Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1007_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 153 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1007_8a-0001 ID=EsuBft1007_8a-0001|Name=EsuBft1007_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1536bp|location=Sequence derived from alignment at Scaffold_519:230621..232357+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTGCAACTTATTCGGCACTTATTCGGCGATGACCTGTCACAGGCTAG
GAAGCTACCGCCATTGGAGCTGATGAGGAGCATCCTCACTGATAGCGCCA
AGAAGTTCGCCCACCGTTCCACCCTCGGCAATGGCACATGGACACCCTAT
GCTGCCGCGACGTTCGAAGATGAGAGGAAGAAGTCCGCCGGGTAAGTGAC
AAGAGTGGAGAATGAACGGCCGCGTTTGGGTTTTTCTGTGTATGGGTACG
TGCTCTTGTGGTTTCGAAGAGACAACCTAGTTCCTGGAGGACTCTCCTGT
ACTTGCACGGACGGGTGGTGGGTTGCCAACGGGTGGGTGTTCCATGACAT
GTTTCGAGGTGCACGCACGCCGCCGAGATTCACATGTACTCACATGCACG
CCTTCGCCACGCGACGTTCATTATTCCAGGCTCGTCGCCTCCCCCACGGG
CAACCAGTTCTGCACGGTCGAGAACACCAACCTCGCCACCCTCAACACCC
GCGGCAACAGGGTCCTGCTGAGGTGAGGCGAGCCGGGGCAGAAGATGGAG
TGGTCCTGCACATGCGGGTTCCCCGCGAGATTCCAAATCCCTTGCTGCAA
CGTCATTGCCGTGGCTGGAGTGGCGGGTCTTTTTGTTTGCTGTGTCTGTT
CATTTTAGTTGTTTTCTGCGTGGTTTTGTTTTTGTTTTCTTTATCTCTTT
TGTCCTGTCTTCCCCGGATAGTGTATTTTCTCCATCTTTGCGGAGTACCA
AGATGAACCAGGCGATGAACTACAAAATCTGGCCTGTGATTTTACCTTTT
TTTAGGCAGCGTAGCCTGTGACCACAGGAATCGCTCGGTCAAGTGTTTGA
TGACACAAGAAATAAGCGGTCTACGTTCGCGCACTTCCAGTTGAACGAAC
TAGGACCCTTTCTCGAAAGCGATTCACACACCCGCACCCGCAACGGCAGC
TTCGAGGTTGTGGTTACATGCGGTGCTCCGGCCACAATACGTGAAAGCCA
AAGTCTAACCGATGCCAATATGTCTTAATGTATTCCTTCTCATGCTCCAT
GATTGGAAAACAGGTGGCACGATACTTTACTTTCGGTCAGTCCGCCGTCG
CGCGTCAGTATCCCTTTCGGCCGCGGTCGGCAGAAACTAACCCACGCTTA
TTCACTCCTGTCATTTCCCTCTTCTGTCGCTGTCCATGTTGCTCCCTCCT
TCAATACACACCGAGGAGGACAAGATGGACGCTGTCATGACCCTCATGAA
CCCGGCCTATCGCCTCAAATACCACCGCCAGACCTACGGCGACGACGCGT
ACCAGGTCATGCTGCCTGTGGCATCCACGCTGGAGGAAGATGACACCCTG
CTACCTCTTCTCCCCATGGATGGTTAGGCCGGCGCTCCCAAGAAACTTGG
GCCGAAAAAGTTCAAGGGGATCGCGGGGCGCGGGGACAAGTACGCTTCGT
CGTCGTTCAACACGCGAGTTTCTGAACTCGGCCCGACTGCATCCGGAACC
ACGGCGGCTCCCTTTCTGTCGCAGGGGGGTGCCACG back to topprotein sequence of EsuBft1007_8a-0001 >EsuBft1007_8 ID=EsuBft1007_8|Name=EsuBft1007_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=64bp
MLQLIRHLFGDDLSQARKLPPLELMRSILTDSAKKFAHRSTLGNGTWTPY
AAATFEDERKKSAG back to topmRNA from alignment at Scaffold_519:230621..232357+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1007_8a-0001 ID=EsuBft1007_8a-0001|Name=EsuBft1007_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1737bp|location=Sequence derived from alignment at Scaffold_519:230621..232357+ (Ectocarpus subulatus male Bft15b)
ATGTTGCAACTTATTCGGCACTTATTCGGCGATGACCTGTCACAGGCTAG
GAAGCTACCGCCATTGGAGCTGATGAGGAGCATCCTCACTGATAGCGCCA
AGAAGTTCGCCCACCGTTCCACCCTCGGCAATGGCACATGGACACCCTAT
GCTGCCGCGACGTTCGAAGATGAGAGGAAGAAGTCCGCCGGGTAAGTGAC
AAGAGTGGAGAATGAACGGCCGCGTTTGGGTTTTTCTGTGTATGGGTACG
TGCTCTTGTGGTTTCGAAGAGACAACCTAGTTCCTGGAGGACTCTCCTGT
ACTTGCACGGACGGGTGGTGGGTTGCCAACGGGTGGGTGTTCCATGACAT
GTTTCGAGGTGCACGCACGCCGCCGAGATTCACATGTACTCACATGCACG
CCTTCGCCACGCGACGTTCATTATTCCAGGCTCGTCGCCTCCCCCACGGG
CAACCAGTTCTGCACGGTCGAGAACACCAACCTCGCCACCCTCAACACCC
GCGGCAACAGGGTCCTGCTGAGGTGAGGCGAGCCGGGGCAGAAGATGGAG
TGGTCCTGCACATGCGGGTTCCCCGCGAGATTCCAAATCCCTTGCTGCAA
CGTCATTGCCGTGGCTGGAGGTAAGCGATGTGCCTATTTAGTGGGCACAG
CAGTAGTCTTGTGGCCGAAAAAAACGATGAACGTGTTGCCAGGAGCCCTC
CAGTAGCACTCTGTGAGTGTGTTGTCGCGGAATCGATCGGATCACTTGCG
TGCTTAGTTGCGTGCTCACACGGCAAACCTGTTTTTGCGCTGCATGCTCT
GTCTTTGTCCTCTTGTCATAGTGGCGGGTCTTTTTGTTTGCTGTGTCTGT
TCATTTTAGTTGTTTTCTGCGTGGTTTTGTTTTTGTTTTCTTTATCTCTT
TTGTCCTGTCTTCCCCGGATAGTGTATTTTCTCCATCTTTGCGGAGTACC
AAGATGAACCAGGCGATGAACTACAAAATCTGGCCTGTGATTTTACCTTT
TTTTAGGCAGCGTAGCCTGTGACCACAGGAATCGCTCGGTCAAGTGTTTG
ATGACACAAGAAATAAGCGGTCTACGTTCGCGCACTTCCAGTTGAACGAA
CTAGGACCCTTTCTCGAAAGCGATTCACACACCCGCACCCGCAACGGCAG
CTTCGAGGTTGTGGTTACATGCGGTGCTCCGGCCACAATACGTGAAAGCC
AAAGTCTAACCGATGCCAATATGTCTTAATGTATTCCTTCTCATGCTCCA
TGATTGGAAAACAGGTGGCACGATACTTTACTTTCGGTCAGTCCGCCGTC
GCGCGTCAGTATCCCTTTCGGCCGCGGTCGGCAGAAACTAACCCACGCTT
ATTCACTCCTGTCATTTCCCTCTTCTGTCGCTGTCCATGTTGCTCCCTCC
TTCAATACACACCGAGGAGGACAAGATGGACGCTGTCATGACCCTCATGA
ACCCGGCCTATCGCCTCAAATACCACCGCCAGACCTACGGCGACGACGCG
TACCAGGTCATGCTGCCTGTGGCATCCACGCTGGAGGAAGATGACACCCT
GCTACCTCTTCTCCCCATGGATGGTTAGGCCGGCGCTCCCAAGAAACTTG
GGCCGAAAAAGTTCAAGGGGATCGCGGGGCGCGGGGACAAGTACGCTTCG
TCGTCGTTCAACACGCGAGTTTCTGAACTCGGCCCGACTGCATCCGGAAC
CACGGCGGCTCCCTTTCTGTCGCAGGGGGGTGCCACG back to topCoding sequence (CDS) from alignment at Scaffold_519:230621..232357+ >EsuBft1007_8a-0001 ID=EsuBft1007_8a-0001|Name=EsuBft1007_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=195bp|location=Sequence derived from alignment at Scaffold_519:230621..232357+ (Ectocarpus subulatus male Bft15b)
ATGTTGCAACTTATTCGGCACTTATTCGGCGATGACCTGTCACAGGCTAG
GAAGCTACCGCCATTGGAGCTGATGAGGAGCATCCTCACTGATAGCGCCA
AGAAGTTCGCCCACCGTTCCACCCTCGGCAATGGCACATGGACACCCTAT
GCTGCCGCGACGTTCGAAGATGAGAGGAAGAAGTCCGCCGGGTAA back to top
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