|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft98_14 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Length | 196 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft98_14a-0001 ID=EsuBft98_14a-0001|Name=EsuBft98_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1965bp|location=Sequence derived from alignment at Scaffold_510:142753..147917- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTTGAACGTGCCGAACGATAGGTCGCCCTCTCGTGCCTTCTTCTTCACAG CCGCCTTGACGGCCGCTGCGGTCTCGTGTCTCTCTCGGTCCACCTCGCGT TGCGAATGTGCTTTCTTCCGTATTTTGCGAGCGGCGACTTTCCTCGCATC AATCCATCTCTGCAGAGCTCGGTTCTTGCCTGTGGTGTTTTGACGAGGAG GGTGCAGCACTCCCTCCCCGCGGTGCCCGCGGTTGTCTCCCTTCTCCCGC GAGCGGTGCTTACTGACGTGGTGTTTCCGAATATCTCTACTCCTCCAGCT TCGTGGGCCACGCTTTCCGCCATGGTGGTTGCCAGGTGCAGTTTGCCGCT TTGCATTACTGCCGCGGGAACAGTGTCCATACACACCTCTCGCCACTACC ACCGTCTGGGCATCCTCACCGCCACGCTGAGCCAGCGCGGCGGTGAGTTG CACCTTGGGACACCACCCGCCTACTATCTGTTGTGTCCTGGTTCGCCCGC GAGGGACTCACTAGGTCGATTTCGGCCCCGGCCGGGGAGCAGGCCGAGGG GGGGTCAGGCGAAAGCGTTAGATCTGGAATACACGTCGTCGTCAACGGCG GAGGAGAGCGACTCTGCTATGTCAACGCTACCACCGTCACCATTAAGCGA TCCCCGTGTCACCGCGGCGCACGATCCAATCGCCGGCAGCACCGATGGCG CCCAGGTCAAATCGGCCCCACCGCCTCCGCCTACAGTACCCCCATCGCTA CCTGCGAGCGCGCACAATGGTGTTGCCGCCGCTGCCACCACTGACGGTAC GCGAGGAGAGAACACGGTGTCGGCTAAATATGCCAGGGAAGGACGAGTTG AAAAAACGACCCCTGGATTGGTGGAGAAGCTGAAACCACCGCCCAAGAGC ACAGAGAAGAAGGCTGAGCGAGCTCATGTCCGTGACGAGTTTTCGTTCCT CGCCAACAAAGAACGCCAGTTGGTGGCACGTCAAGACCGGTGGGCCGTGA CCCCTGACACCTGGAGATCGTGGGAGAGGCTCCGGCTGATCGTGAATCTG GGGTACACAAGTGTGGGCTCGCTTTGCCAGAACCAACGCTACGTCTACCA GGAGGTTGAGAACTGGATCAACGGTTCTCCGAAAAGTCAATTCCGGCGAT CTCGAACGCACTTCCTCAGAAAAGAATTGGCGAGCGGTGGCGGCGGTGCC ACAGAGGGCGCTGCTGTAGTCTGCGCTACACGTCCCGCCGCCGCCACTCC ACTTACGGACAGCACGGGGCATGCAAGCACCAAGATGCTGCTGCCGAGAT CCCTACCTTGTGCGCGGTCAAGCTCTACGAAAAAAGATGGTGGCAGAGCA AGGAAAAGTAGCGGCGCCAACGCCAACGCCCGCAGCAACCGCGACGGCCC TCAGGATGGTTCCGGGGCCACAGTTGTGAAACCGACCGGGTGCGCCAAGT TCAACAACCGCAACGGAGACGCCAAGCGGGGTAGGAGTGTGGCGGCACCA CAACAAGAGGACGTTGGCGGAAGACGTTCCTGTGCTTCGACGGGAAAAGC ACGGCGGAAGATTCAAGGGCGGGCGAGAGGCCATGCGGACGCTTCTGCCG GCGCCGGAAAGAAGAAAAACATGGGACCGGCCACCGAGAGAGCTGCAACT ACCATAGCGACGACGAAGGTGACCCTCACTGAACGTGAGCGACGGGTACG ATCGGAGTCTGAAGACCGGGGGGCCAAGAAACACGTCAGCTCGGCAGAGA ATGGCCGTCAACCGCGGATTGCAAGCTCTACGCTGAAGGCGACAATCTCA CGTCGGAAGAGACGAATATTTGAATCTGACGACGAAGAAGAGCACGCTGT GCATGCAACAACGGTGAACAAGGTTGTGCGCAAGGGTGGTGACAAGAGAG TGTGTGTGACCGCAGGAGCGTCCAAGGTTGGCAACGGCGGGATGGGACGC CGACCATTCCAATAA back to topprotein sequence of EsuBft98_14a-0001 >EsuBft98_14 ID=EsuBft98_14|Name=EsuBft98_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=619bp
MCFLPYFASGDFPRINPSLQSSVLACGVLTRRVQHSLPAVPAVVSLLPRA VLTDVVFPNISTPPASWATLSAMVVARCSLPLCITAAGTVSIHTSRHYHR LGILTATLSQRGGELHLGTPPAYYLLCPGSPARDSLGRFRPRPGSRPRGG QAKALDLEYTSSSTAEESDSAMSTLPPSPLSDPRVTAAHDPIAGSTDGAQ VKSAPPPPPTVPPSLPASAHNGVAAAATTDGTRGENTVSAKYAREGRVEK TTPGLVEKLKPPPKSTEKKAERAHVRDEFSFLANKERQLVARQDRWAVTP DTWRSWERLRLIVNLGYTSVGSLCQNQRYVYQEVENWINGSPKSQFRRSR THFLRKELASGGGGATEGAAVVCATRPAAATPLTDSTGHASTKMLLPRSL PCARSSSTKKDGGRARKSSGANANARSNRDGPQDGSGATVVKPTGCAKFN NRNGDAKRGRSVAAPQQEDVGGRRSCASTGKARRKIQGRARGHADASAGA GKKKNMGPATERAATTIATTKVTLTERERRVRSESEDRGAKKHVSSAENG RQPRIASSTLKATISRRKRRIFESDDEEEHAVHATTVNKVVRKGGDKRVC VTAGASKVGNGGMGRRPFQ back to topmRNA from alignment at Scaffold_510:142753..147917- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft98_14a-0001 ID=EsuBft98_14a-0001|Name=EsuBft98_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5165bp|location=Sequence derived from alignment at Scaffold_510:142753..147917- (Ectocarpus subulatus male Bft15b) GTTGAACGTGCCGAACGATAGGTCGCCCTCTCGTGCCTTCTTCTTCACAG
CCGCCTTGACGGCCGCTGCGGTCTCGTGTCTCTCTCGGTCCACCTCGCGT
TGCGAATGTGCTTTCTTCCGTATTTTGCGAGCGGCGACTTTCCTCGCATC
AATCCATCTCTGCAGAGCTCGGTTCTTGCCTGTGGTGTTTTGACGAGGAG
GGTGCAGCACTCCCTCCCCGCGGTGCCCGCGGTTGTCTCCCTTCTCCCGC
GAGCGGTGCTTACTGACGTGGTGTTTCCGAATATCTCTACTCCTCCAGCT
TCGTGGGCCACGCTTTCCGCCATGGTGGTTGCCAGGTGCAGTTTGCCGCT
TTGCATTACTGCCGCGGGAACAGTGTCCATACACACCTCTCGCCACTACC
ACCGTCTGGGCATCCTCACCGCCACGCTGAGCCAGCGCGGCGGTGAGTTG
CACCTTGGGACACCACCCGCCTACTATCTGTTGTGTCCTGGTTCGCCCGC
GAGGGACTCACTAGGTCGATTTCGGCCCCGGCCGGGGAGCAGGCCGAGGG
GGGGTCAGGTGTGTTCCCATGGGGAGATAGTATTACCCTATGCACCTCGT
GCGTTGTACTGAAAGCTTTCCGCACTTTCACCGTCTGTGCGTATGCGGGA
ACGCAAACATCGACGCGCCCCTACATGCACTACTATGTAACGGTCTGGCC
TAGAAAACTCTTGTTACGCAATCAGGCATCGCTCGCTTGACACCGTTGTC
GCTAGGTAAGAAAGCACCGTCGTCTCGAAGGGGTTGTGTCTAACCTACTT
CAATTTCCGGCTACGTTTCTTTCGCGGAACTGTTGTTTTCCTGTCTTTGT
TGTTGCTCGTCGGTGTCGTCGTTGTTGCTGGGCAGGAAACAAGTACCGCG
TGGCGGCCATCCGATCGCTCAGCATGACCACGGGGGCGCTGGCTCGCCAG
CTGAAAACAGCGAATGCTGCGACGGCTACGTTCAAACGTTTGGCACAGGC
GCAGGTGAAGCAAGGCAGAGAAGCAGCGGTAGTAGCAGCTGTGAAAATAG
ATCGATGTTTTCGAAGATTATAGCGTTGATGGATGGCTACCAGCAGAGAA
GCTATCTGTATGTTGGTAATCATCGCTGTCTTCGTCTCGAATCTATCGCC
TGTACTGCAACTGTACTCTTGGCGTTTTAAGGCGAAAGCGTTAGATCTGG
AATACACGTCGTCGTCAACGGCGGAGGAGAGCGACTCTGCTATGTCAACG
CTACCACCGTCACCATTAAGCGATCCCCGTGTCACCGCGGCGCACGATCC
AATCGCCGGCAGCACCGATGGCGCCCAGGTCAAATCGGCCCCACCGCCTC
CGCCTACAGTACCCCCATCGCTACCTGCGAGCGCGCACAATGGTGTTGCC
GCCGCTGCCACCACTGACGGTACGCGAGGAGAGAACACGGTGTCGGCTAA
ATATGCCAGGGAAGGACGAGTTGAAAAAACGACCCCTGGATTGGTGGTAT
GAGCTAAACGCGGCGCCGGTGAGTGTAGTCGGGGTACCTCTTGATTGGCT
CTTCTTTGTTACGACCCACCAAGTAAATCCTTTTTTTTCTTATGCTTGGG
TCTCTTGTTGGCCCACACCTGAGGGTAGGATGTGCAGATGTTCATGCTCT
TGCTTGCTTTATGGTATGGCACGATAGATTCTGCTTCTTTGGTGTTGTCG
CTACTTTCCCATATGGATGTCTTGGCGCCTACTTTCCGGTCAGAACAACA
CCGCCCTCACCCCCCCCACATCTTTGGCAGAGCTGTGGCATTGGTTGATC
CGGCAAAAGATTGGGTACGACAAGTGGACCGTCGTACACCTTGGTCCAGT
GGTCAGGCAGACTAGAGGTTCCTTTTCTCCCACCGAACCTGCATTTTCTG
TAAAAGAAGTGATGTCATCTTCGCTTCTGTTCCCGGGGGGGGGTTCCACT
AATGGCGTTGAAGGAGAAGCTGAAACCACCGCCCAAGAGCACAGAGAAGA
AGGCTGAGCGAGCTCATGTCCGTGACGAGTTTTCGTTCCTCGCCAACAAA
GAACGCCAGGTGCAACAACGTATCACGATGACTGACGTGTTTGTGATCCC
TTGATGGTATCAGGCTGTGGTTGTTGCATTCTCATCGCTGACATTGATTT
TCTGTTGAGCATTGCGAAAACAGTTGATGCTGTGAAGGAGTTTGCTCCTC
TACAATGTTCTTGAGTCTTGTGCCAGGGGCAGCAGCACCGGTTCATTTTG
GATGTTTTGGTTTGTTCGATGTACGGTACATGGGAACATTGTTTAGGCAG
AAACCATGGTGAACAATTGTGTGAAAGCCTGTTCGTAGACCTGTGTGAGA
AAATAATTAATAGGAGGAGGGGGTCGTGCCCTCGTCGGGCACACGACGAC
CGCAGGGCGCGGAACGTGCTTCAGGGTAGTCGCCCCACTTCTCCTGCGAA
AGATAAGGCCTGCCGCCTGGCCTTCGCGGCCTATTTTAGAGCAGCATGGC
AGAAGGCATGACAATCCTACCATCTCCGGATTTCCCGCCCCCTCCGCTTT
GGTGATCGGTCCTGTGGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTC
AATCGTCTAACCGCTAAGGCAAGCAAAACATGAAAGTACGCCCCCCCCCC
CCTCCGCTTTGTTTTCGTCCCCCCTCTATCCCTAGCACATATCCATGCCA
GGGCTAAGGTCTAGTTGCAGGAATGAATAGCAGGGCGCGGCCCTGGAGCG
AATTCGACCAAGTACACTTGCTAGGTTCACTTGGACAAACAGGAAGGCGC
CTGAAGCCGGCTCCAATCGCACAATTCCTCGAGCAAAAAACATGCCACGC
TGTCAAGTAAGCAATCGAAAGATTCCAAAGTTCACTCATTGTATCAACGC
GAGCTCCACTTGTGTTTGTTTAGGCCACATTTTGTGATCCTCGCATAACC
TGCAGCTCAGTATCCAGCCACGAGTCACATGGAAATTAGATAGGATTTAC
CCTACTTAGTTGGGCTAAGCGCGGGGAGACAGTGCTTGGGTTTCGGCGAC
GAGCATGATGCCATGTGAATATGTTCGGGTGGGTAAAAACCTCAATATCA
GATAGTTATACACGGCTTGTGCCATGGTTTATCTATTTACCGTTGTTAAC
CTGGTCTCCACCCCTCTTGTAATAGCCTGTGTCGCTTCTTGTTTATCAAC
AGGTACTTTCGCTCACTATCGACCACGCGGTGCACCTTTGCGTGGTTTAC
TCCTAGGGCAACGACACCAACATGGTAAACGTGCTCAATGGTGTTCAGCT
CAACGGTTTAGGGCTTACGGCAAAGGGTGCCCGAAGCGGAAGGGTGAGGA
AGTGGGAACACGTAGAGGGCTGGTTGGTGTGTTGTTCACAGGTTGTCGTT
ATTGGTTTTCGACGTTTTGTCGTTCGCTGTAGCAGCAGCATGTCGTTGAT
ATAATTGAAGGTTTTGGGGGCGTTGTGGCGGTCGTCGTGATGCTCGTGTC
TTGTGGGTCCTCATCTGGTGCTCTTCCTGGAGCTGCCGCCGCTATTGTCA
ACTACATCTTCGATGCGATGTCCAACAGTTTGCACGACCTTCCTCACGCC
TTGTCCCTCTTCCCCTTTACCCCTCTTCCCGAAGAAACGCTTGCGGAAGT
TGGTGGCACGTCAAGACCGGTGGGCCGTGACCCCTGACACCTGGAGATCG
TGGGAGAGGCTCCGGCTGATCGTGAATCTGGGGTACACAAGTGTGGGCTC
GCTTTGCCAGAACCAACGCTACGTCTACCAGGAGGTTGAGAACTGGATCA
ACGGTTCTCCGAAAAGGTAATGCACCCTCTTTTCTCTCTTATGCGTTTCG
GCTCGTTGGGTGCTTTGTTCACGAAGGGGTCGATTAAATAGTGACATTGA
TTCATGAAAAGTATGCTTTGGTCGTGGCAACGACATCCGCGTGGTGGCAA
CGGTTTCGGACGATTGCTGGTTCACGTACAAGGGCTTATTATTACTGTGT
GGTGGGTAACATCGATACTCGTCTGCACACCTGGTTGATGGAATATATTA
CTAGGTGTTCCCAAACTCGCGAACCAGACCAGACGTGCATCCTTTCTCAG
TCAATTCCGGCGATCTCGAACGCACTTCCTCGTACGTCCACAACAACATT
CCGCCGCCCCCTGTCCCCACCTCGTTTTGAAAGCAGCGAACGGTCATTTA
TCCTCGACTCCCTCATCGCCCTCCTCCGCTACCGACCCGCCCTTTCTAGA
TCAACACAACCCACCAAGACTCTGACATGGTGACCACAGCAGCAGAGAAA
AGAATTGGCGAGCGGTGGCGGCGGTGCCACAGAGGGCGCTGCTGTAGTCT
GCGCTACACGTCCCGCCGCCGCCACTCCACTTACGGACAGCACGGGGCAT
GCAAGCACCAAGATGCTGCTGCCGAGATCCCTACCTTGTGCGCGGTCAAG
CTCTACGAAAAAAGATGGTGGCAGAGCAAGGAAAAGTAGCGGCGCCAACG
CCAACGCCCGCAGCAACCGCGACGGCCCTCAGGATGGTTCCGGGGCCACA
GTTGTGAAACCGACCGGGTGCGCCAAGTTCAACAACCGCAACGGAGACGC
CAAGCGGGGTAGGAGTGTGGCGGCACCACAACAAGAGGACGTTGGCGGAA
GACGTTCCTGTGCTTCGACGGGAAAAGCACGGCGGAAGATTCAAGGGCGG
GCGAGAGGCCATGCGGACGCTTCTGCCGGCGCCGGAAAGAAGAAAAACAT
GGGACCGGCCACCGAGAGAGCTGCAACTACCATAGCGACGACGAAGGTGA
CCCTCACTGAACGTGAGCGACGGGTACGATCGGAGTCTGAAGACCGGGGG
GCCAAGAAACACGTCAGCTCGGCGTAACCGAAGTTGACGACGAAGATAGC
GACCTCGTGTTGGAAGCGACGGAAACTTGACTATGAACGGGACAGAGAGA
ATGGCCGTCAACCGCGGATTGCAAGCTCTACGCTGAAGGCGACAATCTCA
CGTCGGAAGAGACGAATATTTGAATCTGACGACGAAGAAGAGCACGCTGT
GCATGCAACAACGGTGAACAAGGTTGTGCGCAAGGGTGGTGACAAGAGAG
TGTGTGTGACCGCAGGAGCGTCCAAGGTTGGCAACGGCGGGATGGGACGC
CGACCATTCCAATAA back to topCoding sequence (CDS) from alignment at Scaffold_510:142753..147917- >EsuBft98_14a-0001 ID=EsuBft98_14a-0001|Name=EsuBft98_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1860bp|location=Sequence derived from alignment at Scaffold_510:142753..147917- (Ectocarpus subulatus male Bft15b) ATGTGCTTTCTTCCGTATTTTGCGAGCGGCGACTTTCCTCGCATCAATCC ATCTCTGCAGAGCTCGGTTCTTGCCTGTGGTGTTTTGACGAGGAGGGTGC AGCACTCCCTCCCCGCGGTGCCCGCGGTTGTCTCCCTTCTCCCGCGAGCG GTGCTTACTGACGTGGTGTTTCCGAATATCTCTACTCCTCCAGCTTCGTG GGCCACGCTTTCCGCCATGGTGGTTGCCAGGTGCAGTTTGCCGCTTTGCA TTACTGCCGCGGGAACAGTGTCCATACACACCTCTCGCCACTACCACCGT CTGGGCATCCTCACCGCCACGCTGAGCCAGCGCGGCGGTGAGTTGCACCT TGGGACACCACCCGCCTACTATCTGTTGTGTCCTGGTTCGCCCGCGAGGG ACTCACTAGGTCGATTTCGGCCCCGGCCGGGGAGCAGGCCGAGGGGGGGT CAGGCGAAAGCGTTAGATCTGGAATACACGTCGTCGTCAACGGCGGAGGA GAGCGACTCTGCTATGTCAACGCTACCACCGTCACCATTAAGCGATCCCC GTGTCACCGCGGCGCACGATCCAATCGCCGGCAGCACCGATGGCGCCCAG GTCAAATCGGCCCCACCGCCTCCGCCTACAGTACCCCCATCGCTACCTGC GAGCGCGCACAATGGTGTTGCCGCCGCTGCCACCACTGACGGTACGCGAG GAGAGAACACGGTGTCGGCTAAATATGCCAGGGAAGGACGAGTTGAAAAA ACGACCCCTGGATTGGTGGAGAAGCTGAAACCACCGCCCAAGAGCACAGA GAAGAAGGCTGAGCGAGCTCATGTCCGTGACGAGTTTTCGTTCCTCGCCA ACAAAGAACGCCAGTTGGTGGCACGTCAAGACCGGTGGGCCGTGACCCCT GACACCTGGAGATCGTGGGAGAGGCTCCGGCTGATCGTGAATCTGGGGTA CACAAGTGTGGGCTCGCTTTGCCAGAACCAACGCTACGTCTACCAGGAGG TTGAGAACTGGATCAACGGTTCTCCGAAAAGTCAATTCCGGCGATCTCGA ACGCACTTCCTCAGAAAAGAATTGGCGAGCGGTGGCGGCGGTGCCACAGA GGGCGCTGCTGTAGTCTGCGCTACACGTCCCGCCGCCGCCACTCCACTTA CGGACAGCACGGGGCATGCAAGCACCAAGATGCTGCTGCCGAGATCCCTA CCTTGTGCGCGGTCAAGCTCTACGAAAAAAGATGGTGGCAGAGCAAGGAA AAGTAGCGGCGCCAACGCCAACGCCCGCAGCAACCGCGACGGCCCTCAGG ATGGTTCCGGGGCCACAGTTGTGAAACCGACCGGGTGCGCCAAGTTCAAC AACCGCAACGGAGACGCCAAGCGGGGTAGGAGTGTGGCGGCACCACAACA AGAGGACGTTGGCGGAAGACGTTCCTGTGCTTCGACGGGAAAAGCACGGC GGAAGATTCAAGGGCGGGCGAGAGGCCATGCGGACGCTTCTGCCGGCGCC GGAAAGAAGAAAAACATGGGACCGGCCACCGAGAGAGCTGCAACTACCAT AGCGACGACGAAGGTGACCCTCACTGAACGTGAGCGACGGGTACGATCGG AGTCTGAAGACCGGGGGGCCAAGAAACACGTCAGCTCGGCAGAGAATGGC CGTCAACCGCGGATTGCAAGCTCTACGCTGAAGGCGACAATCTCACGTCG GAAGAGACGAATATTTGAATCTGACGACGAAGAAGAGCACGCTGTGCATG CAACAACGGTGAACAAGGTTGTGCGCAAGGGTGGTGACAAGAGAGTGTGT GTGACCGCAGGAGCGTCCAAGGTTGGCAACGGCGGGATGGGACGCCGACC ATTCCAATAA back to top
|