EsuBft903_7 (polypeptide) Ectocarpus subulatus male Bft15b

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEsuBft903_7a-0001
Unique NameEsuBft903_7
Typepolypeptide
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Sequence length715
Homology
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BLAST of EsuBft903_7a-0001 vs. uniprot
Match: A0A6H5L5M2_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M2_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 9.590e-109
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 
Query:    1 MFVLVLHIQLFPLHHTGLAFTGVTHRHSLQDTAPRQAATCSASGGLCGAPRTRRGRPRRLRAARIPFALEAHAPDGDAANDTELESGPRKRQQLGARPYRDSGVRAGDADSSTPPRQQRKSKTDKGGRQASMSMSQLKATLREAKQDGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ 184
            MFVLVLHIQLFPLHHTGLAFTGVTHRHSLQDTAPRQAATCSASGGLCGAPRTRRGRPRRLRAARIPFALEAHAPDGDAANDTELESGPRKRQQLGARPYRDSGVRAGDADSSTPPRQQRKSKTDKGGRQASMSMSQLKATLREAKQDGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ
Sbjct:    1 MFVLVLHIQLFPLHHTGLAFTGVTHRHSLQDTAPRQAATCSASGGLCGAPRTRRGRPRRLRAARIPFALEAHAPDGDAANDTELESGPRKRQQLGARPYRDSGVRAGDADSSTPPRQQRKSKTDKGGRQASMSMSQLKATLREAKQDGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ 184
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BLAST of EsuBft903_7a-0001 vs. uniprot
Match: D8LIH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH3_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 8.810e-74
Identity = 140/163 (85.89%), Postives = 141/163 (86.50%), Query Frame = 0 
Query:   22 GVTHRHSLQDTAPRQAATCSASGGLCGAPRTRRGRPRRLRAARIPFALEAHAPDGDAANDTELESGPRKRQQLGARPYRDSGVRAGDADSSTPPRQQRKSKTDKGGRQASMSMSQLKATLREAKQDGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ 184
            GV HRHS QDT P QAATC ASGGLCGAPRTRRG PRR RA RIPFALEAHAPDGDAAN  +LE G R RQQLGARPYRDSGVRAG A SS  PRQQRKSK DKGGRQA M MS LKATLREAKQ GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ
Sbjct:   39 GVAHRHSPQDTGPSQAATCGASGGLCGAPRTRRGHPRRPRAGRIPFALEAHAPDGDAANRKKLEGGSRNRQQLGARPYRDSGVRAGGAGSSALPRQQRKSKADKGGRQAGMPMSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ 201
[Close]
BLAST of EsuBft903_7a-0001 vs. uniprot
Match: A0A6H5L5M2_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M2_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 2.140e-108
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1 
Query:    1 MFVLVLHIQLFPLHHTGLAFTGVTHRHSLQDTAPRQAATCSASGGLCGAPRTRRGRPRRLRAARIPFALEAHAPDGDAANDTELESGPRKRQQLGARPYRDSGVRAGDADSSTPPRQQRKSKTDKGGRQASMSMSQLKATLREAKQDGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ 552
            MFVLVLHIQLFPLHHTGLAFTGVTHRHSLQDTAPRQAATCSASGGLCGAPRTRRGRPRRLRAARIPFALEAHAPDGDAANDTELESGPRKRQQLGARPYRDSGVRAGDADSSTPPRQQRKSKTDKGGRQASMSMSQLKATLREAKQDGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ
Sbjct:    1 MFVLVLHIQLFPLHHTGLAFTGVTHRHSLQDTAPRQAATCSASGGLCGAPRTRRGRPRRLRAARIPFALEAHAPDGDAANDTELESGPRKRQQLGARPYRDSGVRAGDADSSTPPRQQRKSKTDKGGRQASMSMSQLKATLREAKQDGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ 184
[Close]
BLAST of EsuBft903_7a-0001 vs. uniprot
Match: D8LIH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH3_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 1.630e-73
Identity = 140/163 (85.89%), Postives = 141/163 (86.50%), Query Frame = 1 
Query:   64 GVTHRHSLQDTAPRQAATCSASGGLCGAPRTRRGRPRRLRAARIPFALEAHAPDGDAANDTELESGPRKRQQLGARPYRDSGVRAGDADSSTPPRQQRKSKTDKGGRQASMSMSQLKATLREAKQDGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ 552
            GV HRHS QDT P QAATC ASGGLCGAPRTRRG PRR RA RIPFALEAHAPDGDAAN  +LE G R RQQLGARPYRDSGVRAG A SS  PRQQRKSK DKGGRQA M MS LKATLREAKQ GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ
Sbjct:   39 GVAHRHSPQDTGPSQAATCGASGGLCGAPRTRRGHPRRPRAGRIPFALEAHAPDGDAANRKKLEGGSRNRQQLGARPYRDSGVRAGGAGSSALPRQQRKSKADKGGRQAGMPMSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQ 201
The following BLAST results are available for this feature:
BLAST of EsuBft903_7a-0001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5M2_9PHAE9.590e-109100.00PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
D8LIH3_ECTSI8.810e-7485.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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BLAST of EsuBft903_7a-0001 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5M2_9PHAE2.140e-108100.00PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
D8LIH3_ECTSI1.630e-7385.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 360..472
e-value: 1.5E-37
score: 131.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 251..357
e-value: 2.9E-36
score: 126.5
coord: 117..250
e-value: 5.2E-34
score: 119.2
coord: 473..562
e-value: 1.1E-32
score: 114.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 563..715
e-value: 7.6E-42
score: 145.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 417..441
e-value: 0.0052
score: 16.9
coord: 596..619
e-value: 0.096
score: 13.0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 331..390
e-value: 2.5E-10
score: 40.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 661..694
e-value: 9.8E-5
score: 20.3
coord: 172..204
e-value: 1.8E-4
score: 19.5
coord: 147..169
e-value: 6.0E-5
score: 21.0
coord: 345..379
e-value: 9.6E-7
score: 26.6
coord: 520..554
e-value: 4.9E-9
score: 33.8
coord: 380..414
e-value: 1.1E-9
score: 35.8
coord: 625..659
e-value: 2.8E-6
score: 25.2
coord: 417..449
e-value: 0.0027
score: 15.7
coord: 275..308
e-value: 6.6E-6
score: 24.0
coord: 310..344
e-value: 1.6E-10
score: 38.5
coord: 596..624
e-value: 8.4E-4
score: 17.4
coord: 205..239
e-value: 6.4E-7
score: 27.2
coord: 241..274
e-value: 1.2E-5
score: 23.1
coord: 555..589
e-value: 1.4E-5
score: 23.0
coord: 485..519
e-value: 2.0E-8
score: 31.9
coord: 450..484
e-value: 4.5E-6
score: 24.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 447..495
e-value: 4.9E-12
score: 45.9
coord: 517..566
e-value: 1.4E-11
score: 44.4
coord: 622..669
e-value: 1.1E-9
score: 38.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 588..622
score: 9.930995
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 308..342
score: 13.285153
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 658..692
score: 9.624079
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 343..377
score: 12.967276
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 378..412
score: 13.054966
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 553..587
score: 10.764054
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 623..657
score: 12.024604
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 448..482
score: 11.871145
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 273..307
score: 11.871145
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 483..517
score: 12.210946
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 203..237
score: 12.024604
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..202
score: 10.314641
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 238..272
score: 11.081932
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 518..552
score: 12.791895
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 413..447
score: 11.136739
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 131..297
e-value: 8.2E-15
score: 54.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..96
NoneNo IPR availablePANTHERPTHR45613:SF354OS10G0368902 PROTEINcoord: 517..707
NoneNo IPR availablePANTHERPTHR45613:SF354OS10G0368902 PROTEINcoord: 249..526
NoneNo IPR availablePANTHERPTHR45613:SF354OS10G0368902 PROTEINcoord: 146..388
coord: 311..597
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 517..707
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 249..526
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 146..388
coord: 311..597

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_481contigScaffold_481:291912..294114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft903_7a-0001EsuBft903_7a-0001Ectocarpus subulatus male Bft15bmRNAScaffold_481 291912..294202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EsuBft903_7 ID=EsuBft903_7|Name=EsuBft903_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=715bp
MFVLVLHIQLFPLHHTGLAFTGVTHRHSLQDTAPRQAATCSASGGLCGAP
RTRRGRPRRLRAARIPFALEAHAPDGDAANDTELESGPRKRQQLGARPYR
DSGVRAGDADSSTPPRQQRKSKTDKGGRQASMSMSQLKATLREAKQDGDW
RKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERALELLASMAARGT
PPDVVTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIAYSSAISACR
KGGQWETAVDLLQEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEM
PTKGMVANIITYSIVIGACAKWGKWEEAVALLREMQEHGVAPDVITYSST
ISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKGGRWREAID
LLQEMQAHGVPPDVINYSAAIDACAQASQWEQALWLLREMPATGLIPNVI
SYNSAIDACAKTGRSKIAVDLLREMPAHGLAPDVITYSAVIASCAMGRQW
EEALGFFREMQGQGITPDVVSCNTAINACAQGGRWEEALDVLGEMPSMGL
TPDAISYRTAIDACAKGGRWNAMIDLLRKMPAVGLTPDAINYRFAMSACS
ADGLWEEALVLLRDMLAVGLSPDVVTYNSAINACAMDGRWKEATVLLRKM
PTFGLAPDVNSFNAAIDACGNGDQWGTAVDVLFEMRALGVFPNEVTYLTA
MYACERCGEKDDWMS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long