Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LBB5 |
| ProteomeId | EsuBft1006_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 33 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.06e-38 |
| EggNOG OGs | KOG0392@1|root,KOG0392@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG ko | ko:K15192 |
| Description | helicase activity |
| COG category | L |
| BRITE | ko00000,ko01000,ko03021 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1006_7a-0001 ID=EsuBft1006_7a-0001|Name=EsuBft1006_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=339bp|location=Sequence derived from alignment at Scaffold_472:49452..49909- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCCTTAGCGAACGTGTGCAACTCGTGGCCGGAGCGGCGACCTACCT
CTGCCACACGGCGTGGTACGCGCGGGTCTCCGCGGCCTCGTGCCTGGAGA
GCTTGGCGCGCCTGGAGTACGGCCAAGAAGAACCGTCCCGGGCAGCCAAA
GCGAAGGAGGGAGGTGGCGGCGGCGACGCGCTGACGGACGAGCTGGCGAG
GGGATGGGTCGGCCTTGGGGACGTCCGGCTTGCCGAGGTCTTGGAGAGGG
GGGCGCTGTTGCTGAGCCACGGAGAAGATGTGGGTGCTGTTGCGGGTGTT
GCTCTCGGGGAGTCTGGTGGCGCTGGCTCGTGGCGGTAG back to topprotein sequence of EsuBft1006_7a-0001 >EsuBft1006_7 ID=EsuBft1006_7|Name=EsuBft1006_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=112bp
MALSERVQLVAGAATYLCHTAWYARVSAASCLESLARLEYGQEEPSRAAK
AKEGGGGGDALTDELARGWVGLGDVRLAEVLERGALLLSHGEDVGAVAGV
ALGESGGAGSWR back to topmRNA from alignment at Scaffold_472:49452..49909- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1006_7a-0001 ID=EsuBft1006_7a-0001|Name=EsuBft1006_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=458bp|location=Sequence derived from alignment at Scaffold_472:49452..49909- (Ectocarpus subulatus male Bft15b)
ATGGCCCTTAGCGAACGTGTGTGCGTCGCCGTTGTTGCTCAGAACGAAGC
ACGCAGTGTGTCTAGCCCCTTTGAGTTTCTGGGCGCACGATCGCCGCTCC
TCGCAACGCCCCCACGAACGCCTGCTCGCCACGAAGCAGGCAACTCGTGG
CCGGAGCGGCGACCTACCTCTGCCACACGGCGTGGTACGCGCGGGTCTCC
GCGGCCTCGTGCCTGGAGAGCTTGGCGCGCCTGGAGTACGGCCAAGAAGA
ACCGTCCCGGGCAGCCAAAGCGAAGGAGGGAGGTGGCGGCGGCGACGCGC
TGACGGACGAGCTGGCGAGGGGATGGGTCGGCCTTGGGGACGTCCGGCTT
GCCGAGGTCTTGGAGAGGGGGGCGCTGTTGCTGAGCCACGGAGAAGATGT
GGGTGCTGTTGCGGGTGTTGCTCTCGGGGAGTCTGGTGGCGCTGGCTCGT
GGCGGTAG back to topCoding sequence (CDS) from alignment at Scaffold_472:49452..49909- >EsuBft1006_7a-0001 ID=EsuBft1006_7a-0001|Name=EsuBft1006_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=339bp|location=Sequence derived from alignment at Scaffold_472:49452..49909- (Ectocarpus subulatus male Bft15b)
ATGGCCCTTAGCGAACGTGTGCAACTCGTGGCCGGAGCGGCGACCTACCT
CTGCCACACGGCGTGGTACGCGCGGGTCTCCGCGGCCTCGTGCCTGGAGA
GCTTGGCGCGCCTGGAGTACGGCCAAGAAGAACCGTCCCGGGCAGCCAAA
GCGAAGGAGGGAGGTGGCGGCGGCGACGCGCTGACGGACGAGCTGGCGAG
GGGATGGGTCGGCCTTGGGGACGTCCGGCTTGCCGAGGTCTTGGAGAGGG
GGGCGCTGTTGCTGAGCCACGGAGAAGATGTGGGTGCTGTTGCGGGTGTT
GCTCTCGGGGAGTCTGGTGGCGCTGGCTCGTGGCGGTAG back to top
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