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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7FIA9 |
| ProteomeId | EsuBft363_5 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 250 |
| Hectar predicted targeting category | other localisation |
| Evalue | 5.2e-39 |
| EggNOG OGs | 2D5KK@1|root,2SYVY@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft363_5a-0001 ID=EsuBft363_5a-0001|Name=EsuBft363_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2502bp|location=Sequence derived from alignment at Scaffold_499:46733..50907+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCTTCGACTACGCCCAGGAGGACGAGAGGGAAGCGCTCGGCCGTAA ACTCAGGTGCTGGTGTCAGGGGTTCGGGAGGAGGGTCGGGGAGGAAGCGC GTACGACCCAGACCCAGAGCTCCAGGGGGGATTGGTCTACAAGCGCGAAG ATGGAGGCCCTCCTTCGCAAAGAGCAAGCAAATGCTGAAGCCGACGCCGA GGAGGCGCGAAAGGCGGCCAGGGCGGAGCCAGCCTTTGGTCCTGGACGCC AGACTCGAGGTGGGCAGAGGAGAAGAAGTGCAGTCGGGGGTGTAGGGAAG GAAAGCCGCAAGAAGATTTGCGGCAAGCCGGAGTGTGGATGGGTGCCGAC TGCCGCGGGTCACCAGTGCACTAGGTGTCCCGCGGGGGTTGTCCACTGGG CAAGAGATAGGCTGTGTACCGCATGCCATCAACGGGAAGACGGGAGTGGG TTCACGCACCTGTTGAACACCCGCATTGCCTCGGCCCGCCAACTTGTGGG CAACCTGCCGTCTGATGAGGCGGGGGTTGTACGTATGCTGCGAACGTACA ACCCTCAGTCTGGCCACTGTGTCTGCCGGCGAGACGGCTGCCTCATTTCC CGCCTGGGTCGCTACGAAAAGGGGAGGGCTACGCCAACATGTCAGGGTCC TGGGGACGGAAAGCCGTGTCAGGTCAAAGGAAAGTTTTGGGCGAAGCGGA AAAAGTATGCGGTGGCCGAGGATGGAGAAGGTGGGGAGGCGGGGGCGTCA ACGGGAGGCGGAGGTGTGCGGTGTCAGGCCTGCTATGTACAGCGGCGCCG CTCTTTCGATGTGTCTCGACTGACACGAGCGGCAGGGGATGACCGATCCG GTGTTGCACAAGCTTCCACCTTGTCGGTGGCGCCTGCCAGCGGGGGGGCG GACGTTGTGACTACCAGTGGCCAGAGGCAAGGGACAGTCGGGGGAGCGTC CACCGACGAGGGCTCTGGCGTTGCGGCTGCCCAGGCGCGTGTGCGAAAAG TCAAAGCGGCGTCGATTGTGTGCTCTCGTGTGGAAGGATCCGTTAGAGGC GGAGAGATCCTTTACTGGAAGGATGTCGCGGAGTGGCTGATGGCCGAGCG AGCTAAACTCGGCGAGGATGAACTTGTTGTCAGAGGAGATGGCCGCGAGA AGGCACTCTGCTTGTTCCCCAAGGATCTTCGGGACGAGGTTGTCGTTGGA TACCTCCCGCGGATGCGTGCGGCGGAGGCGGCGACTCTGAAGTCTGAGCT GGAACGGGTTGCCAAAGACCCTGCGCGTCCCCTCGACCCTGTCTGTCAGG AGCAGAGGATGGCGGTTGTCAAGACTGCGGGCGAGATTGTCCGGCGCGAT ATTGAACTGGAGAAGAGCCTGAGGAACGCGCCCGGCCCGGGGACGGCGAA CATCTACATGGAGCAGTTGGAGCGGCAGGTGGAGCCCACGGCGGAAACCT CTCCGATGCCCCCTACGGTGGTGGGGTTGTTCCAGAGCGTGATCGACGAG GACTTGACAGGCGAGCTAAACCCTGCGGAGCAGCCCAAGGTGAAGTCGAC CGACGACGCAGCGCCAGCGCCGTGCAAGGTGTGGGAGCGAGGGTGGCGAG ATGGGTTCAAGAAGAGCGTCGGTGACGCCACCGACGACTCCGCAGGCGGG TCGGACAACTGTGATTCTGAGCCCGGAGTCGGAGTGAGGCAGGGAGAAGG TCCGCATATCCCGTGTGTGGTGTGTGTGGCGTTATGGGCGGGGGCGGAGG TGGGCATGCTCGAGGACGCAAGCATGTTGAAGCGAATCCGCGATTTGAGT TTGGACGACATCCTCCTCGAATCTGACCCGGCGGAGGGAGAGCGGCGGTA TGGAGCTTTCTTCGCTACGCTCCTCGGCGCCGTGTCGAAGTCCGAGCGGA TGAGGTCGACGGAGGGCGGTCCGTTGTGGTGCTTCGAGGCCCAACTCAGG GAGGATATTTCGCTGGAGGTGAGGTCAAACACTACAGGGCGGTATGCTTT CATCCAACGCGCCAGCACCAAGAGCTACACCGAGATGAAGGGGATAATTG ACCGTATCCTTGGCATATGGCGCGGCACCGACGCAGGCAACGATGGAGCA CCGTGTATTATCGCCGGGGATGAGGAGACATACCGCTTCATATACCACCT CATGAAGCAGGGCCCCGATAACTACCGACAAATCCGACGGTATCCGGGAG ACTGGCATCTTCTGCTGCACATGGCCAAGGCTCTTCTCAAGCGGTACTGG GGGGCTGGTATCGAAATCGTGGCGTGTGGTTTGACTTTATGTGCGCCCTA ACGCCACACTCTAGCTGTCGCCTTGTCCGATGGTGATCCGTGAGTGTTTT GGTGTGTAGTCGTACGGGAATAATTGTTGTTTTTTTCATTTACAAATCGG CGAAGGAGTTAGTCCAAATAGTTTTGACCATTTACGAGATGTTCATCTGT GACTTATTCTGCTTCATTTTTTTTTCTTTATCATTTGTTGATATCTCATT GG back to topprotein sequence of EsuBft363_5a-0001 >EsuBft363_5 ID=EsuBft363_5|Name=EsuBft363_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=766bp
MAFDYAQEDEREALGRKLRCWCQGFGRRVGEEARTTQTQSSRGDWSTSAK MEALLRKEQANAEADAEEARKAARAEPAFGPGRQTRGGQRRRSAVGGVGK ESRKKICGKPECGWVPTAAGHQCTRCPAGVVHWARDRLCTACHQREDGSG FTHLLNTRIASARQLVGNLPSDEAGVVRMLRTYNPQSGHCVCRRDGCLIS RLGRYEKGRATPTCQGPGDGKPCQVKGKFWAKRKKYAVAEDGEGGEAGAS TGGGGVRCQACYVQRRRSFDVSRLTRAAGDDRSGVAQASTLSVAPASGGA DVVTTSGQRQGTVGGASTDEGSGVAAAQARVRKVKAASIVCSRVEGSVRG GEILYWKDVAEWLMAERAKLGEDELVVRGDGREKALCLFPKDLRDEVVVG YLPRMRAAEAATLKSELERVAKDPARPLDPVCQEQRMAVVKTAGEIVRRD IELEKSLRNAPGPGTANIYMEQLERQVEPTAETSPMPPTVVGLFQSVIDE DLTGELNPAEQPKVKSTDDAAPAPCKVWERGWRDGFKKSVGDATDDSAGG SDNCDSEPGVGVRQGEGPHIPCVVCVALWAGAEVGMLEDASMLKRIRDLS LDDILLESDPAEGERRYGAFFATLLGAVSKSERMRSTEGGPLWCFEAQLR EDISLEVRSNTTGRYAFIQRASTKSYTEMKGIIDRILGIWRGTDAGNDGA PCIIAGDEETYRFIYHLMKQGPDNYRQIRRYPGDWHLLLHMAKALLKRYW GAGIEIVACGLTLCAP back to topmRNA from alignment at Scaffold_499:46733..50907+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft363_5a-0001 ID=EsuBft363_5a-0001|Name=EsuBft363_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4175bp|location=Sequence derived from alignment at Scaffold_499:46733..50907+ (Ectocarpus subulatus male Bft15b) ATGGCCTTCGACTACGCCCAGGAGGACGAGAGGGAAGCGCTCGGCCGTAA
ACTCAGGTGCTGGTGTCAGGGGTTCGGGAGGAGGGTCGGGGAGGAAGCGC
GTACGACCCAGACCCAGAGCTCCAGGGGGGATTGGTCTACAAGCGTAAGT
GGAGGATAGATTAGCGGAGGCAGAGTTCGACGCGCAGCAGACGCAGGCGA
AGATGGAGGCCCTCCTTCGCAAAGAGCAAGCAAATGCTGAAGCCGACGCC
GAGGAGGCGCGAAAGGCGGCCAGGGCGGAGCCAGCCTTTGGTCCTGGACG
CCAGACTCGAGGTGGGCAGAGGAGAAGAAGTGCAGTCGGGGGTGTAGGGA
AGGAAAGCCGCAAGAAGATTTGCGGCAAGCCGGAGTGTGGATGGGTGCCG
ACTGCCGCGGGTCACCAGTGCACTAGGTGTCCCGCGGGGGTTGTCCACTG
GGCAAGAGATAGGCTGTGTACCGCATGCCATCAACGGGAAGACGGGAGTG
GGTTCACGCACCTGTTGAACACCCGCATTGCCTCGGCCCGCCAACTTGTG
GGCAACCTGCCGTCTGATGAGGCGGGGGTTGTACGTATGCTGCGAACGTA
CAACCCTCAGTCTGGCCACTGTGTCTGCCGGCGAGACGGCTGCCTCATTT
CCCGCCTGGGTCGCTACGAAAAGGGGAGGGCTACGCCAACATGTCAGGGT
CCTGGGGACGGAAAGCCGTGTCAGGTCAAAGGAAAGTTTTGGGCGAAGCG
GAAAAAGTATGCGGTGGCCGAGGATGGAGAAGGTGGGGAGGCGGGGGCGT
CAACGGGAGGCGGAGGTGTGCGGTGTCAGGCCTGCTATGTACAGCGGCGC
CGCTCTTTCGATGTGTCTCGACTGACACGAGCGGCAGGGGATGACCGATC
CGGTGTTGCACAAGCTTCCACCTTGTCGGTGGCGCCTGCCAGCGGGGGGG
CGGACGTTGTGACTACCAGTGGCCAGAGGCAAGGGACAGTCGGGGGAGCG
TCCACCGACGAGGGCTCTGGCGTTGCGGCTGCCCAGGCGCGTGTGCGAAA
AGTCAAAGCGGCGTCGATTGTGTGCTCTCGTGTGGAAGGATCCGTTAGAG
GCGGAGAGATCCTTTACTGGAAGGATGTCGCGGAGTGGCTGATGGCCGAG
CGAGCTAAACTCGGCGAGGATGAACTGTAGGACAAATGTATACGAGAGAA
GTGAAGCAGATGTTCGACAGCGTCGGCCGTCCGCCAGGCTGCAACGCGAG
AGTGGTTAGTATCCGATGGTGCAGTGTTGTCAGAGGAGATGGCCGCGAGA
AGGCACTCTGCTTGTTCCCCAAGGATCTTCGGGACGAGGTTGTCGTTGGA
TACCTCCCGCGGATGCGTGCGGCGGAGGCGGCGACTCTGAAGTCTGAGCT
GGAACGGGTTGCCAAAGACCCTGCGCGTCCCCTCGACCCTGTCTGTCAGG
AGCAGAGGATGGCGGTTGTCAAGACTGCGGGCGAGATTGTCCGGCGCGAT
ATTGAACTGGAGAAGAGCCTGAGGAACGCGCCCGGCCCGGGGACGGCGAA
CATCTACATGGAGCAGTTGGAGCGGCAGGTGAGGCATGCCACGGTAGGGG
TGCACAAAAAGGTGTCTGGCTGTCAAAGTGTTTGGAACCCTGTATGTATC
TACAATCCAACGGAGGGGGAATGTGAAAACACTGCTCGGTAGTATTTCGA
ACAACGAGTAAATTAAAGATCGAAAACAGAAATCTGACTTGGCCTTGTCG
AAATGTTTGGGTGACTCTTAGTTGCCTCTTACTTTTGAGAGGGTCTTTTT
GGGTGCCTCTTTGGTGCCCATTAACTTTAAGAGGGTTTGGGTCCGATATA
TTTCAGCTCACATTGTGCTATCGTGGCATGGCTCAGGTGGAGCCCACGGC
GGAAACCTCTCCGATGCCCCCTACGGTGGTGGGGTTGTTCCAGAGCGTGA
TCGACGAGGACTTGACAGGCGAGCTAAACCCTGCGGAGCAGCCCAAGGTG
AAGTCGACCGACGACGCAGCGCCAGCGCCGTGCAAGGTGTGGGAGCGAGG
GTGGCGAGATGGGTTCAAGAAGAGCGTCGGTGACGCCACCGACGACTCCG
CAGGCGGGTCGGTATGCGACACGACGGTAGGCTCTAGTGGTGGAGCCGGG
AGGAGTGGGGTGGGTGCAACATCGGGAGGGGGGTCGGTGCGCCCGGCGTC
GGAGACACATGCGAAGTATGTTGAGAAATTCAATCGTGGCTGCCGATCAT
GGTGAGTCTGTGTTGGCGGTGATGTGCACGAGCATGGTGAGTCTGTGTTG
GGTGGGCGGTACATGCCCTCCCATGCCATCAAGGCGACCCAGTGGGCGAA
GTCGAAAAAAAAACCTCGAGTCGTACTCGACTTTTTGGCAGAGCACTTGG
GGTGGGCCACCGATTCTCAAGTGTACCACCGAGAATCCAAGTTCGCCCGG
GCGGTAGAAGCCTCGAAGCTCCTTCCCAAGTGCGCGAAGTGCGCTGCCTT
TGCGCAGGACAACTGTGATTCTGAGCCCGGAGTCGGAGTGAGGCAGGGAG
AAGGTCCGCATATCCCGTGTGTGGTGTGTGTGGCGTTATGGGCGGGGGCG
GAGGTGGGCATGCTCGAGGACGCAAGCATGTTGAAGCGAATCCGCGATTT
GAGTTTGGACGACATCCTCCTCGAATCTGACCCGGCGGAGGGAGAGCGGC
GGTATGGAGCTTTCTTCGCTACGCTCCTCGGCGCCGTGTCGAAGTCCGAG
CGGATGAGGTCGACGGAGGGCGGTCCGTTGTGGTGCTTCGAGGCCCAACT
CAGGGAGGTGAGATTTTTTTACGTCATATCTACATGTTTTCTGTCTTTAC
TTAGTCCTTTCGCAAGGCCGTTTTACCAATTCAGGGTTGGTTGCTTCCGT
CATATCGAATTTGTATACCACATCGTTTCCCATTAAGTGTTGGCTGCCAA
AAGAAAAAAACGAATCCAGAAACAAACGAGGTGCATCTGGGGGTGGGGCA
ACAGCGTGTAGCCACAAGAACCACGAGGATACTCCAGCAGCAGGCAGGAA
GTATACTGGTGACGCTAGAATAGCACGCCTCGGAAGTTCTATGTGTGTGT
GTCTGTGTGTGAATGTATGTTTTTTTTTATCCTCCTAATATTGGACTCTG
TCGTCTAGCCCCACTGGCCCCTATCCTCCACTTAGACTAGCTACACGACC
AACCGGGGTCACGTAGGAGGGGGAGGCTGGACCCCCTCCTGCGGTATGTG
TGGTCTGTGTTTTTTTTTTTCTCTTTAATTTGTTGTATTTATATCTCTCT
ACCCGCCTTGTGTTGCTCGTACTGTACCTGTAGGATATTTCGCTGGAGGT
GAGGTCAAACACTACAGGGCGGTATGCTTTCATCCAACGCGCCAGCACCA
AGAGCTACACCGAGATGAAGGGGATAATTGACCGTATCCTTGGCATATGG
CGCGGCACCGACGCAGGCAACGATGGAGCACCGTGTATTATCGCCGGGGA
TGAGGAGACATACCGCTTCATATACCACCTCATGAAGCAGGGCCCCGATA
ACTACCGACAAATCCGACGGTATCCGGGAGACTGGCATCTTCTGCTGCAC
ATGGCCAAGGCTCTTCTCAAGCGGTACTGGGGGGCTGGTATCGAAATCGT
GGCGTGTGAGTTGGGAACAGACAACAGCAAATCGGGCGATGCCAGCAACT
ACCGCCGAGCCCACCACCATTTGTGCGTGATGTTCGAGGCCCTTTGGACG
GTCCACTGCGAAAGACGAACTTGGAGATTAGCTCGAATGATCAGGAAACG
GTCGGGGCGGTGTTGATTCTGAGACGAGGATAGGGACTACTGTCTTTTGA
AGGACACGGGGGGGGGGAGGGGCGCACCGATCCTGAGTGCCTGCTTCGAT
CGCTTTTTTTGTGGGCCGTCTCGTGGGTGCGAGCCTGCCGTATCTCAGGT
GGTTTGACTTTATGTGCGCCCTAACGCCACACTCTAGCTGTCGCCTTGTC
CGATGGTGATCCGTGAGTGTTTTGGTGTGTAGTCGTACGGGAATAATTGT
TGTTTTTTTCATTTACAAATCGGCGAAGGAGTTAGTCCAAATAGTTTTGA
CCATTTACGAGATGTTCATCTGTGACTTATTCTGCTTCATTTTTTTTTCT
TTATCATTTGTTGATATCTCATTGG back to topCoding sequence (CDS) from alignment at Scaffold_499:46733..50907+ >EsuBft363_5a-0001 ID=EsuBft363_5a-0001|Name=EsuBft363_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2301bp|location=Sequence derived from alignment at Scaffold_499:46733..50907+ (Ectocarpus subulatus male Bft15b) ATGGCCTTCGACTACGCCCAGGAGGACGAGAGGGAAGCGCTCGGCCGTAA ACTCAGGTGCTGGTGTCAGGGGTTCGGGAGGAGGGTCGGGGAGGAAGCGC GTACGACCCAGACCCAGAGCTCCAGGGGGGATTGGTCTACAAGCGCGAAG ATGGAGGCCCTCCTTCGCAAAGAGCAAGCAAATGCTGAAGCCGACGCCGA GGAGGCGCGAAAGGCGGCCAGGGCGGAGCCAGCCTTTGGTCCTGGACGCC AGACTCGAGGTGGGCAGAGGAGAAGAAGTGCAGTCGGGGGTGTAGGGAAG GAAAGCCGCAAGAAGATTTGCGGCAAGCCGGAGTGTGGATGGGTGCCGAC TGCCGCGGGTCACCAGTGCACTAGGTGTCCCGCGGGGGTTGTCCACTGGG CAAGAGATAGGCTGTGTACCGCATGCCATCAACGGGAAGACGGGAGTGGG TTCACGCACCTGTTGAACACCCGCATTGCCTCGGCCCGCCAACTTGTGGG CAACCTGCCGTCTGATGAGGCGGGGGTTGTACGTATGCTGCGAACGTACA ACCCTCAGTCTGGCCACTGTGTCTGCCGGCGAGACGGCTGCCTCATTTCC CGCCTGGGTCGCTACGAAAAGGGGAGGGCTACGCCAACATGTCAGGGTCC TGGGGACGGAAAGCCGTGTCAGGTCAAAGGAAAGTTTTGGGCGAAGCGGA AAAAGTATGCGGTGGCCGAGGATGGAGAAGGTGGGGAGGCGGGGGCGTCA ACGGGAGGCGGAGGTGTGCGGTGTCAGGCCTGCTATGTACAGCGGCGCCG CTCTTTCGATGTGTCTCGACTGACACGAGCGGCAGGGGATGACCGATCCG GTGTTGCACAAGCTTCCACCTTGTCGGTGGCGCCTGCCAGCGGGGGGGCG GACGTTGTGACTACCAGTGGCCAGAGGCAAGGGACAGTCGGGGGAGCGTC CACCGACGAGGGCTCTGGCGTTGCGGCTGCCCAGGCGCGTGTGCGAAAAG TCAAAGCGGCGTCGATTGTGTGCTCTCGTGTGGAAGGATCCGTTAGAGGC GGAGAGATCCTTTACTGGAAGGATGTCGCGGAGTGGCTGATGGCCGAGCG AGCTAAACTCGGCGAGGATGAACTTGTTGTCAGAGGAGATGGCCGCGAGA AGGCACTCTGCTTGTTCCCCAAGGATCTTCGGGACGAGGTTGTCGTTGGA TACCTCCCGCGGATGCGTGCGGCGGAGGCGGCGACTCTGAAGTCTGAGCT GGAACGGGTTGCCAAAGACCCTGCGCGTCCCCTCGACCCTGTCTGTCAGG AGCAGAGGATGGCGGTTGTCAAGACTGCGGGCGAGATTGTCCGGCGCGAT ATTGAACTGGAGAAGAGCCTGAGGAACGCGCCCGGCCCGGGGACGGCGAA CATCTACATGGAGCAGTTGGAGCGGCAGGTGGAGCCCACGGCGGAAACCT CTCCGATGCCCCCTACGGTGGTGGGGTTGTTCCAGAGCGTGATCGACGAG GACTTGACAGGCGAGCTAAACCCTGCGGAGCAGCCCAAGGTGAAGTCGAC CGACGACGCAGCGCCAGCGCCGTGCAAGGTGTGGGAGCGAGGGTGGCGAG ATGGGTTCAAGAAGAGCGTCGGTGACGCCACCGACGACTCCGCAGGCGGG TCGGACAACTGTGATTCTGAGCCCGGAGTCGGAGTGAGGCAGGGAGAAGG TCCGCATATCCCGTGTGTGGTGTGTGTGGCGTTATGGGCGGGGGCGGAGG TGGGCATGCTCGAGGACGCAAGCATGTTGAAGCGAATCCGCGATTTGAGT TTGGACGACATCCTCCTCGAATCTGACCCGGCGGAGGGAGAGCGGCGGTA TGGAGCTTTCTTCGCTACGCTCCTCGGCGCCGTGTCGAAGTCCGAGCGGA TGAGGTCGACGGAGGGCGGTCCGTTGTGGTGCTTCGAGGCCCAACTCAGG GAGGATATTTCGCTGGAGGTGAGGTCAAACACTACAGGGCGGTATGCTTT CATCCAACGCGCCAGCACCAAGAGCTACACCGAGATGAAGGGGATAATTG ACCGTATCCTTGGCATATGGCGCGGCACCGACGCAGGCAACGATGGAGCA CCGTGTATTATCGCCGGGGATGAGGAGACATACCGCTTCATATACCACCT CATGAAGCAGGGCCCCGATAACTACCGACAAATCCGACGGTATCCGGGAG ACTGGCATCTTCTGCTGCACATGGCCAAGGCTCTTCTCAAGCGGTACTGG GGGGCTGGTATCGAAATCGTGGCGTGTGGTTTGACTTTATGTGCGCCCTA A back to top
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