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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7FK49 |
| ProteomeId | EsuBft607_4 |
| Protein domains | PF13414 |
| Protein domains | IPR011990 |
| Protein domains | SSF48452 |
| Protein domains | IPR019734 |
| Protein domains | IPR013026 |
| Protein domains | PTHR23184 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | tetratricopeptide repeat protein 14 os:mus musculus gn:ttc14 pe:2 sv:2 [Automatic annotation] |
| Nb exon | 4 |
| Max annot lvl | 2759|Eukaryota |
| Length | 2614 |
| Hectar predicted targeting category | other localisation |
| Evalue | 8.5e-244 |
| EggNOG OGs | 28H66@1|root,2QPJ1@2759|Eukaryota |
| Ec32 ortholog description | Tetratricopeptide-like helical domain |
| Ec32 ortholog | Ec-04_005830.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Preferred name | TTC14 |
| KEGG ko | ko:K17908 |
| KEGG TC | 9.A.15.1 |
| KEGG Pathway | ko04136,ko04138,ko04140,map04136,map04138,map04140 |
| Description | TPR repeat |
| COG category | S |
| BRITE | ko00000,ko00001,ko02000,ko03029,ko04131 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0031227 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft607_4a-0001 ID=EsuBft607_4a-0001|Name=EsuBft607_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2614bp|location=Sequence derived from alignment at Scaffold_499:1144892..1149213- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATGACCAACACACAGCAATCGAAGAGCGGTAGCGGACAGCGAAGAGT GCATGGCATGATGAGGTCCATGCCTCTCGATGACGAGATTATTCGTCTGA AGCGAAAAGCGCGAGAGCGCGAAGAGAAACTAGGAAATCAGGCGAGTGGA AGGCTCGCCGATCCCCCGAACGGCGACGAGGAGGACGCCGGCGCCTCCGT CAACGAACATGCCGACACGTGGGGATTCTCCTGGATGCCCGCAATCGAAG ACTTTGTGGAGCAAGCGGCCGAGGCGCAGCAGCGAGACGAGGACGACAGC GAGGAAAGCAGCCCCTTGGGCGCGAATGACCGCTCAGATCCCGACGACGA AGAATCAAGTCTACGTGGACCGCCCACAAACACCACCATCCGCAGCAGCT TCTGCGATCCAACAAGTCCTAGCAGTGGAGCGGCTCAAAGCAGCAGCGGG TTGTCGCCAAGCGGGAGCTCCCTGCAGAGGGGTGGACGCAAGCGCAGGCG GCCACAAGCAGGCGGGGTGGCGACTTTGTCGTCGTCGTCGTCGTCGTCGT CTGCCCGTAGAAGAGCACCGCGACCGCCTTCTTACAACGAAACTCTGTTG GCCGATAAGTCTTTCCACAACCCACACGCCTCGGAAACCATGGCCGACGC CTTCGGCATACTACGACCGGCTTCGTTTGTGCTGGATGTTGGGGCGGACG ATCGCCCGTGGGGAGGCGCGGCGGGGGTTGCTGTAGCAGGAGCAAAAGGT GCGACCGCAGAGGGCGGGGAAGCCGATGTTACTGCTGGCACTGGCGGTGG TGAGGATAAGAACTGGTTTTACGACACAGTTCGAGATCGACAAAACCGGC TATGGGCTGACACAAGAGTTCGAAAGGGGGTGGAGCTGGCGAGAAAAGGT CAGCATCAGGCGGCTATCGACACATACACGCAGGCGTTGGGTATGTGTCC AGATCACGATGACGGACTAGTTGCCCGTGGGGCCGCCTTCGCCTCCACTG GCCGGCTGCGGCAAGCGGTGCAGGACCTGTCGCGAGCGCTGAGCGTTAAC CCCCAAAATGGGAACGCCTCCAGCTACCTGAAAGAGACGAGAAGACGAAT GGAGCGGCAGGAAGCAAGAGAGACACTGGGAGCGTCCGTGACTCTGGGCA ACATAACCACGTTCGAAAACCGAACAGATTCGAGCGTCAACGGCAGGAAG GGTCTCAATGGCGTATCTGCCCCGGGCGGTGCGGTGATGCCCGCGTCGAT GATGGGATCCGCTGGCAGCACCGAGCGCGATGAAGCATCAAAGGCCGCGC CGGGTGCCCTCCTTCACGATGGCGCGGAAGGAGACGCGCTCCGCAAGATG CGCGCGTTGCTCGAGGAGGACGAGAAGAAGCGCAAGCGTCGTGGTGCGCG GGGAGAAGGCCGCGGAGATGGTGACGGCGACGGCGAGGAGGGCAGTCGAA AGAAAAAGTCGCGCAAGAAGGACAAGAAGTCGTCGTCCAAGAGCAAGCGG AGCAGTTCCGGTCGCCACAGGAAGCGCGACAGACGAGAGAGCGGCGGCGG TGGCGGCAGCCGTCACGATAGCAGCAGCACCAGCACCAGCAGTGGAAACA GCAGTGCCGAAGACCCCGATGCGCGGAGCAGCAGCAGCAAGAAGAAGAAG AAGAAGCGGCACCTCAAGCGTAAGAAGCGCTCCTCGACCAAAGCGACCAC TACTGCCGCAGTAGGGTTCCGAAATGGAGGGAGTCGGGGCTTGGGGACTG GGGTCTCCATGACCGTATCCGCCGAGGGCCGAGAGGATTCGGAGGAAGAC GAAGCCCATCCCATCCTCCAACGGAAGAAGCACAGCCTCTGGGGTTGAGT TTGCTGCCTCGCCGCAGTTTAATCGCTGTTTGTTTCATCGGTACGCACTC GTAGCTTGTAGGCGATGTAGTGCTCACGGTACAAGCAGGACGAGAAGGCG TTGTTTTTTGCCCTTCGGTGCGGTGCCGCACACGCGAGCGTGCCCAACAT GGTCTGGCTGTGCCTTCGCGAGTGATCCACTTTTAGACGGGCGACAGTCG TGCCGGCGTTTGTCTATGTTGGGGCTGACGTACGGTGAAAGTCGTGCATG AAGCGGGATTTGGAGGAGTACCGAAGAATGTCTCGTGCAAGGGTACCGGA CATCGGAGGTATGCCTATGTAACTTGTCTCATACCGACACCAGGCTCGCC CCCCTAGTGGTTCTCTGAATGTTCCGCGTGATGAAATCAACTGGACGTAA ATGTTGGGGGAGTGCAGCTGTATAACAATAGCATCGACGGTGGGCGAGCT CCCTCAGACATACTCAAGTATCTCTTAGCGAATATGGACGTCCATGTCCA TGCCCGTGCAGTCGATTCATGTAGTTTTCGTACTTGGGAACAAAGCGCTG ATCTACCCCATGGCTATTTCATCGGTGGTCGGTCAAATGTTGTTGCGCGC GATAGAGAGTACGCGACACCAGGATATCGACGACATGTGCTCCACGTTGT TCCTGACTGCTAGCACAACGTAATGTTATTTTCAGGTTCTCTCTCTTTTC GTCTCGCTTTCTTCAGCCCTACAGGGCCGCCCTGTGGTCTAGAAGTATCC TCGGAAAGTTTGGA back to topprotein sequence of EsuBft607_4a-0001 >EsuBft607_4 ID=EsuBft607_4|Name=EsuBft607_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=615bp
MMTNTQQSKSGSGQRRVHGMMRSMPLDDEIIRLKRKAREREEKLGNQASG RLADPPNGDEEDAGASVNEHADTWGFSWMPAIEDFVEQAAEAQQRDEDDS EESSPLGANDRSDPDDEESSLRGPPTNTTIRSSFCDPTSPSSGAAQSSSG LSPSGSSLQRGGRKRRRPQAGGVATLSSSSSSSSARRRAPRPPSYNETLL ADKSFHNPHASETMADAFGILRPASFVLDVGADDRPWGGAAGVAVAGAKG ATAEGGEADVTAGTGGGEDKNWFYDTVRDRQNRLWADTRVRKGVELARKG QHQAAIDTYTQALGMCPDHDDGLVARGAAFASTGRLRQAVQDLSRALSVN PQNGNASSYLKETRRRMERQEARETLGASVTLGNITTFENRTDSSVNGRK GLNGVSAPGGAVMPASMMGSAGSTERDEASKAAPGALLHDGAEGDALRKM RALLEEDEKKRKRRGARGEGRGDGDGDGEEGSRKKKSRKKDKKSSSKSKR SSSGRHRKRDRRESGGGGGSRHDSSSTSTSSGNSSAEDPDARSSSSKKKK KKRHLKRKKRSSTKATTTAAVGFRNGGSRGLGTGVSMTVSAEGREDSEED EAHPILQRKKHSLWG back to topmRNA from alignment at Scaffold_499:1144892..1149213- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft607_4a-0001 ID=EsuBft607_4a-0001|Name=EsuBft607_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4322bp|location=Sequence derived from alignment at Scaffold_499:1144892..1149213- (Ectocarpus subulatus male Bft15b) ATGATGACCAACACACAGCAATCGAAGAGCGGTAGCGGACAGCGAAGAGT
GCATGGCATGATGAGGTCCATGCCTCTCGATGACGAGATTATTCGTCTGA
AGCGAAAAGCGCGAGAGCGCGAAGAGAAACTAGGAAATCAGGTGAGAGCC
CTCGTCGCTGGGTGTTCCCGTCCCACCAGAGAGGGCACACCGCACGGACT
AATCCACCCTCTGATGTCAACGGGTACCTCTGTCGTCGCTGCTGTTGGCA
AAGCACCAGCTTCAGCACCCTTTACGCGGCGGATAGTTGGATAGTTGTTG
TTGTGATGCTCTAAACGTGTTGGTCGCTTTCCCAGCGCAGGCAGCTGGCC
ATTCTGCCCCCAGGACAGGCGTTCGAGCACTGGTATGTAGTTTGCACCGC
ACAACCTTGTGACGGCGCCGATGCTGGTGGCAAGTTCCTTTCCGTTTTTG
CGTGCGTCAACCTTGTCGGTGACCTCCTGGTTACGTGGTTTCCACACTGC
TCTTGTGTCCATATCTGGTGCCTCTGTGTGTGGCCTGCATAGTCGGAAAG
GGTGTGAGAAGCTGTGTCAACTTGCGATACCCTCCAGAAACTTGCAGACC
CTACAGAGCACACTCTCTTGGTGTGCTTTGTGTGTTTACCCACCGGTAAG
GCAGCAGCAGTCCACAGGATAAACGGCTCCGCCTGCCGTGTTGGGGGTTA
CGTTGTAAGATTTGTCCAGTGTTTTTGCATTCAAATTTCTCTCTGCCTCT
CTGTCTCTCTGTCTCTTCCTTGCTGAACAAAAACGTTGAAGGCGAGTGGA
AGGCTCGCCGATCCCCCGAACGGCGACGAGGAGGACGCCGGCGCCTCCGT
CAACGAACATGCCGACACGTGGGGATTCTCCTGGATGCCCGCAATCGAAG
ACTTTGTGGAGCAAGCGGCCGAGGCGCAGCAGCGAGACGAGGACGACAGC
GAGGAAAGCAGCCCCTTGGGCGCGAATGACCGCTCAGATCCCGACGACGA
AGAATCAAGTCTACGTGGACCGCCCACAAACACCACCATCCGCAGCAGCT
TCTGCGATCCAACAAGTCCTAGCAGTGGAGCGGCTCAAAGCAGCAGCGGG
TTGTCGCCAAGCGGGAGCTCCCTGCAGAGGGGTGGACGCAAGCGCAGGCG
GCCACAAGCAGGCGGGGTGGCGACTTTGTCGTCGTCGTCGTCGTCGTCGT
CTGCCCGTAGAAGAGCACCGCGACCGCCTTCTTACAACGAAACTCTGTTG
GCCGATAAGTCTTTCCACAACCCACACGCCTCGGAAACCATGGCCGACGC
CTTCGGCATACTACGACCGGCTTCGTTTGTGCTGGATGTTGGGGCGGACG
ATCGCCCGTGGGGAGGCGCGGCGGGGGTTGCTGTAGCAGGAGCAAAAGGT
GCGACCGCAGAGGGCGGGGAAGCCGATGTTACTGCTGGCACTGGCGGTGG
TGAGGATAAGAACTGGTTTTACGACACAGTTCGAGATCGACAAAACCGGC
TATGGGCTGACACAAGAGTTCGAAAGGGGGTGGAGCTGGCGAGAAAAGGT
CAGCATCAGGTGAGGTTTTTCCCGGCCCGGTGCACCGTTTCATTTTCACT
TTGTTTTTATGTTACGGTAGCCTTTGTGCTATGGGTGTATGTGAGTGTGT
CCTTATAGGGGTGAGAGAGTGCGTTGGAGACGAAGCAAGTTGCAGCTGGA
AAAGTGGTGCTGCCTTGTTTTCCTCGGGGGTATTGTTATGGACCAAAGAA
CTCACGATTGCATGGGATCAGTCTGTGAACGCACTAGCAATGGCTCATAC
GCAACGCTCATCAGATCCTTGACAAACCCCTCCGAACATTACGGATTCCT
CGCGTATGAACTCTGTTGTGCCCAGGCGGCTATCGACACATACACGCAGG
CGTTGGGTATGTGTCCAGATCACGATGACGGACTAGTTGCCCGTGGGGCC
GCCTTCGCCTCCACTGGCCGGCTGCGGCAAGCGGTGCAGGACCTGTCGCG
AGCGCTGAGCGTTAACCCCCAAAATGGGAACGCCTCCAGCTACCTGAAAG
AGACGAGAAGGTGCGGGTGCCCCTCAACCTCTTTGCCTCTGTAGTGACCG
TGCAGCCTTGCATATCGCTGTGCTTGGCAACGACTCCTACGGTCAGATTG
TTGATAGGATCGCAATTGCTGTAGTGCATATTTCATGCTTGCCGGTAGCT
TTGCAGGTTCCGTTATTTGGAAGCACGCGTATGCGTGTTCTTTTCAAGCA
TGTACTGATAGATATGTCAGTTTCTGTTGTGCTCGATCGACTAGTTTCGA
ATTTGGCTGGCTACACGAAACGAGAGCTTGCTGTTGCCAAACTTCAATAG
TCTCGTTCTGGACCTGCCCACACTCATGTCTGGGTTCCCCAGCGTGTCGT
AGCCCTCCCAGTCTTATCAGATCATCTTTTGGTAATACTAGTTGACGAGA
TCATCTCATCAGCGGTACCAAGGATTTTGCCTTGCCCAACGTGCGACTCC
AACAAGTTACGATGACGCTTGATCCTGTGCTCGACGTCCTCCGTGTCGAC
TTCGCAGGGGTTCCGATGCTATGTCCCATTGAATGCGGCCATGGGTCACA
TTCCGTTTCGTGTTCCCTGCGTTGAGTTTACCTTATTGTTCGCTCCCCAG
GCAACGGTGTGTATCATATGCTTCTTTTGGAGGTGGTGTTATCCCGGATG
AGCTCCAGGCGTTAGGCTAAAGTACTGCTATGCTCTCGAACGCGTTCCTC
TCCCATTAACTGAATGTCTCTCGTGTTGCTTCTACCTCCTCCGCGAAAGC
AGACGAATGGAGCGGCAGGAAGCAAGAGAGACACTGGGAGCGTCCGTGAC
TCTGGGCAACATAACCACGTTCGAAAACCGAACAGATTCGAGCGTCAACG
GCAGGAAGGGTCTCAATGGCGTATCTGCCCCGGGCGGTGCGGTGATGCCC
GCGTCGATGATGGGATCCGCTGGCAGCACCGAGCGCGATGAAGCATCAAA
GGCCGCGCCGGGTGCCCTCCTTCACGATGGCGCGGAAGGAGACGCGCTCC
GCAAGATGCGCGCGTTGCTCGAGGAGGACGAGAAGAAGCGCAAGCGTCGT
GGTGCGCGGGGAGAAGGCCGCGGAGATGGTGACGGCGACGGCGAGGAGGG
CAGTCGAAAGAAAAAGTCGCGCAAGAAGGACAAGAAGTCGTCGTCCAAGA
GCAAGCGGAGCAGTTCCGGTCGCCACAGGAAGCGCGACAGACGAGAGAGC
GGCGGCGGTGGCGGCAGCCGTCACGATAGCAGCAGCACCAGCACCAGCAG
TGGAAACAGCAGTGCCGAAGACCCCGATGCGCGGAGCAGCAGCAGCAAGA
AGAAGAAGAAGAAGCGGCACCTCAAGCGTAAGAAGCGCTCCTCGACCAAA
GCGACCACTACTGCCGCAGTAGGGTTCCGAAATGGAGGGAGTCGGGGCTT
GGGGACTGGGGTCTCCATGACCGTATCCGCCGAGGGCCGAGAGGATTCGG
AGGAAGACGAAGCCCATCCCATCCTCCAACGGAAGAAGCACAGCCTCTGG
GGTTGAGTTTGCTGCCTCGCCGCAGTTTAATCGCTGTTTGTTTCATCGGT
ACGCACTCGTAGCTTGTAGGCGATGTAGTGCTCACGGTACAAGCAGGACG
AGAAGGCGTTGTTTTTTGCCCTTCGGTGCGGTGCCGCACACGCGAGCGTG
CCCAACATGGTCTGGCTGTGCCTTCGCGAGTGATCCACTTTTAGACGGGC
GACAGTCGTGCCGGCGTTTGTCTATGTTGGGGCTGACGTACGGTGAAAGT
CGTGCATGAAGCGGGATTTGGAGGAGTACCGAAGAATGTCTCGTGCAAGG
GTACCGGACATCGGAGGTATGCCTATGTAACTTGTCTCATACCGACACCA
GGCTCGCCCCCCTAGTGGTTCTCTGAATGTTCCGCGTGATGAAATCAACT
GGACGTAAATGTTGGGGGAGTGCAGCTGTATAACAATAGCATCGACGGTG
GGCGAGCTCCCTCAGACATACTCAAGTATCTCTTAGCGAATATGGACGTC
CATGTCCATGCCCGTGCAGTCGATTCATGTAGTTTTCGTACTTGGGAACA
AAGCGCTGATCTACCCCATGGCTATTTCATCGGTGGTCGGTCAAATGTTG
TTGCGCGCGATAGAGAGTACGCGACACCAGGATATCGACGACATGTGCTC
CACGTTGTTCCTGACTGCTAGCACAACGTAATGTTATTTTCAGGTTCTCT
CTCTTTTCGTCTCGCTTTCTTCAGCCCTACAGGGCCGCCCTGTGGTCTAG
AAGTATCCTCGGAAAGTTTGGA back to topCoding sequence (CDS) from alignment at Scaffold_499:1144892..1149213- >EsuBft607_4a-0001 ID=EsuBft607_4a-0001|Name=EsuBft607_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1848bp|location=Sequence derived from alignment at Scaffold_499:1144892..1149213- (Ectocarpus subulatus male Bft15b) ATGATGACCAACACACAGCAATCGAAGAGCGGTAGCGGACAGCGAAGAGT GCATGGCATGATGAGGTCCATGCCTCTCGATGACGAGATTATTCGTCTGA AGCGAAAAGCGCGAGAGCGCGAAGAGAAACTAGGAAATCAGGCGAGTGGA AGGCTCGCCGATCCCCCGAACGGCGACGAGGAGGACGCCGGCGCCTCCGT CAACGAACATGCCGACACGTGGGGATTCTCCTGGATGCCCGCAATCGAAG ACTTTGTGGAGCAAGCGGCCGAGGCGCAGCAGCGAGACGAGGACGACAGC GAGGAAAGCAGCCCCTTGGGCGCGAATGACCGCTCAGATCCCGACGACGA AGAATCAAGTCTACGTGGACCGCCCACAAACACCACCATCCGCAGCAGCT TCTGCGATCCAACAAGTCCTAGCAGTGGAGCGGCTCAAAGCAGCAGCGGG TTGTCGCCAAGCGGGAGCTCCCTGCAGAGGGGTGGACGCAAGCGCAGGCG GCCACAAGCAGGCGGGGTGGCGACTTTGTCGTCGTCGTCGTCGTCGTCGT CTGCCCGTAGAAGAGCACCGCGACCGCCTTCTTACAACGAAACTCTGTTG GCCGATAAGTCTTTCCACAACCCACACGCCTCGGAAACCATGGCCGACGC CTTCGGCATACTACGACCGGCTTCGTTTGTGCTGGATGTTGGGGCGGACG ATCGCCCGTGGGGAGGCGCGGCGGGGGTTGCTGTAGCAGGAGCAAAAGGT GCGACCGCAGAGGGCGGGGAAGCCGATGTTACTGCTGGCACTGGCGGTGG TGAGGATAAGAACTGGTTTTACGACACAGTTCGAGATCGACAAAACCGGC TATGGGCTGACACAAGAGTTCGAAAGGGGGTGGAGCTGGCGAGAAAAGGT CAGCATCAGGCGGCTATCGACACATACACGCAGGCGTTGGGTATGTGTCC AGATCACGATGACGGACTAGTTGCCCGTGGGGCCGCCTTCGCCTCCACTG GCCGGCTGCGGCAAGCGGTGCAGGACCTGTCGCGAGCGCTGAGCGTTAAC CCCCAAAATGGGAACGCCTCCAGCTACCTGAAAGAGACGAGAAGACGAAT GGAGCGGCAGGAAGCAAGAGAGACACTGGGAGCGTCCGTGACTCTGGGCA ACATAACCACGTTCGAAAACCGAACAGATTCGAGCGTCAACGGCAGGAAG GGTCTCAATGGCGTATCTGCCCCGGGCGGTGCGGTGATGCCCGCGTCGAT GATGGGATCCGCTGGCAGCACCGAGCGCGATGAAGCATCAAAGGCCGCGC CGGGTGCCCTCCTTCACGATGGCGCGGAAGGAGACGCGCTCCGCAAGATG CGCGCGTTGCTCGAGGAGGACGAGAAGAAGCGCAAGCGTCGTGGTGCGCG GGGAGAAGGCCGCGGAGATGGTGACGGCGACGGCGAGGAGGGCAGTCGAA AGAAAAAGTCGCGCAAGAAGGACAAGAAGTCGTCGTCCAAGAGCAAGCGG AGCAGTTCCGGTCGCCACAGGAAGCGCGACAGACGAGAGAGCGGCGGCGG TGGCGGCAGCCGTCACGATAGCAGCAGCACCAGCACCAGCAGTGGAAACA GCAGTGCCGAAGACCCCGATGCGCGGAGCAGCAGCAGCAAGAAGAAGAAG AAGAAGCGGCACCTCAAGCGTAAGAAGCGCTCCTCGACCAAAGCGACCAC TACTGCCGCAGTAGGGTTCCGAAATGGAGGGAGTCGGGGCTTGGGGACTG GGGTCTCCATGACCGTATCCGCCGAGGGCCGAGAGGATTCGGAGGAAGAC GAAGCCCATCCCATCCTCCAACGGAAGAAGCACAGCCTCTGGGGTTGA back to top
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