCCAGTCTTGACGGACTTACCGAAATCGCTGCAGGAACG
AGTGACGAGCAAGCTACGGTACGAGGACGGCAAGATGGCGCTTCTCTGCT
ACCAGGACGAGAGCATCTTCAGAGGTAAATTCTACATTAGAAAATTGAAG
CTGGAGAAGAATGTATTCATATTGTCAGTAAAAATCATGTTGAATGTTTT
CGAATTCTGTCTTTTTTCGTGCTTCAAAAGTTACCTACGTCGCATGTGAG
TTATGGCTGGTTCGGAAATGAAGTTAATATTTTTTACAATGCCACCGTTA
AGTGTACCCCTTCTTGTCCCTTCGTTTCCCTCTACCCCGTATCTGTTCCC
TCTTTGACCGCAGCCAACGACGACCAAAAAGCCGCGTGGTGGGCGCCAGA
CGTGCACGTGGTGAGGAAGAAATCGCCCGGGCAGGGTATCATGGTGTCGG
GAACCATCATTCACAACGTTGGATTCGTCTCGGCCACGAAGCGGGAGATC
AAGTCCGCCGAGCAGCTCCGCAGGAAGCGTTGCAACGCCTCGGCTGCTGC
AGCTAAGCGAGGGGAGAACGTGAAAGTCGAGGTTTACCGGCGGATCGACA
AGCTGTACGTCGACGAGGAAGGCAACTACTGGTCTTACCACCTCTTTGAG
TATGGCAAGAACAAGGAGGGGTACTGGACTGGCCTCAAGATGCTCGACCA
CATGTCGGACGTCATCGACATGCTTGCGATCAAGTACCCCAACCACAAAC
CAGTGGGGCTGTTCGACTGGTCGTCCTGCCACGACTGCTTGGAGGAAGGC
GCACCAACGGTGAAAAGGATGAACGTGGGACACGGTGGGAAGAGGCAGGG
AGAAGAGATCGCCGGGATGGATGCCGTTACCCTGAGGGAAGACACCCCTA
ACCTCGGAAAGGGCTCCATCCAGCACTTGGTTTTTCAACCAGGAGACGAC
CCCCCGATGTACGCTCCGCATCTAGCGCCGGCGGAGTACGTAGGGAAGCT
GAAAGGCATGCGGCAGATCTTGTGGGAGAGGGGGCTCCTGAAGGACGGCA
TGAGCAAGTCGGGGGGCAGCGGCACGAAGCAGGACCTCAGCATGAGCATG
GAGCACGTCCTGGGCGAGCAGAAGGACTTTAAGGAAGTGGAGTCCAGCCT
AGCGCTCCTGATGGCGCGCCACGGGGGGTTCTGTATCATGCTCCCCAAGT
ACCACTGCGAGTGCAACCCCATAGAGCTAGTTTGGGGCCGCGCCAAGGAC
TGGACACGCAAGCATTGCAACTACTCATTAGATGCACTGCGGGAAAACGT
GCCGTTGAGCTTTAGAGTAGAGCCTGATAGGCAAGCCGTGGGAACGGTGC
AGGCGTACTGCAAGAAGTCGTACACACATAATTTGGTGTACCGTGATACG
CGTGCTGTAGGGCCTGAGGGAGAGAAACACTACCAAACGTACAAATCGCA
CAGGCGCCCAGCACCATCTGAGTACAAGCTCAAGGCTGCGAATGCCCCCT
AA
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Coding sequence (CDS) from alignment at Scaffold_54:1590..4891+

>EsuBft1010_3a-0001 ID=EsuBft1010_3a-0001|Name=EsuBft1010_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2655bp|location=Sequence derived from alignment at Scaffold_54:1590..4891+ (Ectocarpus subulatus male Bft15b)
ATGGACTTCGATGATGAGGACTCACAGGAGTACAGAGACGTGCAGAGCAC
CCTTCCGGACGGATACACCATTCGCAAGGTCGCCATCGACAGGAAAACCG
CGCGCAAGTACCGTCTCACAATAGCCGTTACCTCTGCTGGTGATGCGGAC
CGGCTGAAGTGGCGCAGCCGATGGATCACAAAGGGGAAACCGCGTGCGCG
GCTGGCTTCTGCCGAGCGTGAGTGCATCGATGAGCTGTCGCTCTTGACAT
GGTTGGACCTTCAGGCAATGAGCGCTACTGCTGAGGGTGTGCCAAGCGCA
CCTACGCGCGACGGCATGCTGCGAGATGCAGCCCCAGAACCTGGTTCTCT
CAAAGAACCTGGCGTTGGAGGCACACGGAAGAGGCCGCGCAACGCATGTT
GGGGTGGCACCAGAGAGGGCGCTGGACGAATGAAGGGGAGCGTCGGCAAG
AGGGCCACACGGGAGCGAGCTATTGCCTTGCGGCAGCAACTCACGCAGGC
CATCCCCGACGCTTTTGAACTCTCCTGTTGGCAGCTGGAGGAAGCCTTGG
CAGTGTGGAAGGAGATCGAGCCTGAGCTTGTCGACAAGGCCAGGAAGAAA
TTCCTGAACAAGGGGTACAGCCAATCGCAGGCGCTGAAAAAGATGAAGCG
CGCTCGAGATGCGGAAGCGAGGGTGGTGATGAGGGATGTGGTGGCCCACG
ATTTTCGTGAAGAGCAGCTGAAGTACTTTGCGAAGGTCAGGAGGGACGCT
GCGGTGGTCATCAGCGCATCAGCAGTCGAGGAGGAGGATGATGTCCCTTC
TGCAGCCAAGAGCCTGTCCAACTACCAGCGAGGAGAGATTGTTGTGCATG
CACTCACCTTGGCGGAACTGTACAGACAACAGAACGACGGCGTCGATCGC
GAGACCGCTCTACAGATGGCGGCAGAGACGGGATTTTGTACCCCCGACAC
CGTGCGCGAGTGGGAAAGAAGTTTCCTCGCGCGCGGTCACATCAAGGTCT
CTGCAGCGGGGCGCTTTCAGCGGAACTTTCTCTTGGGGCTCGACAACAGC
ATACTCACCGAGTGCAAGGACTGGACGCGCGCTTGGGGTGGGATACTCAA
GGGACAGGCGAACAAAACAGCCGAGGACTTCCGCCAGTTCGTCAACACCG
ACATCATGCCCAAGATTGAGGCGCTGATGACGCCTGACTACGACCCTTTC
AAGGGGCTGCGAGTCAACCTGGTGGAAGTAAAAAAGGGTGAGCCCAAGAA
GCGACACATTTCGATTTGGACTGCAACAGCGTGGCTAAAAAAGCTTGGGT
GCGAGTACCACCAAGGCAAGGGTGGCTTGTACTTCGATGGGCACGATGAC
GAGAAGGTCTTGGAGTACCGAAACGACACGTACCTTCCGGAGCTTTTCAA
GACCCGCGACTACATGGAGGTTTGGATTCCGATGGAGGAACGAGTGACGA
GCAAGCTACGGTACGAGGACGGCAAGATGGCGCTTCTCTGCTACCAGGAC
GAGAGCATCTTCAGAGCCAACGACGACCAAAAAGCCGCGTGGTGGGCGCC
AGACGTGCACGTGGTGAGGAAGAAATCGCCCGGGCAGGGTATCATGGTGT
CGGGAACCATCATTCACAACGTTGGATTCGTCTCGGCCACGAAGCGGGAG
ATCAAGTCCGCCGAGCAGCTCCGCAGGAAGCGTTGCAACGCCTCGGCTGC
TGCAGCTAAGCGAGGGGAGAACGTGAAAGTCGAGGTTTACCGGCGGATCG
ACAAGCTGTACGTCGACGAGGAAGGCAACTACTGGTCTTACCACCTCTTT
GAGTATGGCAAGAACAAGGAGGGGTACTGGACTGGCCTCAAGATGCTCGA
CCACATGTCGGACGTCATCGACATGCTTGCGATCAAGTACCCCAACCACA
AACCAGTGGGGCTGTTCGACTGGTCGTCCTGCCACGACTGCTTGGAGGAA
GGCGCACCAACGGTGAAAAGGATGAACGTGGGACACGGTGGGAAGAGGCA
GGGAGAAGAGATCGCCGGGATGGATGCCGTTACCCTGAGGGAAGACACCC
CTAACCTCGGAAAGGGCTCCATCCAGCACTTGGTTTTTCAACCAGGAGAC
GACCCCCCGATGTACGCTCCGCATCTAGCGCCGGCGGAGTACGTAGGGAA
GCTGAAAGGCATGCGGCAGATCTTGTGGGAGAGGGGGCTCCTGAAGGACG
GCATGAGCAAGTCGGGGGGCAGCGGCACGAAGCAGGACCTCAGCATGAGC
ATGGAGCACGTCCTGGGCGAGCAGAAGGACTTTAAGGAAGTGGAGTCCAG
CCTAGCGCTCCTGATGGCGCGCCACGGGGGGTTCTGTATCATGCTCCCCA
AGTACCACTGCGAGTGCAACCCCATAGAGCTAGTTTGGGGCCGCGCCAAG
GACTGGACACGCAAGCATTGCAACTACTCATTAGATGCACTGCGGGAAAA
CGTGCCGTTGAGCTTTAGAGTAGAGCCTGATAGGCAAGCCGTGGGAACGG
TGCAGGCGTACTGCAAGAAGTCGTACACACATAATTTGGTGTACCGTGAT
ACGCGTGCTGTAGGGCCTGAGGGAGAGAAACACTACCAAACGTACAAATC
GCACAGGCGCCCAGCACCATCTGAGTACAAGCTCAAGGCTGCGAATGCCC
CCTAA
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